prot_L-elsbetiae_contig7504.16402.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7504.16402.1
Unique Nameprot_L-elsbetiae_contig7504.16402.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length322
Homology
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: D7G8Q3_ECTSI (Mitochondrial ribosomal protein L46 isoform 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q3_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 1.180e-170
Identity = 242/305 (79.34%), Postives = 267/305 (87.54%), Query Frame = 0
Query:   18 RCTMRSFSFARRTRLQPTSMIGRFCCRELSATSQLPSKQQMDGFTVKDTRTPRPRVAKEKRKQYLAQRKASFEAEQNKAASLGLDWGIRSALLLERLPVIVEEYADWQRDFWDLQAQQAHYGMKFPAEMGFEYSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPGAAWRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQV-QSGSFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYLGDAMGVYLKHVI 321
            RCTM S S  RR +L+P +++    CRELS+ S L  KQQ++GFT+KD R PRPRVAK+KRKQYLA+RK +FEAEQ KA SLGLDWGIRSAL+LERLPVIVEEY DWQRDFWDLQ +QAHYG KFPAEMGF+Y DEK LTMEQ+LE+SPV LAPRRTPADESNDRTTLDRALDERLVLIVKP+ G  WRLPESAWE GETIRQ AERTAQQ+LLK+AT KGQRDDVAQLHFVGNCPAGWFWRT DEEQ  Q   FGDKVFINRVQLICGQPT+VK +AAEHLWVTKHEIGEYLG++MGVYLKH+I
Sbjct:    5 RCTMLSSSAVRRVKLRPLAVLLAPNCRELSS-SNLTKKQQIEGFTIKDRRPPRPRVAKQKRKQYLAERKDAFEAEQEKATSLGLDWGIRSALILERLPVIVEEYTDWQRDFWDLQTKQAHYGAKFPAEMGFKYDDEKSLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLVLIVKPRSGDEWRLPESAWEPGETIRQTAERTAQQLLLKSATRKGQRDDVAQLHFVGNCPAGWFWRTADEEQGGQHEKFGDKVFINRVQLICGQPTVVKRQAAEHLWVTKHEIGEYLGESMGVYLKHLI 308          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: W7TRZ1_9STRA (Mitochondrial ribosomal protein l46 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRZ1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 3.050e-28
Identity = 82/246 (33.33%), Postives = 123/246 (50.00%), Query Frame = 0
Query:   81 YLAQRKASFEAEQNKAASLGLDWGIRSALLLERLPVIVEEYADWQRDFWDLQAQQAHYGMKFPAEMGFE-YSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVK-PKPGAAWRLPESAWEAGE--------TIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQV-QSG---SFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYLGDA 312
            YL  R A     +  A    L W I +A ++ER P+I++E  DW+  + ++Q + A +G  FP E+     + E   + +++L   P  LAPR T AD  NDRTTL+RAL ERL L+++ P     W LP +  E G         ++R+  E T ++ L           D  + +   N P G  WR   E    ++G   ++GDKVF  R Q + G+  +V     E +WVT+ E+GEYL  A
Sbjct:  102 YLQSRAAQLSRHEAAAKEANLPWRIVAASIVERHPIIMKEPEDWEAAYMEMQEEIAKHGKVFPPELNLMGQAAELDRSDDEVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRKTHEATVRRFL----------GDKFEAYVPSNAPVGMHWRVPSEPSTGKTGGEQTYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEYLPQA 337          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: A0A2P6VD62_9CHLO (Serine threonine-kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VD62_9CHLO)

