prot_L-elsbetiae_contig7557.16454.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7557.16454.1
Unique Nameprot_L-elsbetiae_contig7557.16454.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: D7FNA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA0_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.040e-73
Identity = 111/192 (57.81%), Postives = 133/192 (69.27%), Query Frame = 0
Query:   29 FQPIRRGSKGRTYPAKRRWTAAESEMMQKWVDNGWLVVLEGLDDLYWMYATVARDDVNTVVVTNDLMRDHSDFFPGAREFVRWKRSHHVAFSYVYADGDENGPLDWVAGKQPERPQTPPAIKLRPGASWEEVQRTGANWHLPVRISRNAQEQXXXXXXXXXXXXXXXXXXXXXXXAAAKSFLCVPMPTSMPR 220
              P RRG K R +  KR WT  E+E++QKWV+N WL ++EGLDDLYWMYATVARDDVNT+V+TNDLMRDH +FFPG REFVRWKRSH V+FS+++  G   GP  W+ GKQPE   TPPAI L PGASW+EVQRTG+NWHLPVR+ RN+++                           KS LC+PMPTSM R
Sbjct:    1 MSPSRRGRKARKFSPKRSWTPIETEIVQKWVENQWLAMVEGLDDLYWMYATVARDDVNTLVLTNDLMRDHRNFFPGTREFVRWKRSHLVSFSFLWEKG---GPQAWMQGKQPEESPTPPAINLSPGASWKEVQRTGSNWHLPVRVRRNSKKHNCDNNSDRDDGSRDHAEPI-------KSCLCIPMPTSMTR 182          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: A0A6H5JWK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK5_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 7.350e-72
Identity = 109/190 (57.37%), Postives = 134/190 (70.53%), Query Frame = 0
Query:   31 PIRRGSKGRTYPAKRRWTAAESEMMQKWVDNGWLVVLEGLDDLYWMYATVARDDVNTVVVTNDLMRDHSDFFPGAREFVRWKRSHHVAFSYVYADGDENGPLDWVAGKQPERPQTPPAIKLRPGASWEEVQRTGANWHLPVRISRNAQEQXXXXXXXXXXXXXXXXXXXXXXXAAAKSFLCVPMPTSMPR 220
            P RRG K R +  KR WT  E+E++QKWV+N WL+++EGLDDLYWMYATVARDDVNT+VVTNDLMRDH +FFPG REFVRWKRSH V+FS+ +   +++GP  WV G QP+  +TPPAI L PGASW+EVQR G+NWHLPVR+ RN+++                           KS LC+PMPTSM R
Sbjct:    3 PSRRGEKARKFSPKRSWTPMETEIVQKWVNNQWLMMVEGLDDLYWMYATVARDDVNTLVVTNDLMRDHRNFFPGTREFVRWKRSHLVSFSFRW---EKDGPHAWVEGMQPKESRTPPAINLSPGASWKEVQRAGSNWHLPVRVRRNSKKHNYDKNSNGDDGMPNHAEPI-------KSCLCIPMPTSMTR 182          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: D8LN58_ECTSI (Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN58_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 4.630e-10
Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = 0
Query:    1 VDWLAEHLASKGERVLITMPWWYCKDDGF----QPIRRGSKGRTYPAKR----RWTAAESEMMQKWVDNGWLVVLEGLDDLYWMYATVARDDVNTVVVTNDLMRDHSDFFPGAREFVRWKRSHHVAFSYVYADGDENGPLDWVAGK--QPER-PQTPPAIKLRPGASW-EEVQRTGAN-WHLPV 171
            VD + + L +KGER L+ +   Y    G      P R G +  + P  +    RW A     + +  D       E  DD YWMYATVA DD+   V++ND  RDH         ++RW+ +    F   Y       PL  + GK   P+  P  PP + ++P  ++  +VQ++    WH+P 
Sbjct:  615 VDLMVQALEAKGERPLVLIAEKYIDRVGDLYDNSPARGGFRYMSNPLNKAIVKRWRA--KSQLYECSD-------EASDDWYWMYATVAFDDIPMTVISNDRTRDHRMSLAETVPYLRWRTTQLAQFELTY-------PLKDIMGKGLNPQGWPANPPQVAIQPPPAFTRDVQKSEQGCWHVPA 782          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: D7FNA1_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA1_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.070e-8
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    1 VDWLAEHLASKGERVLITMPWWYCKDDGFQPIR 33
            VDWLAEHL SKGERVLITMPW+YCKDD F P+R
Sbjct:  557 VDWLAEHLKSKGERVLITMPWYYCKDDNF-PMR 588          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: A0A6H5JYJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.590e-7
Identity = 27/37 (72.97%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 VDWLAEHLASKGERVLITMPWWYCKDDGFQPIRRGSK 37
            VDWLAEHL SKGERVLITMPW+YCK D   P+R G +
Sbjct:  232 VDWLAEHLNSKGERVLITMPWYYCKADNI-PMRAGRR 267          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: F0YE99_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YE99_AURAN)

