mRNA_L-elsbetiae_contig761.16530.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: D7G1J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI) HSP 1 Score: 306 bits (783), Expect = 1.350e-93 Identity = 155/165 (93.94%), Postives = 159/165 (96.36%), Query Frame = 1 Query: 22 AAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSGARRAGVQQEYSAEMLAAEINGVRQGVHGAD 516 AAEKTAGEVSLQGRKG M+LHPMTVNFDKK LDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLL+SGARRAG QQ+YS+EMLAAEINGVRQG G D Sbjct: 1035 AAEKTAGEVSLQGRKGAMYLHPMTVNFDKKALDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLRSGARRAGAQQDYSSEMLAAEINGVRQGGGGVD 1199
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A6H5KUI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI1_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.390e-53 Identity = 106/169 (62.72%), Postives = 108/169 (63.91%), Query Frame = 1 Query: 178 MTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQ-------------------------------------------------------SVSTLLKSGARRAGVQQEYSAEMLAAEINGVRQGVHGADG 519 MTTVTPLMLALFGGSLQVHHERQAITVD WLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQ SVSTLL+SGARRAG QQ+YS EMLAAEINGVRQG G DG Sbjct: 1 MTTVTPLMLALFGGSLQVHHERQAITVDSWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQARRNTNTRVATCAEDKANESRQPISMPNYIFPRHDPNPHPSIPVCDDIGGFNLPRSVSTLLRSGARRAGAQQDYSTEMLAAEINGVRQGGGGVDG 169
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S1UTW0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UTW0_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.200e-42 Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 1 Query: 13 GKGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLK 420 G G EK AGE + Q KG +LHP TV+F +++L+SRY YH++VKT K Y+RD TTV+ L LFGGSL+V+H R +T+D WL FR +AATLVK+LR MER+LL+KI +PQED+ S+ G+ LI++VSTLL+ Sbjct: 123 GAGRGEKEAGECAFQSAKGEAYLHPCTVSFSQRKLESRYCCYHDMVKTKKTYVRDCTTVSEFALLLFGGSLKVYHVRGIVTIDDWLKFRIGAKAATLVKHLRAQMERMLLKKILNPQEDITKSEEGKALIEAVSTLLE 260
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A835Z857_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA) HSP 1 Score: 159 bits (402), Expect = 6.310e-42 Identity = 91/218 (41.74%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 16 KGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHE--------------------------------------------------VVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSG---ARRAGVQQEYSAEMLAAEINGVRQGVHG 510 K A K AGE+ RKG +LHPM++NF++ +LDSRY VYHE +V+TSK+YIRD TTV+P LALFGG+L +HHE Q ++VD WLHFRA RR L+K LR +E +LL KI HPQ+DV+ GRD+I +VS LL+ AR G EY+ ++LA E++G+R G G Sbjct: 1456 KAPAPKKAGELMFSSRKGTSYLHPMSINFNEVDLDSRYAVYHEASTCNNFVNCSRTVAKQNVCLTVALIMCPFTTIGAADAAITRRVSMPDKQMVRTSKIYIRDCTTVSPFALALFGGTLVLHHEHQVLSVDGWLHFRAPRRVGALIKALRQQVEGVLLHKIAHPQDDVTALGRDVIGAVSRLLRRAGEDARLRGGHLEYTQDILAVEVSGMRVGASG 1673
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S1ZRQ7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRQ7_TRICV) HSP 1 Score: 149 bits (376), Expect = 1.170e-38 Identity = 80/173 (46.24%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 19 GAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLKSGARRAGVQQEYSAEML----AAEINGVRQGVHGADG 519 G ++KT GE + +KG ++LHP T++F++K+L SRY YHE+VKTSKVY+RD TTV+ L LFGG+L+V H + VD WL FR A + ATLVK+LR ME +LL+KI P +DV S G LIQ+VS LL+ R V +AE++ ++G +G H +G Sbjct: 513 GGSDKTVGECAFNSQKGDVYLHPCTISFNEKKLGSRYCCYHEIVKTSKVYVRDCTTVSEFALLLFGGNLKVFHTHGVVAVDDWLKFRIAAKPATLVKHLRAQMESMLLKKIVSPDDDVTASSEGMALIQAVSALLEKEVRE--VPDRSAAEIVKPWTGQSVDGGNRGGHSREG 683
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7R9YG42_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG42_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.100e-38 Identity = 80/143 (55.94%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 16 KGAAEKTAGEVSLQGRKGPMFLHPMTVNFDK--KELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRA-ARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLLKSGARR 435 K A K GEV+L+ KG M+LHP T+ F+ L SRY VYHE VKTSKVY+RD + P L LFGGSL VHHE Q IT+DKWLHFR +AATLVK+LR +E +LL+KIT P +V+D G LI++VS LL S + R Sbjct: 580 KNAPSKKVGEVALESVKGAMYLHPSTIGFNSVVSTLKSRYLVYHERVKTSKVYLRDASPADPFTLLLFGGSLDVHHEEQVITLDKWLHFRVPGLKAATLVKHLREQLEEVLLQKITQPSAEVTDLGIQLIEAVSALLSSASAR 722
