prot_L-elsbetiae_contig76.16505.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig76.16505.1
Unique Nameprot_L-elsbetiae_contig76.16505.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length338
Homology
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BLAST of mRNA_L-elsbetiae_contig76.16505.1 vs. uniprot
Match: D8LCH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH2_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 6.080e-81
Identity = 137/186 (73.66%), Postives = 156/186 (83.87%), Query Frame = 0 
Query:    1 MEHRALRLPRVEPLLHVPISVIVEFVSNRSEAEVLLRIGDLAHEFDHLTASLVQWLEHQQYLRIDS---QEHLPALGAGQSLASSLVPLTHQASAANRYGVRLLQQKISDTLAQLQRHMDAVEVFSNQNASFSQELQLCGLRERAEQRHRLAETESTLAGRLSKFLGGCDSFYDEQPLSLAMHFAA 183
            ME+RALRLPR EPLLHVP+S IVEFVSNRSEAEVLLRIGDL HEFDHLT +LVQWLEH+Q+L  D    +E  P   +G+SL  SLVPL HQA   NR+GVR+LQ+KI++ L QLQR+MDAV+VF+NQNASFSQEL+LCGL +RAEQR RLAETES L  RL+KFLGGCDSFYDEQPL LAM FAA
Sbjct:    1 MENRALRLPRAEPLLHVPVSAIVEFVSNRSEAEVLLRIGDLGHEFDHLTRTLVQWLEHEQHLTADGCLQEEQQPVEDSGESLVLSLVPLAHQARVVNRHGVRVLQEKITECLQQLQRYMDAVQVFANQNASFSQELRLCGLGDRAEQRRRLAETESALVRRLAKFLGGCDSFYDEQPLPLAMQFAA 186
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BLAST of mRNA_L-elsbetiae_contig76.16505.1 vs. uniprot
Match: A0A6H5JFN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFN0_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.220e-75
Identity = 139/200 (69.50%), Postives = 156/200 (78.00%), Query Frame = 0 
Query:    1 MEHRALRLPRVEPLLHVPISVIVEFVSNRSEAEVLLRIGDLAHEFDHLTASLVQWLEHQQYLRIDS---QEHLPALGAGQSLASSLVPLTHQASAANRYGVRLLQQKISDTLAQLQRHM--------------DAVEVFSNQNASFSQELQLCGLRERAEQRHRLAETESTLAGRLSKFLGGCDSFYDEQPLSLAMHFAA 183
            ME RALRLPR EPLLHVP+S IVEFVSNRSEAEVLLRIGDL HEFDHLT +LVQWLEH+Q+L  D    +E  PA   G+SL  SLVPL HQA   NR+GVR+LQQKI++ L QLQR+M              DAV+VF++QNASFSQEL+LCGL +RAEQR RLAETES LA RL+KFLGGCDSFYDEQPL LAM FAA
Sbjct:   21 MEDRALRLPRAEPLLHVPVSAIVEFVSNRSEAEVLLRIGDLGHEFDHLTRTLVQWLEHEQHLTADGCLQEEQQPAEDTGESLVLSLVPLAHQARVVNRHGVRVLQQKITECLQQLQRYMVGVVQGDGFGKWTMDAVQVFADQNASFSQELRLCGLGDRAEQRRRLAETESALARRLAKFLGGCDSFYDEQPLPLAMQFAA 220
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig76.16505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LCH2_ECTSI6.080e-8173.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFN0_9PHAE1.220e-7569.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig76contigL-elsbetiae_contig76:6648..10686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig76.16505.1mRNA_L-elsbetiae_contig76.16505.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig76 6648..10686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig76.16505.1 ID=prot_L-elsbetiae_contig76.16505.1|Name=mRNA_L-elsbetiae_contig76.16505.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp
MEHRALRLPRVEPLLHVPISVIVEFVSNRSEAEVLLRIGDLAHEFDHLTA
SLVQWLEHQQYLRIDSQEHLPALGAGQSLASSLVPLTHQASAANRYGVRL
LQQKISDTLAQLQRHMDAVEVFSNQNASFSQELQLCGLRERAEQRHRLAE
TESTLAGRLSKFLGGCDSFYDEQPLSLAMHFAAGAASGGSAAAAAAAATV
AAPAVAPAAQSPAQPAASARAPAVAPTAVPPTATPAAPVISHSVPAPQRR
QHICAKEAERAHLAADNTDNPKHPGSGCTNACTEGSADREAPLPPLPARG
KAGASSIHRDAGAEEASTLGGDRCRKRRRRQQQQQLSQ
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