HSP 1 Score: 106 bits (264), Expect = 1.310e-21
Identity = 78/204 (38.24%), Postives = 110/204 (53.92%), Query Frame = 0
Query:  108 ALLLERLPVIVEEYADWQRDFWDLQAQQAHYGMKFPAEMGFEYSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPGAAWRLPESAWEAGETIRQAAERT-AQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEA-AEHLWVTKHEIGEYL 309
            A++ ERLPV+V E  +W+R++++ Q   A    K+  E+  E++D K   M++    S    APR T AD +NDR +L R LD+RL ++V+ K G  W LP+     GET+RQ AER  A  V L          +  + +FVGN PAG             G  G  +F +R QLI G P +      +EH+WVTK E+GEYL
Sbjct:   52 AVVFERLPVVVPEDPEWEREYFEWQDGLAG---KYRKELPREFTDLKDSEMKEDAGAS-YEPAPRVTAADHANDRRSLKRRLDQRLFMLVRQKGG--WTLPQQENAEGETMRQTAERALADAVEL----------EAVRPYFVGNAPAG---------HAPLGDAGT-LFFHRCQLIQGVPALRGGSGYSEHVWVTKEELGEYL 229          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: A0A2P6TJ63_CHLSO (Glycosyl group 1 family n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TJ63_CHLSO)

HSP 1 Score: 103 bits (256), Expect = 1.190e-20
Identity = 78/216 (36.11%), Postives = 115/216 (53.24%), Query Frame = 0
Query:   96 AASLGLDWGIRSALLLERLPVIVEEYADWQRDFWDLQAQ-QAHYGMKFPAEMGFEYSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPGAAWRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEA-AEHLWVTKHEIGEYL 309
            AA+ G  +G   A +LERLPV+V E   W+++F++ QA  +A Y  + P E    ++D K   ++   + S    A R T AD +NDR +L R LD+RL ++VKPK G +W L +     GET+RQ AER     +  +A          Q +FVGN PAG         Q+  G+     F +R QLI G P +      +E++WV K E+G+Y+
Sbjct:   47 AAAAGKLYG---ACVLERLPVVVPESPAWEQEFFEWQASVRAKYMKQLPPE----FTDVKESEVQG--DASSYEPASRETEADRTNDRRSLQRRLDQRLFMLVKPK-GGSWALMQRENVEGETMRQTAERALADAVDTSAV---------QPYFVGNAPAG-------HVQLSDGT----TFFHRCQLIQGVPALQGGSGYSEYVWVAKDELGDYI 232          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: A0A4D9D2E5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2E5_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.000e-20
Identity = 67/209 (32.06%), Postives = 104/209 (49.76%), Query Frame = 0
Query:  118 VEEYADWQRDFWDLQAQQAHYGMKFPAEMGFE-YSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVK-PKPGAAWRLPESAWEAGE--------TIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQV-QSG---SFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYLGDA 312
            ++E  DW+  + ++Q + A +G  FP E+    ++ E   + + +L   P  LAPR T AD  NDRTTL+RAL ERL L+++ P     W LP +  E G         ++R   E T ++ +           +  + +   N P G  WR   E    ++G   ++GDKVF  R Q + G+  +V     E +WVT+ E+GEYL  A
Sbjct:    1 MKEPEDWEAAYMEMQEEIAKHGKVFPPELNLMGHAAELDRSDDDVLPELPFKLAPRVTKADRLNDRTTLNRALAERLFLLIRGPVTRGRWDLPMAVLEGGGKGGDMKGLSMRNTHEATVRRFM----------GEKFEAYVPSNAPVGVHWRVPSEPSTGKTGGEQAYGDKVFFYRAQHLKGRGKVVGEGVEEFVWVTREEMGEYLPQA 199          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: V4A4N9_LOTGI (MRP-L46 domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A4N9_LOTGI)

HSP 1 Score: 97.8 bits (242), Expect = 2.320e-20
Identity = 70/238 (29.41%), Postives = 112/238 (47.06%), Query Frame = 0
Query:  103 WGIRSALLLERLPVIVEEYADWQRDFWDLQAQQ-------AHYGMKF----------------------PAEMGFEYSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPGAA--WRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYL 309
            W +  A+ LER P+I +E  D+++   D  ++        + + ++F                      P EM  E  D+    +E+       + APRRT ADE +DR + +R LDE+L+LIVK + G    W LP S W  GE++RQ A R              Q  D  +  F+GN P G F++    ++V + S G KVF  +     G   + + + +++LWVTK E+ +Y+
Sbjct:    1 WDLFGAVCLERRPIITKEMTDYEKKMSDFLSKLELENSLLSDHELRFRDDKLHAKRIKLEELTVEELENPREMAVEAEDKWKTELEEF------TFAPRRTVADEKDDRKSTERKLDEKLILIVKQRLGKTDVWALPHSQWLDGESMRQTANRALD----------SQCGDQIKSCFIGNAPCG-FFKYKYPKKVVNESIGRKVFFFKALYENGPVKLKEGDVSDYLWVTKSELSDYM 221          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: E1ZJP2_CHLVA (MRP-L46 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJP2_CHLVA)