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S1BMK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BMK3_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.720e-36 Identity = 67/143 (46.85%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 13 GKGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSD--NGRDLIQSVSTLLKSGARR 435 G A K AG+V KGP+ LHP T++F KK L RY YHE+VKTSKVY+RD T V + LFGG L++HH R + VD WL FR ++A +VK+LR ME++L KI P D+S NG+ LIQ +S +L+ +++ Sbjct: 87 GPSAGSKRAGDVPFNSLKGPVHLHPSTISFTKKRLGGRYCCYHEIVKTSKVYVRDCTPVNEFAILLFGGGLKLHHRRGIVVVDDWLKFRIPPKSAAVVKHLRTQMEKMLFEKIVRPDTDISGSTNGKLLIQVISRVLEVESKK 229
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S3QBY0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBY0_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.710e-36 Identity = 71/133 (53.38%), Postives = 96/133 (72.18%), Query Frame = 1 Query: 28 EKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLK 420 +K AG + Q KG +FLHP T++F +K+++SRY YHE+VKTSK Y RD T V+ L LFGG+L+V+H + IT+D+WL FR A + ATLVK+LR ME LLLRKI P+ED+ S G+ LIQ++STL + Sbjct: 1401 KKPAGTSAFQSLKGDVFLHPSTISFGEKKIESRYCCYHEIVKTSKTYARDATPVSKFALLLFGGNLKVYHAQGVITIDEWLKFRIAAKPATLVKHLRAQMENLLLRKIISPEEDIIESPEGKALIQAISTLFE 1533
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: B8C1N5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1N5_THAPS) HSP 1 Score: 140 bits (353), Expect = 2.040e-35 Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 31 KTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDV--SDNGRDLIQSVSTLLK 420 KTAGEV+ +G+ G ++LHP T+ F KELDSRY YHE++KTSKVY+RD TV L LFGG+L+V+ VD+WL FR + ATLVKYLR ME LLL KI +PQ DV S G+ +I +VS LLK Sbjct: 654 KTAGEVAFRGQMGEVYLHPCTIAFTAKELDSRYCCYHEIMKTSKVYVRDCCTVPKFALLLFGGALKVYQSHGVAAVDEWLKFRVQAKPATLVKYLRTSMESLLLEKIMNPQVDVTGSSKGKAVIDAVSALLK 785
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Match: A0A7S3UUP8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUP8_HETAK) HSP 1 Score: 138 bits (347), Expect = 8.500e-35 Identity = 64/129 (49.61%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 31 KTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVKTSKVYIRDMTTVTPLMLALFGGSLQVHHERQAITVDKWLHFRAARRAATLVKYLRVHMERLLLRKITHPQEDVSDNGRDLIQSVSTLL 417 K GE +L +G ++ HP + +F+ L +RY +YHE+VKTSKVYIRD TTV+P L LFGG L VHH+++ +TVD WLHFRAAR+ A L+++LR+ E +LL +I +P +VS GR+L+ + LL Sbjct: 368 KKVGEHALMSTRGAVYFHPCSASFEADGLSTRYIIYHEMVKTSKVYIRDGTTVSPFTLVLFGGELTVHHQQEVVTVDGWLHFRAARKTAALLRHLRLQTEAILLEQIANPDGEVSGKGRNLVMVLDALL 496 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig761.16530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig761.16530.1 >prot_L-elsbetiae_contig761.16530.1 ID=prot_L-elsbetiae_contig761.16530.1|Name=mRNA_L-elsbetiae_contig761.16530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp SKGGGKGAAEKTAGEVSLQGRKGPMFLHPMTVNFDKKELDSRYGVYHEVVback to top mRNA from alignment at L-elsbetiae_contig761:6249..10696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig761.16530.1 ID=mRNA_L-elsbetiae_contig761.16530.1|Name=mRNA_L-elsbetiae_contig761.16530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4448bp|location=Sequence derived from alignment at L-elsbetiae_contig761:6249..10696- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig761:6249..10696- >mRNA_L-elsbetiae_contig761.16530.1 ID=mRNA_L-elsbetiae_contig761.16530.1|Name=mRNA_L-elsbetiae_contig761.16530.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1044bp|location=Sequence derived from alignment at L-elsbetiae_contig761:6249..10696- (Laminarionema elsbetiae ELsaHSoW15)back to top |