prot_L-elsbetiae_contig76.16507.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig76.16507.1
Unique Nameprot_L-elsbetiae_contig76.16507.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length314
Homology
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A6H5JA00_9PHAE (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA00_9PHAE)

HSP 1 Score: 375 bits (964), Expect = 1.980e-127
Identity = 243/338 (71.89%), Postives = 260/338 (76.92%), Query Frame = 0
Query:    1 MSSLSSSLCLSGRRSLLLGSRRSRALVRPVAAAAA--------AVAPQAAHG--------ISCSARRLFGTRSGAVRAATSWPVHSARRRQTRGEGALRLVPPEA--------PSWATRSTAFAGNS-RGMMSKASREGGEGXXXXXXXXXXXXXXXXXXQYDDADYEPEPEEKVSIVKTVAGVCLLGLVLAALGATVSELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKSALMKMLGQ 313
            MSSL+S L +SGRRS+LL +RR + LVRP AAA A        A AP    G         SCS     G R GA  +A+S P+   RRRQ  G   LR V   A        P WAT  T  AG+S RGMMSKASR+G + XXXXXXXXXXXXXXXXXX        PEPEEK+SIVKTVAG+C+LGLVLAALGATV+ELWPSHMAPQSIMSHAHD FQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVS+KMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEK+A  KMLGQ
Sbjct:    1 MSSLASVLRVSGRRSILLSARRGQQLVRPTAAARAQXXXXXXXAAAPFNTSGNFDASYTTTSCSPLSRIGAR-GATWSASSSPL-PFRRRQACG---LRWVQSTAVAHQQHRLPQWATAETFSAGSSKRGMMSKASRKGDDSXXXXXXXXXXXXXXXXXXXX----XXPEPEEKISIVKTVAGLCVLGLVLAALGATVTELWPSHMAPQSIMSHAHDVFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSNKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKNAFRKMLGQ 329          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: D8LCH3_ECTSI (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH3_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 6.420e-111
Identity = 182/208 (87.50%), Postives = 191/208 (91.83%), Query Frame = 0
Query:  106 MMSKASREGGEGXXXXXXXXXXXXXXXXXXQYDDADYEPEPEEKVSIVKTVAGVCLLGLVLAALGATVSELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKSALMKMLGQ 313
            MMSKASR+G +   XXXXXXXXXXXXXXXX        PEPEEK+SIVKTVAGVC+LGLV+AAL AT++ELWPSHMAPQSIMSHAHD FQADPDTANHFGTPLK YGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVS+KMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEK+A  KMLGQ
Sbjct:    1 MMSKASRKGDDSKGXXXXXXXXXXXXXXXXXX---XXXPEPEEKISIVKTVAGVCVLGLVVAALSATITELWPSHMAPQSIMSHAHDVFQADPDTANHFGTPLKGYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSNKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKNAFRKMLGQ 205          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A835YPG9_9STRA (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPG9_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.980e-49
Identity = 93/177 (52.54%), Postives = 115/177 (64.97%), Query Frame = 0
Query:  141 DYEPE-PEEKVSIVKTVAGVCLLGLVLAALGA----TVSELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKSALMKMLG 312
            D EPE P      +K  A + LL  +L  +G      V EL+P  ++P  + + A +A Q +PD ANHFGTPL  YGRD+   REGRR+FVEH +++   D SKR R+RFNVEGP+GHG  +AE S K+ SGEWVYL VQD  TGHVITL DNRAL+  +A A SD E  AL  MLG
Sbjct:   99 DDEPEGPRTTGQKMKEAAQMVLLLAILGVVGVCGYFVVQELFPGKLSPNGLFNRAFEAMQGEPDVANHFGTPLTAYGRDHGGTREGRRHFVEHEEYKAKEDGSKRMRIRFNVEGPYGHGFVFAEGSDKLPSGEWVYLMVQDSSTGHVITLQDNRALIYGRASATSDAEADALTNMLG 275          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: W7UCG1_9STRA (Mitochondrial import inner membrane translocase subunit Tim21 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCG1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.630e-38
Identity = 75/171 (43.86%), Postives = 109/171 (63.74%), Query Frame = 0