HSP 1 Score: 97.8 bits (242), Expect = 3.420e-20
Identity = 76/218 (34.86%), Postives = 110/218 (50.46%), Query Frame = 0
Query:   96 AASLGLDWGIRSALLLERLPVIVEEYADWQRDFWDLQAQQAHYGMKFPAEMGFEYSDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPGA---AWRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEA-AEHLWVTKHEIGEYL 309
            AAS G  +G+    +LERLPVI+ +  +W+++  + Q        K   +   E  D +    +      P   APR T AD++NDR +L R LD+RL ++V+PK G+   AW L +   + GET+RQ AER   + +          + V Q +FVGN PAG          V  G  G  +F +R QLI G P +      +EHLWV K E+ EY+
Sbjct:   50 AASGGKLFGV---CVLERLPVIIPDPPEWEQEHREWQQAITEKYFKVLPKDFVELKDSERQADDAGARYEP---APRITAADKANDRRSLQRRLDQRLFMLVRPKGGSGGGAWSLMQRENQEGETMRQTAERALAECV---------DESVVQPYFVGNAPAG---------HVALGEAGT-LFFHRCQLIQGVPVLRGGSGYSEHLWVAKDELPEYI 242          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: UPI001ABDC5A1 (39S ribosomal protein L46, mitochondrial isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001ABDC5A1)

HSP 1 Score: 94.0 bits (232), Expect = 1.320e-18
Identity = 75/241 (31.12%), Postives = 115/241 (47.72%), Query Frame = 0
Query:   98 SLGLDWGIRSALLLERLPVIVEEYADWQRDFWDLQAQ----QAHYG------MKFPAEMGFEYSD--------EKPLTMEQILERS------PVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPGAA--WRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYLGDA 312
            S G  W +  A+ L+R  V+ +  A  Q++  +L  Q    ++ Y       MK    +  + SD        E+ + M Q LE +       + LAPR T ADE NDRT+L+R L+  LVL+VK K G    W  P+  W AGET+RQ AER    +           D+  + HF+GN P G++     +        G KVF  +  L+ G+ ++   +  +++WV K E+ +YL  A
Sbjct:   36 SSGSPWRLHGAVCLKRPAVVSQSKAAIQQEVDELLQQIDLEKSFYSDHELQLMKDAERLRRKQSDLYDSDEEEEQDIVMAQDLEDTWEQKWKQMKLAPRVTEADEKNDRTSLNRKLENNLVLLVKEKIGNEDIWMFPQIEWVAGETMRQTAERALSDL----------SDNRVEAHFLGNAPCGFYKYKFPKTMRNEDIVGAKVFFFKA-LLKGKSSLTNQKKRDYVWVCKDELKDYLKPA 265          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: A0A6J0SLY8_9SAUR (39S ribosomal protein L46, mitochondrial n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SLY8_9SAUR)

HSP 1 Score: 92.8 bits (229), Expect = 3.460e-18
Identity = 76/246 (30.89%), Postives = 117/246 (47.56%), Query Frame = 0
Query:   96 AASLGLDWGIRSALLLERLPVIVE----EYADWQRDFWDLQAQQAHYG------------MKFPAEMGFEYSDEK-PLTMEQILERS----------PVSLAPRRTPADESNDRTTLDRALDERLVLIVKPKPG--AAWRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYLGDA 312
            AAS    W +   L L+R P + +    E  +    F  L+ +++ Y             ++  AE G++  +E+  L  E +L R             S APR T AD++NDRT+L+R LD+ L+L+VK   G    W LP++ WEAGET+R+ AER         AT  G   +  Q  F+GN P G++     +     G  G KVF  +   + G    +  E  +++WV+K E+ +YL  A
Sbjct:   31 AASASSRWKLFGGLCLQRPPTVSQAPSPEEVEMAELFQQLEVEKSIYSTHEMTRLAENERLRRIAEKGYDEEEERGDLGKEVVLIRDLEDMWEQNFQQFSPAPRITDADKNNDRTSLNRKLDQNLLLLVKHNFGDQTVWLLPQTEWEAGETLRETAERGL-------ATLSG---NPLQAKFLGNAPCGFYKYKFPKALRAEGFLGGKVFFFKA-FLQGSHWPLAREKVDYVWVSKEELADYLTPA 265          
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Match: UPI0006D92279 (39S ribosomal protein L46, mitochondrial n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D92279)

