prot_L-elsbetiae_contig7528.16421.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7528.16421.1
Unique Name	prot_L-elsbetiae_contig7528.16421.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	158

Homology

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BLAST of mRNA_L-elsbetiae_contig7528.16421.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.410e-56
Identity = 125/166 (75.30%), Postives = 131/166 (78.92%), Query Frame = 0

Query:    1 AARVVQAGSGAPAAPRRIFHAWTTGLRSPSLPVKQQVCAELSRLLDEAVQDVDRAQR-----ESAPAQVAAVGADGAGDEKGAEP---AAVLRRAAAVRRLRQCVELLPLERLRSVAERRMLKEGEDEPMLSRALQSIVDLVASAELASRVLREHQAAAAVAAAVD 158
            AARVVQAGSGAP  PRRIF AW T LRSPSLPVKQQVCAELSRLLDEAVQ VDRA R      SAPA V AV A G G E  A     A  L+RAA ++RLRQCVE+LPLERLRS+AERRMLKEGEDEPMLSRALQSIVDLV+SAELA RVLREH   AA AAA D
Sbjct: 4898 AARVVQAGSGAPTVPRRIFRAWATALRSPSLPVKQQVCAELSRLLDEAVQAVDRAHRAEAGPSSAPAAVRAVTAAGGGGESSAVSSGEAVRLQRAAVLKRLRQCVEILPLERLRSLAERRMLKEGEDEPMLSRALQSIVDLVSSAELALRVLREHDQVAAAAAATD 5063

[Close]

BLAST of mRNA_L-elsbetiae_contig7528.16421.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 5.310e-52
Identity = 118/160 (73.75%), Postives = 123/160 (76.88%), Query Frame = 0

Query:    1 AARVVQAGSGAPAAPRRIFHAWTTGLRSPSLPVKQQVCAELSRLLDEAVQDVDRAQR-----ESAPAQVAAVGADGAGDEKGA---EPAAVLRRAAAVRRLRQCVELLPLERLRSVAERRMLKEGEDEPMLSRALQSIVDLVASAELASRVLREHQAAAA 152
            AARVVQAGSG P   RRIF AW T LRSPSLPVKQQVCAELSRLLDEAVQ VDRA R      SAPA V AV A G   E  A     A  L+RAA + RLRQCVE+LPLERLRS+AERRMLKEGEDEPMLSRALQSIVDLV+SAELA RVLREH  A A
Sbjct: 5461 AARVVQAGSGTPTVLRRIFRAWATALRSPSLPVKQQVCAELSRLLDEAVQAVDRAHRAELGPSSAPAAVRAVTAAGGSGESSAFSSGEAVRLQRAAVLNRLRQCVEILPLERLRSLAERRMLKEGEDEPMLSRALQSIVDLVSSAELALRVLREHDQATA 5620

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7528.16421.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7528.16421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LCZ5_ECTSI	1.410e-56	75.30	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KT07_9PHAE	5.310e-52	73.75	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7528	contig	L-elsbetiae_contig7528:6434..6907 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7528.16421.1	mRNA_L-elsbetiae_contig7528.16421.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7528 6434..6907 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7528.16421.1 ID=prot_L-elsbetiae_contig7528.16421.1|Name=mRNA_L-elsbetiae_contig7528.16421.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
AARVVQAGSGAPAAPRRIFHAWTTGLRSPSLPVKQQVCAELSRLLDEAVQ
DVDRAQRESAPAQVAAVGADGAGDEKGAEPAAVLRRAAAVRRLRQCVELL
PLERLRSVAERRMLKEGEDEPMLSRALQSIVDLVASAELASRVLREHQAA
AAVAAAVD