Query:  141 DYEPEPEEKVSIVKTVAGVCLLGLVLAALGATVSELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKSALMKML 311
            D  PE  EK+  ++ +A + +  +   +L   V EL PS M+   + + A D  +A+ +  N +G PLK YGRD    REGRRNFVEH ++    D SKR R+RFN+EGP GH   +AEV++ M  G+W+YL VQD+QTG V+TL DNRA+  A +++ S EE++AL  ++
Sbjct:  177 DDPPEEGEKIGFMRGLAYLTVAAIAAGSLYFIVDELMPSRMSANYLFNEAFDVVKANHEVLNRYGEPLKGYGRDGGGRREGRRNFVEHKNYVGE-DGSKRLRIRFNIEGPFGHAFVFAEVTADMPKGQWMYLLVQDMQTGRVMTLEDNRAMYEAMSKSASPEERAALQALI 346          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A7S2S5D3_9STRA (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5D3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.310e-37
Identity = 71/131 (54.20%), Postives = 88/131 (67.18%), Query Frame = 0
Query:  181 MAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEEKSALMKML 311
            M+P SI   A    +   D    FGTPLKVYGRD+  HREGRRNFVEH  +  P D S R RVRFNVEGPHG+   +AEVSS M SGE+VY+ VQD + G V+T+ DNR+ LMA+  AG++ E  A++  L
Sbjct:    3 MSPNSIFDKATQIVRDSTDVQRRFGTPLKVYGRDHGGHREGRRNFVEHTQYTCPEDGSDRVRVRFNVEGPHGNAFVFAEVSSSMSSGEFVYVLVQDKRNGRVMTVVDNRSALMAKKMAGANAEGQAVLANL 133          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A7S1YU89_TRICV (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YU89_TRICV)

HSP 1 Score: 141 bits (355), Expect = 7.700e-37
Identity = 70/129 (54.26%), Postives = 87/129 (67.44%), Query Frame = 0
Query:  175 ELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEE 303
            EL PS M+P ++   A D  + + D    FG PLK YGRD+  HREGRRNFVEH ++ D  D SKRTRVRFN+EG HG    +AEVSS M SGE+VY+ VQD + G V T+ DNR+ LMA+  AG  +E
Sbjct:   95 ELLPSKMSPNTVFDGAFDVIRENEDVKRRFGAPLKAYGRDHGGHREGRRNFVEHTEYTDKDDGSKRTRVRFNLEGQHGQAFVFAEVSSDMPSGEFVYVLVQDKRNGRVFTVIDNRSALMAKRMAGGSKE 223          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A7S0B1F1_9STRA (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B1F1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.290e-34
Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 0
Query:  175 ELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEE-KSALMKMLG 312
            EL P+ M+P ++   A +  + + D    FG PLK YGRD+  HREGRRNF+EH ++ D  D SKRTRVRFN+EG  G    +AEVSS M SGE+VY+ VQD   G V T+ DNR+ L A   AG ++E   AL  +LG
Sbjct:    1 ELLPTKMSPNAVFDRATELVRENGDVRRRFGEPLKAYGRDHGGHREGRRNFIEHTEYTDNEDGSKRTRVRFNLEGKFGKAFVFAEVSSNMASGEFVYILVQDKANGRVFTVLDNRSKLAAARMAGGNKEGMEALQNLLG 139          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A6S8YBJ7_9STRA (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8YBJ7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 9.130e-34
Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 0
Query:  173 VSELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEE-KSALMKMLG 312
            V EL P+ MAP S+ + A      +      FG P+KVYGR++  HREGRRNF+EH +  DP D SKRTRVRFN++G +G+   +AEVS  M S E+VYL VQD + G V+T+ DNR+ LM Q  AG D+  +  L  +LG
Sbjct:  108 VKELIPTKMAPNSVFNRASKVILENDQVKRRFGEPMKVYGREHGGHREGRRNFIEHSEFTDPDDGSKRTRVRFNLQGQYGNAFVFAEVSKDMASDEFVYLLVQDRRNGAVVTVIDNRSRLMTQRMAGGDKAGQDVLANLLG 248          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: A0A7S1GMX4_CYCTE (Mitochondrial import inner membrane translocase subunit Tim21 n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMX4_CYCTE)

HSP 1 Score: 128 bits (322), Expect = 1.900e-32
Identity = 64/129 (49.61%), Postives = 86/129 (66.67%), Query Frame = 0
Query:  175 ELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGSDEE 303
