prot_L-elsbetiae_contig76.16506.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig76.16506.1
Unique Nameprot_L-elsbetiae_contig76.16506.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length669
Homology
BLAST of mRNA_L-elsbetiae_contig76.16506.1 vs. uniprot
Match: D7FX96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX96_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 9.330e-103
Identity = 357/714 (50.00%), Postives = 401/714 (56.16%), Query Frame = 0
Query:    1 MNHDIHGGDTPADDFDLWWG-----------AGPTRNEEQHHTNHLGDMSSGIGSSTPAPSAATHGGSSXXXXXXXXXGSLNPTTSTLMGSLWSSGGAPHLEAYGHRHHVHGSQGED----------GVHGSSSPPSASSRRAWLPPPGQH-HQHSTISTDGAASPSNRIGQAVVGDVAAAXXXXXXXXXXXXSLSQPTA-------GMNSSRTGDSSISGNNVDHKLEELAAAITASVLGKLDTGVWEALATGQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------VAPLRSRLAALEEQTSRLMARSSAGNGDGGDTSRGGRATSGGVGGXXXXXXXXXXXXXXX---AEPLLALNALAQRTGTLEGRHKQVQAKVALLDNAFGPKASDWAQTIKAFIQER--EATAGGGGRAVAVAVRPTGGGGSCSGSKGGRKPLAIDAPVFSPQSA--RDISRGCGKGNNAYGGAGAAAGSP-----VVVAGARRVESAPEILRAAQGGDAAVAGAAVASEAATAGVREGAVDKGCAACAQTRERCSRLEQRLAKSERTLSLLQGRTAAVAXXXXXXXXXXXXXDAVKAWEVEEGSRRDAAVEKAVSSDVLGRQQKAMAAGGGGNWASKASLEKLASELRQLSARAKDGEDTLALVDHGLKGVREEMAPLSGSVSVLKRLVETHLREKEQAAELLKGYVTTITREV 663
            MN  ++GGD PADDFDL+WG           +G   N E      L D++SG      +P   T  GSS         G+LN  T TLMGSLWS    P  EAYGH  HVH SQ E            +HG S                   HQHS    DG    S +  Q +                     ++PTA       G N   TG   +SG+ V++KLEELAA ITASV+GKL+  V EAL  G QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          VAPLRSRLAALEEQ  RL A S +G+G  GD   GGR T  GV G     XXXXXXXXX    AEP+ AL ALAQRTGTLEGRHKQ+QAKVALLDN+FGPKASDWAQTIKAF+QER  E  AG  GRA AV V   G        KGG++ L IDAP F PQSA  R  +  C                      V V GA+  ESAPE++ A QG   A      A  AATA        + CA CA+T+ERCSRLE+R+A+SER LSLLQ +     XXXXXXXXXXXXX                                        NWASK S+EKLA+ LRQL+AR KDGED LALVDHGL+GVREEMAPLS SV  LKRLVE+ LREK+QAAELLKGYVTTITREV
Sbjct:    1 MNEGLNGGD-PADDFDLFWGMPRSGGGDGGSSGSGINHESRGGGGLTDVTSGGAGLMSSP---TLSGSSSRA------GNLNTATPTLMGSLWSHSSMP-PEAYGHSLHVHASQAEGPAPTAAGLNADLHGGSPXXXXXXXXXXXXXXXXXXHQHSAGRGDGMHVSSRQRQQHL------------PATSPPRQPARPTAVTDARGRGRNGGETG---VSGSIVEYKLEELAAVITASVVGKLEVDVREALWAGNQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAVEATVAPLRSRLAALEEQMIRLSAASRSGSGSSGD---GGRDTPRGVRGNSSGSXXXXXXXXXGNAAAEPIAALTALAQRTGTLEGRHKQLQAKVALLDNSFGPKASDWAQTIKAFLQERVSEPAAGAAGRA-AVTVGTRG--------KGGKRGLGIDAPAFVPQSAAQRSTAAVCASXXXXXXXXXXXXXXXXXXXXVDVEGAKHEESAPEVVGAVQGDSTAADKPTAAKGAATATAAAAGKLQRCAGCAETQERCSRLEKRVAESERALSLLQSQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------NWASKTSVEKLAAALRQLAARTKDGEDALALVDHGLRGVREEMAPLSRSVLTLKRLVESQLREKDQAAELLKGYVTTITREV 669          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig76.16506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FX96_ECTSI9.330e-10350.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 496..523
NoneNo IPR availableCOILSCoilCoilcoord: 589..609

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig76contigL-elsbetiae_contig76:16042..18212 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig76.16506.1mRNA_L-elsbetiae_contig76.16506.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig76 16042..18212 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig76.16506.1 ID=prot_L-elsbetiae_contig76.16506.1|Name=mRNA_L-elsbetiae_contig76.16506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=669bp
MNHDIHGGDTPADDFDLWWGAGPTRNEEQHHTNHLGDMSSGIGSSTPAPS
AATHGGSSRGGSSRVGSGSLNPTTSTLMGSLWSSGGAPHLEAYGHRHHVH
GSQGEDGVHGSSSPPSASSRRAWLPPPGQHHQHSTISTDGAASPSNRIGQ
AVVGDVAAAAATAATAPSSSSSLSQPTAGMNSSRTGDSSISGNNVDHKLE
ELAAAITASVLGKLDTGVWEALATGQQQQQQQQQQESSSVSFTSAASEDG
RRQTEAAVVAAVAPLRSRLAALEEQTSRLMARSSAGNGDGGDTSRGGRAT
SGGVGGGVGLGHGGGGGSAAAAEPLLALNALAQRTGTLEGRHKQVQAKVA
LLDNAFGPKASDWAQTIKAFIQEREATAGGGGRAVAVAVRPTGGGGSCSG
SKGGRKPLAIDAPVFSPQSARDISRGCGKGNNAYGGAGAAAGSPVVVAGA
RRVESAPEILRAAQGGDAAVAGAAVASEAATAGVREGAVDKGCAACAQTR
ERCSRLEQRLAKSERTLSLLQGRTAAVAATAATAAAATAAADAVKAWEVE
EGSRRDAAVEKAVSSDVLGRQQKAMAAGGGGNWASKASLEKLASELRQLS
ARAKDGEDTLALVDHGLKGVREEMAPLSGSVSVLKRLVETHLREKEQAAE
LLKGYVTTITREVREFLY*
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