mRNA_L-elsbetiae_contig7558.16455.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE) HSP 1 Score: 374 bits (960), Expect = 9.160e-115 Identity = 272/495 (54.95%), Postives = 309/495 (62.42%), Query Frame = 2 Query: 695 SDEEMSSTLRRLSLTVQKRRRLADSXXXXXXXXXXXXXXXXXXXXXXXXXX----VSAGLFDKETGEPIEIGGVLNRDGWIRLCGGQHNSAGGDGSGNAKSGVNGDFSANSHDRSNNXXXXXXXXXG--QHGPTVVRIGRASGAASGADAGTSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----VLELDVVVNPPAVTSLECGIGLPMAGFSIVAQAEAEFDTGLGWEWLREEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDQP---SGSRGFTRVVGTLRAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLD------------GRRSLEG---------RDGGG----GGVSGDGS--RNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNKAGRAQ 2056 SD +M+STLRRLSLTVQKRRRLAD XXXXXXXXXX ++A LF KETGEPIE+ GVLN DGW+RLCG ++ G +G GDF A + Q G V+RIG + A + XXXXXXXX LE+DVVVNPPAVTSLEC I PMAGFS+VAQAE EF TG+GWEWL EE XXXXXXXXXXXXXXXXX T +G+RGF+RVVG +RAYTPVD DVG RLM+RCTP+GA GRRGRPVVRVLT+PVR G PGPLALR RWL+ G R +EG R+GGG GG + G + RRLRVMCYNILADMYCTS+QAD+VLYP+CPKE+RAMDYRMQ+VAREVRGHAADL+MLQECEAKAF R+L+PGL FDG EGIY NKAG+AQ Sbjct: 45 SDSDMASTLRRLSLTVQKRRRLADKIKKGANGGKAKRSXXXXXXXXXXGVGNGEELTAALFGKETGEPIEVDGVLNGDGWVRLCGSGDSTHATPGE---TAGNTGDFVARAAALQGGEFGSGKGSTSSEQKGLVVIRIGPTTPATAXXXXXXXXXXXXXXXXXSPSAGAADAASAEDGGIKIPGAAAGEDAGFLEMDVVVNPPAVTSLECSIAQPMAGFSVVAQAEVEFGTGMGWEWLIEEXXXXXXXXXXXXXXXXXXXXADGLSRRGGRAGGDNGSRTKGGQLFTGARGFSRVVGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRAPGPLALRRRWLEEREGAVYGGGGEGSREIEGLADGTEGGVREGGGRVLPGGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADEVLYPYCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLAFDGFEGIYANKAGQAQ 536
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI) HSP 1 Score: 259 bits (663), Expect = 4.990e-73 Identity = 138/206 (66.99%), Postives = 152/206 (73.79%), Query Frame = 2 Query: 1523 GFTRVVGTLRAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLD------------GRRSLEG----------RDGGG----GGVSGDGS--RNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNKAGRAQ 2056 GFTRVVG +RAYTPVD DVG RLM+RCTP+G GRRGRPVVRVLT+PVR G PGPLALR WL+ G EG R+GGG GG + G R RLRVMCYNILADMYCTS+QADKVLYP+CPKE+RAMDYRMQ+VAREVRGHAADL+MLQECEAKAF RFL+PGL DG EGIY NKAG+AQ Sbjct: 158 GFTRVVGRMRAYTPVDADVGLRLMVRCTPMGLEGRRGRPVVRVLTSPVRPGRVPGPLALRRHWLEERGGGVYGGGGEGSTETEGLADDGTEGGVREGGGRALPGGAAAVGGTIRRRCRLRVMCYNILADMYCTSEQADKVLYPYCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRFLSPGLALDGFEGIYANKAGQAQ 363
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: UPI00103A2F3F (2',5'-phosphodiesterase 12 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103A2F3F) HSP 1 Score: 103 bits (257), Expect = 2.220e-19 Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = 2 Query: 1535 VVGTLRAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNK 2041 +VG YTP +DVG++L I C P G P V ++ V PG +R + L R R + YNILAD+YC SD +VLYP+CP ++DYR Q++ +E+ G+ AD++ LQE +AK F +L P L+ +GL G++ K Sbjct: 202 LVGESYTYTPTAQDVGKKLKIECIP--GNGETTGPTVEAISKNVVE-AGPGKCPFETRHMFTASKL----------------TNNRFRCVTYNILADLYCDSDHTREVLYPYCPPYALSIDYRKQLILKELTGYNADILCLQEVDAKIFNHYLQPLLQENGLHGVFYKK 351
