prot_L-elsbetiae_contig7460.16347.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7460.16347.1
Unique Nameprot_L-elsbetiae_contig7460.16347.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length271
Homology
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BLAST of mRNA_L-elsbetiae_contig7460.16347.1 vs. uniprot
Match: D8LIE4_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE4_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 6.550e-74
Identity = 172/275 (62.55%), Postives = 185/275 (67.27%), Query Frame = 0 
Query:    1 MSMSTALGLSSEFCGED----GMGGAFSVEHVGSLAAEAMSLVDADGGAEVGDGCSHPLLEAKTPRELALLVKHYRLLQGAKGAETLLAVTGRGGGEAASPSGWDVSQLSVGDRIGKNSFLRVIVETIATGRGE-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTMRHPASGTTFSWITAGVKDTAGTELHEGASYRLVATVKEAVP-GAAGWAGAVGVARCRLTLVTPNSGG 269
            MSMS ALGLSS F G+D    GMGGAFSVEHVGSLAAEAMSLVDADG AEV + CSHPLLEAKTPRELALLVKHYRLLQGAK AET L VTGRG  +  S  GWD+SQL VGDRIGK+SFLRVIVE I  G  E +        XXXXXXXXXXXXXXXXXX                                          TV MRHP+SGT FSW T+GVKDT+G ELHEGASYRLVATV EA+  G A  AG VG+ RCRLTLVT ++ G
Sbjct:  270 MSMSAALGLSSGFRGDDAGTDGMGGAFSVEHVGSLAAEAMSLVDADGAAEVENACSHPLLEAKTPRELALLVKHYRLLQGAKTAETTLTVTGRGANDGTSSPGWDLSQLCVGDRIGKDSFLRVIVEAILLGYEEGQDDDESEDFXXXXXXXXXXXXXXXXXXDEDGCERSFSKPHPKTKRRRFPRAPIRTRPWRKKKPFAAGSATVRMRHPSSGTIFSWRTSGVKDTSGAELHEGASYRLVATVTEALAAGGAEEAGEVGLTRCRLTLVTADASG 544
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BLAST of mRNA_L-elsbetiae_contig7460.16347.1 vs. uniprot
Match: A0A6H5L5W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W6_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 7.180e-58
Identity = 135/239 (56.49%), Postives = 149/239 (62.34%), Query Frame = 0 
Query:   36 MSLVDADGGAEVGDGCSHPLLEAKTPRELALLVKHYRLLQGAKGAETLLAVTGRGGGEAASPSGWDVSQLSVGDRIGKNSFLRVIVETIATG----RGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVTMRHPASGTTFSWITAGVKDTAGTELHEGASYRLVATVKEAVP-GAAGWAGAVGVARCRLTLVTPNSGG 269
            MSLVDADG AEV + C HPLLEAKTPRELALLVKHYRLLQGAK AET L VTGRG  +  SP GWD+SQL VGDRIGK+SFLRV+VE I  G    + ++     XXXXXXXXXXXXXXXX                                               TV MRHP+SGT FSW T+GVKDT+G ELHEGASYRLVATV EA+  G     G +GV RCRLTLVT  + G
Sbjct:    1 MSLVDADGAAEVENACLHPLLEAKTPRELALLVKHYRLLQGAKAAETTLTVTGRGANDGISPPGWDLSQLYVGDRIGKDSFLRVVVEAILLGYEEGQDDDESEDLXXXXXXXXXXXXXXXXYDDGDGYERSFSKPHQRTKRRRFPRAHIRSRPSPRWSKKKPFAAGSATVRMRHPSSGTIFSWKTSGVKDTSGAELHEGASYRLVATVAEALAVGGTKGPGEIGVTRCRLTLVTAAASG 239
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7460.16347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIE4_ECTSI6.550e-7462.55Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6H5L5W6_9PHAE7.180e-5856.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7460contigL-elsbetiae_contig7460:478..2225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7460.16347.1mRNA_L-elsbetiae_contig7460.16347.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7460 473..2609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7460.16347.1 ID=prot_L-elsbetiae_contig7460.16347.1|Name=mRNA_L-elsbetiae_contig7460.16347.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=271bp
MSMSTALGLSSEFCGEDGMGGAFSVEHVGSLAAEAMSLVDADGGAEVGDG
CSHPLLEAKTPRELALLVKHYRLLQGAKGAETLLAVTGRGGGEAASPSGW
DVSQLSVGDRIGKNSFLRVIVETIATGRGEEEEEEEESEDGGWGDEEELD
DFDDFDDDENEEEEEGAGHKRKKPKKKAAKRTFSRRRPQKKKSSSVAAAT
VTMRHPASGTTFSWITAGVKDTAGTELHEGASYRLVATVKEAVPGAAGWA
GAVGVARCRLTLVTPNSGGT*
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