HSP 1 Score: 61.2 bits (147), Expect = 2.540e-7
Identity = 47/138 (34.06%), Postives = 64/138 (46.38%), Query Frame = 0
Query:    4 LAEHLASKGERVLITMPWWYCKDDGFQPIRRGSKGRTYPAKR---------RWTAAESEMMQKWVDNGWL-VVLEGL-DDLYWMYATVARDDVNTVVVTNDLMRDHSDFFPGAREFVRWKRSHHVAFSYVYADGDENG 130
            +A HL + G  VL+ +P  YC+      +   SK R   A R             +E   ++ W + G L VV  G  DDLYWM ATV+RD    + V+ND  RDH     G  ++ RW     V F   YA+ D+ G
Sbjct:  738 VAGHLEAAGHVVLVVLPAKYCE----AVVPNHSKRRPRAAARDEPGGTPLQELEDSELAAIKAWAERGALYVVPRGCHDDLYWMLATVSRDQ--PLAVSNDKTRDHWPKLIGEAQYRRWATRSVVNFGLGYAEPDDAG 869          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: A0A4D9DFA8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFA8_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.030e-5
Identity = 29/70 (41.43%), Postives = 39/70 (55.71%), Query Frame = 0
Query:   54 MMQKWVDNG--WLVVLEGLDDLYWMYATVARDDVNT---------VVVTNDLMRDHSDFFPGAREFVRWK 112
            M+Q+W + G  + +    LDDLYWMYATVA  D  +         + ++ND MRDH      AR F+RWK
Sbjct:    1 MLQRWTEEGIVYRIPRGQLDDLYWMYATVAARDPPSSPPPSFPPMIAISNDCMRDHWLDLLEARPFLRWK 70          
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Match: A0A835ZAC6_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.580e-5
Identity = 43/145 (29.66%), Postives = 66/145 (45.52%), Query Frame = 0
Query:    1 VDWLAEHLASKGERVLITMPWWYCKDDGFQPIRRGSKGRTYPAKRRWTAAES-EMMQKWVDNG---------------WLVVLEGL------DDLYWMYATVARDDVNT--VVVTNDLMRDHSDFFPGAREFVRWKRSHHVAFSY 121
            VD + + L ++GERVL+  P  Y +      I   ++      KR   + ++  +++ W + G               ++  L G       DD YWMY TVA D+V     VV+NDLMRDH         FVRWKR+  + + +
Sbjct:  346 VDAVVQKLEARGERVLVVCPERYLR----AIIPNSTRFARLQRKRTVLSPQALAIIRSWEEKGILYRQVRYQLVLCCSYVPTLAGRCANTDNDDWYWMYLTVAFDNVAAPVTVVSNDLMRDHRLALLEPTPFVRWKRTQQMRYYF 486          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7557.16454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FNA0_ECTSI1.040e-7357.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWK5_9PHAE7.350e-7257.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN58_ECTSI4.630e-1029.89Ribonuclease P n=1 Tax=Ectocarpus siliculosus TaxI... [more]
D7FNA1_ECTSI2.070e-884.85PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JYJ8_9PHAE1.590e-772.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YE99_AURAN2.540e-734.06Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A4D9DFA8_9STRA3.030e-541.43Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835ZAC6_9STRA3.580e-529.66Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 1..126
e-value: 1.4E-20
score: 75.5
NoneNo IPR availablePANTHERPTHR13547UNCHARACTERIZEDcoord: 42..174
IPR031595Protein-only RNase P, C-terminalPFAMPF16953PRORPcoord: 47..123
e-value: 5.0E-11
score: 42.6
IPR033495Mitochondrial ribonuclease P catalytic subunitPANTHERPTHR13547:SF1MITOCHONDRIAL RIBONUCLEASE P CATALYTIC SUBUNITcoord: 42..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7557contigL-elsbetiae_contig7557:1812..7855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7557.16454.1mRNA_L-elsbetiae_contig7557.16454.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7557 1812..7855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7557.16454.1 ID=prot_L-elsbetiae_contig7557.16454.1|Name=mRNA_L-elsbetiae_contig7557.16454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
VDWLAEHLASKGERVLITMPWWYCKDDGFQPIRRGSKGRTYPAKRRWTAA
ESEMMQKWVDNGWLVVLEGLDDLYWMYATVARDDVNTVVVTNDLMRDHSD
FFPGAREFVRWKRSHHVAFSYVYADGDENGPLDWVAGKQPERPQTPPAIK
LRPGASWEEVQRTGANWHLPVRISRNAQEQDDDDNDGSSSHNRGRDSGDA
AASAAAKSFLCVPMPTSMPR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031595PRORP_C
IPR033495MRPP3