            EL+P+ M+P  + + A    + +P+    FG  LK YGRD+  HREGRRNF+EH ++ D +D SKRTRVRFN+ G  G    +AEVSS+M+SGE+VY+ VQD   G VIT+ DNRA L A   +G  +E
Sbjct:   55 ELFPTKMSPNVVFNKALAVVRENPEVKRRFGETLKGYGRDHGGHREGRRNFIEHTEYTDEVDGSKRTRVRFNLSGKFGQAFVFAEVSSQMKSGEFVYVLVQDKANGRVITVVDNRAALTAARLSGGSKE 183          
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Match: B7FRQ3_PHATC (Mitochondrial import inner membrane translocase subunit Tim21 n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRQ3_PHATC)

HSP 1 Score: 129 bits (325), Expect = 2.260e-32
Identity = 68/139 (48.92%), Postives = 91/139 (65.47%), Query Frame = 0
Query:  175 ELWPSHMAPQSIMSHAHDAFQADPDTANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGPHGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQA-GSDEEKSALMKMLG 312
            EL+P+ M+P  +   +  A +AD +    +G  LK YGRD+  HREGRRNF+EH ++ D  D SKRTRVR+N+EG  G    +AEVS+ M SGE+VY+ VQD   G V T+ DNRA L A   A GS E +SA+ ++LG
Sbjct:  102 ELFPTKMSPNRVFDRSFAAIRADSEVQRRYGDNLKAYGRDHGGHREGRRNFIEHTEYTDAEDGSKRTRVRYNLEGRFGTAFVFAEVSASMPSGEFVYILVQDKSNGRVHTVVDNRAALTAARLASGSKEAQSAMSQLLG 240          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig76.16507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA00_9PHAE1.980e-12771.89Mitochondrial import inner membrane translocase su... [more]
D8LCH3_ECTSI6.420e-11187.50Mitochondrial import inner membrane translocase su... [more]
A0A835YPG9_9STRA3.980e-4952.54Mitochondrial import inner membrane translocase su... [more]
W7UCG1_9STRA2.630e-3843.86Mitochondrial import inner membrane translocase su... [more]
A0A7S2S5D3_9STRA6.310e-3754.20Mitochondrial import inner membrane translocase su... [more]
A0A7S1YU89_TRICV7.700e-3754.26Mitochondrial import inner membrane translocase su... [more]
A0A7S0B1F1_9STRA1.290e-3449.64Mitochondrial import inner membrane translocase su... [more]
A0A6S8YBJ7_9STRA9.130e-3448.94Mitochondrial import inner membrane translocase su... [more]
A0A7S1GMX4_CYCTE1.900e-3249.61Mitochondrial import inner membrane translocase su... [more]
B7FRQ3_PHATC2.260e-3248.92Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013261Mitochondrial import inner membrane translocase subunit Tim21PFAMPF08294TIM21coord: 154..288
e-value: 7.2E-10
score: 38.9
IPR013261Mitochondrial import inner membrane translocase subunit Tim21PANTHERPTHR13032FAMILY NOT NAMEDcoord: 162..289
NoneNo IPR availablePANTHERPTHR13032:SF6MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM21coord: 162..289
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 25..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..313
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 37..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig76contigL-elsbetiae_contig76:18428..22060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig76.16507.1mRNA_L-elsbetiae_contig76.16507.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig76 18395..22526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig76.16507.1 ID=prot_L-elsbetiae_contig76.16507.1|Name=mRNA_L-elsbetiae_contig76.16507.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=314bp
MSSLSSSLCLSGRRSLLLGSRRSRALVRPVAAAAAAVAPQAAHGISCSAR
RLFGTRSGAVRAATSWPVHSARRRQTRGEGALRLVPPEAPSWATRSTAFA
GNSRGMMSKASREGGEGDGGGASSSKDGEGNRGEEQYDDADYEPEPEEKV
SIVKTVAGVCLLGLVLAALGATVSELWPSHMAPQSIMSHAHDAFQADPDT
ANHFGTPLKVYGRDNNRHREGRRNFVEHVDHEDPIDKSKRTRVRFNVEGP
HGHGMAYAEVSSKMESGEWVYLCVQDLQTGHVITLHDNRALLMAQAQAGS
DEEKSALMKMLGQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013261Tim21