HSP 1 Score: 90.5 bits (223), Expect = 3.910e-18
Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = 0
Query:  170 APRRTPADESNDRTTLDRALDERLVLIVKPKPG--AAWRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVGNCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEAAEHLWVTKHEIGEYLGDAMGVYLKHV 320
            A R T AD+ +DRT+L+R L ERLVL+VK K G    W LP+  W +GET+RQ AER      L TA+     D+  +  F GN P G +     ++     S G KV   + +L+ G  T  K++  +HLWV+K E+ EYL      YLK V
Sbjct:   41 AERITEADKKDDRTSLNRKLRERLVLLVKEKLGDEEVWLLPQVEWRSGETMRQTAERA-----LATAS-----DNGVEAVFFGNVPCGVYKYKYPKDMRTDSSQGAKVVFFKARLLAGDLTKSKAKG-QHLWVSKSELKEYLKPE---YLKQV 179          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7504.16402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q3_ECTSI1.180e-17079.34Mitochondrial ribosomal protein L46 isoform 2 n=2 ... [more]
W7TRZ1_9STRA3.050e-2833.33Mitochondrial ribosomal protein l46 n=2 Tax=Nannoc... [more]
A0A2P6VD62_9CHLO1.310e-2138.24Serine threonine-kinase n=1 Tax=Micractinium condu... [more]
A0A2P6TJ63_CHLSO1.190e-2036.11Glycosyl group 1 family n=1 Tax=Chlorella sorokini... [more]
A0A4D9D2E5_9STRA2.000e-2032.06Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
V4A4N9_LOTGI2.320e-2029.41MRP-L46 domain-containing protein (Fragment) n=1 T... [more]
E1ZJP2_CHLVA3.420e-2034.86MRP-L46 domain-containing protein n=1 Tax=Chlorell... [more]
UPI001ABDC5A11.320e-1831.1239S ribosomal protein L46, mitochondrial isoform X... [more]
A0A6J0SLY8_9SAUR3.460e-1830.8939S ribosomal protein L46, mitochondrial n=1 Tax=P... [more]
UPI0006D922793.910e-1840.5239S ribosomal protein L46, mitochondrial n=1 Tax=L... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10coord: 181..321
e-value: 2.6E-28
score: 100.4
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 78..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7504contigL-elsbetiae_contig7504:2602..8051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7504.16402.1mRNA_L-elsbetiae_contig7504.16402.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7504 1737..8146 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7504.16402.1 ID=prot_L-elsbetiae_contig7504.16402.1|Name=mRNA_L-elsbetiae_contig7504.16402.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp
MKDCTDHMACGTFTMLGRCTMRSFSFARRTRLQPTSMIGRFCCRELSATS
QLPSKQQMDGFTVKDTRTPRPRVAKEKRKQYLAQRKASFEAEQNKAASLG
LDWGIRSALLLERLPVIVEEYADWQRDFWDLQAQQAHYGMKFPAEMGFEY
SDEKPLTMEQILERSPVSLAPRRTPADESNDRTTLDRALDERLVLIVKPK
PGAAWRLPESAWEAGETIRQAAERTAQQVLLKTATWKGQRDDVAQLHFVG
NCPAGWFWRTGDEEQVQSGSFGDKVFINRVQLICGQPTIVKSEAAEHLWV
TKHEIGEYLGDAMGVYLKHVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040008MRPL46