prot_L-elsbetiae_contig7601.16520.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7601.16520.1
Unique Nameprot_L-elsbetiae_contig7601.16520.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length135
Homology
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BLAST of mRNA_L-elsbetiae_contig7601.16520.1 vs. uniprot
Match: D8LI98_ECTSI (Stc1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI98_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 8.200e-30
Identity = 105/136 (77.21%), Postives = 115/136 (84.56%), Query Frame = 0 
Query:    1 KLREGKIAEDKLRCKDCTLKAATAEREKAASKSSKGGSSGAEGKGEPLSCSVCK-RDLPTASFTNTQARKPDASRKCRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLKAASAECAREAE 135
            KLREGK+AEDK++CK+C  KAAT ERE+A S++SK  S+G EGK EPLSCS CK + LP +SFTNTQARKPDASRKCRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         ARLKAASAECAREAE
Sbjct:   34 KLREGKLAEDKVKCKECVAKAATEERERA-SQNSKASSNGGEGKDEPLSCSACKQKSLPRSSFTNTQARKPDASRKCRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPKGAAGAAARLKAASAECAREAE 168
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BLAST of mRNA_L-elsbetiae_contig7601.16520.1 vs. uniprot
Match: A0A6H5KHQ9_9PHAE (Stc1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ9_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 9.720e-24
Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = 0 
Query:    1 KLREGKIAEDKLRCKDCTLKAATAEREKAASKSSKGGSSGAEGKGEPLSCSVCKRD-LPTASFTNTQARKPDASRKCRD 78
            KLREGK+AEDK++CK+C  KAAT ERE+A S++SK  S+  EGK EPLSCSVCK+  LP +SFTNTQARKP+ SRKCRD
Sbjct:   53 KLREGKLAEDKVKCKECVAKAATEERERA-SENSKASSNDGEGKDEPLSCSVCKQKRLPRSSFTNTQARKPETSRKCRD 130
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7601.16520.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI98_ECTSI8.200e-3077.21Stc1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KHQ9_9PHAE9.720e-2469.62Stc1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..135
IPR024630Stc1 domainPFAMPF12898Stc1coord: 6..80
e-value: 4.7E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7601contigL-elsbetiae_contig7601:2864..4159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7601.16520.1mRNA_L-elsbetiae_contig7601.16520.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7601 2864..4159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7601.16520.1 ID=prot_L-elsbetiae_contig7601.16520.1|Name=mRNA_L-elsbetiae_contig7601.16520.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
KLREGKIAEDKLRCKDCTLKAATAEREKAASKSSKGGSSGAEGKGEPLSC
SVCKRDLPTASFTNTQARKPDASRKCRDCSAAAEAAEAEALRVARAAKMS
EAQAASAAATKLPKGAAGAAARLKAASAECAREAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024630Stc1