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: A0A6A4WMM0_AMPAM (2',5'-phosphodiesterase 12 n=6 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WMM0_AMPAM) HSP 1 Score: 100 bits (249), Expect = 2.410e-18 Identity = 64/183 (34.97%), Postives = 93/183 (50.82%), Query Frame = 2 Query: 1502 DQPSGSRGFTRVVGTLRAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNKAGR 2050 + P+ G+ RVVG+ +Y P ED+G RL + C P+ RRG V V V+ G P P R + R++ +D RV+ YNILAD+Y SD VL+P+CP +DYR Q++ +E+ G+ D+V LQE + K + L P E GLEG++ K G+ Sbjct: 223 EDPAADGGW-RVVGSSHSYMPSAEDIGHRLRLVCVPVNGE-RRGETVTVVSEQDVQAGPGPCPFDQRHAFT---RTVTCQDS---------------YRVVSYNILADLYADSDFTRTVLHPYCPPYALNIDYRKQLIVKELMGYNGDIVCLQEVDKKVYEGDLEPMFETAGLEGVFTPKGGQ 385
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: UPI001E272425 (2',5'-phosphodiesterase 12 n=1 Tax=Melitaea cinxia TaxID=113334 RepID=UPI001E272425) HSP 1 Score: 99.8 bits (247), Expect = 3.700e-18 Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 1556 YTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNKA 2044 YTP ED+G +L + C P+ G V V + V G PGP SR L+ + R + YNILAD+YC S+ A VL+P+CP +DYR Q++ +E++G+ AD++ LQE ++K F L LE DGLEG++ KA Sbjct: 207 YTPTKEDIGLKLKLECIPVNTNSI-GPAVEFVTKSTVEAG--PGPCPFESRHAFTANKLK----------------DKSFRCVSYNILADLYCDSEFAHTVLHPYCPPYALHIDYRKQLILKELKGYNADIICLQEVDSKVFNGSLKTFLECDGLEGLFYKKA 350
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: A0A212ETZ2_DANPL (Putative 2-phosphodiesterase n=1 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A212ETZ2_DANPL) HSP 1 Score: 97.4 bits (241), Expect = 5.840e-18 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 1553 AYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNK 2041 +YTP ED+G +L + C P+ A+ PVV ++ + PG +R + L G +R R + YNILAD+YC SD VL+P+CP +DYR Q++ +E++G+ AD++ LQE + K F + L P L+ D G++ K Sbjct: 53 SYTPKSEDIGLKLKLECIPVNAK--LSGPVVECISKNLVE-AGPGSCPFETRHMFTPTKLNG----------------KRFRCVSYNILADLYCDSDYTRTVLHPYCPPYALQIDYRKQLIMKELKGYNADIICLQEVDGKIFNKCLKPFLDSDNFNGLFYKK 196
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: UPI001C8A80B8 (2',5'-phosphodiesterase 12 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8A80B8) HSP 1 Score: 98.6 bits (244), Expect = 8.740e-18 Identity = 61/174 (35.06%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 1511 SGSRGFTRVVGTLRAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIY 2032 SG + G R +TP + D+G R+M+ CTP G R G P V + PV G PG +R + ++ +G LRV+ YNILAD+Y +D + VLYP+C MDYR ++ +E+ G+ AD+V LQE + AF L+P L+ GL+G++ Sbjct: 202 SGDGDCWKEAGRGRVFTPSNLDIGLRVMLDCTP-GNGSRLGEPKKLVSSGPVEAG--PGTCTFDNRHMYTQKVTDGSS----------------LRVVSYNILADIYAQTDLSKTVLYPYCAPYALEMDYRQNLIKKELSGYNADIVCLQEVDKVAFADSLSPALDAFGLDGVF 356
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: A0A8B8HSB6_9NEOP (2',5'-phosphodiesterase 12 n=3 Tax=Vanessa TaxID=42274 RepID=A0A8B8HSB6_9NEOP) HSP 1 Score: 98.2 bits (243), Expect = 1.130e-17 Identity = 58/162 (35.80%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 1556 YTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIYLNK 2041 YTP EDVG +L + CTP+ + G V V V G PGP +R + L+ + R + YNILAD+YC SD + VL+P+CP +DYR Q++ +E++G+ AD++ LQE + K F L P L +GLEG++ K Sbjct: 203 YTPTKEDVGMKLKLACTPVN-KNNIGPIVESVTKNTVEAG--PGPCPFENRHVFTVNKLK----------------EKSFRCVSYNILADLYCDSDFSRTVLHPYCPPYALHIDYRKQLIIKELKGYNADIICLQEVDLKVFNSSLKPFLGCEGLEGLFYKK 345
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: A0A8C6ZLJ4_NOTPE (Phosphodiesterase 12 n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6ZLJ4_NOTPE) HSP 1 Score: 97.1 bits (240), Expect = 1.150e-17 Identity = 68/178 (38.20%), Postives = 90/178 (50.56%), Query Frame = 2 Query: 1502 DQPSGSRGFTRVVGTL-RAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIY 2032 +Q SG G+ R +TP + VG RL +RCTP A R G P + PV E GP A D R GR G G RLR + YNILAD Y ++ + VLYP+C +DYR ++ +E+ G++ADLV LQE + AF LAP L+ GLEG++ Sbjct: 180 EQRSGGGGWVEEEAAAGRVFTPDNALVGLRLKLRCTPGDAAQRYGLPCEVESSGPV----EAGPGACT---FDARHLYTGRACGAG-----------RLRAVTYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLLKKELAGYSADLVCLQEVDKGAFADSLAPALDAFGLEGLF 339
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Match: A0A8C3D3F8_CAIMO (Phosphodiesterase 12 n=1 Tax=Cairina moschata domestica TaxID=1240228 RepID=A0A8C3D3F8_CAIMO) HSP 1 Score: 97.1 bits (240), Expect = 1.250e-17 Identity = 63/164 (38.41%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 1541 GTLRAYTPVDEDVGRRLMIRCTPLGARGRRGRPVVRVLTTPVRRGCEPGPLALRSRWLDGRRSLEGRDGGGGGVSGDGSRNTRRLRVMCYNILADMYCTSDQADKVLYPHCPKEFRAMDYRMQVVAREVRGHAADLVMLQECEAKAFGRFLAPGLEFDGLEGIY 2032 GT R +TP + VG RL +RCTP R G+P + PV G PG SR L R+ V G GS +R + YNILAD Y ++ + VLYP+C +DYR ++ +E+ G++ADL+ LQE + F LAP L+ GLEGI+ Sbjct: 204 GTERVFTPCNALVGLRLKLRCTPGDGEQRYGQPCEVESSGPVEAG--PGACTFDSRHLYTRK-----------VCGHGS-----VRAVSYNILADTYAQTEFSRTVLYPYCAPYALEIDYRQNLLKKELAGYSADLICLQEVDKSVFVDSLAPALDAFGLEGIF 349 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7558.16455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7558.16455.1 >prot_L-elsbetiae_contig7558.16455.1 ID=prot_L-elsbetiae_contig7558.16455.1|Name=mRNA_L-elsbetiae_contig7558.16455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=450bp MSSTLRRLSLTVQKRRRLADSKAGAASGGKARGGKKRAKNENGGGGGVSAback to top mRNA from alignment at L-elsbetiae_contig7558:462..8586- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7558.16455.1 ID=mRNA_L-elsbetiae_contig7558.16455.1|Name=mRNA_L-elsbetiae_contig7558.16455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8125bp|location=Sequence derived from alignment at L-elsbetiae_contig7558:462..8586- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7558:462..8586- >mRNA_L-elsbetiae_contig7558.16455.1 ID=mRNA_L-elsbetiae_contig7558.16455.1|Name=mRNA_L-elsbetiae_contig7558.16455.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2700bp|location=Sequence derived from alignment at L-elsbetiae_contig7558:462..8586- (Laminarionema elsbetiae ELsaHSoW15)back to top |