prot_L-elsbetiae_contig7450.16338.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7450.16338.1
Unique Nameprot_L-elsbetiae_contig7450.16338.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length149
Homology
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BLAST of mRNA_L-elsbetiae_contig7450.16338.1 vs. uniprot
Match: A0A6H5KNK6_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNK6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.350e-15
Identity = 61/111 (54.95%), Postives = 70/111 (63.06%), Query Frame = 0 
Query:   30 GSSSKGKMGKLRKSLSRRLSLSRRSSSGSTPQHDGYSAGFTSVAGTDEARNGRDATGDQEQPXXXXXXXXXXXPSPGVAVVYSPMAAPAPRRAP-----VSPALPGAPVSS 135
            G++SKGKMGK+RKSLSRRLSLSRRSSS STP H+ YS GFTSVAG++E R  RD   + EQ               GV VV+  M  P  R AP     +SP  PGAPVSS
Sbjct:   44 GTNSKGKMGKIRKSLSRRLSLSRRSSSSSTPNHERYS-GFTSVAGSEEGRYDRDGVPENEQALASPA---------GVPVVFPGMGPPVARGAPQGRNLLSPVPPGAPVSS 144
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7450.16338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNK6_9PHAE1.350e-1554.95Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7450contigL-elsbetiae_contig7450:4901..7834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7450.16338.1mRNA_L-elsbetiae_contig7450.16338.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7450 4833..7834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7450.16338.1 ID=prot_L-elsbetiae_contig7450.16338.1|Name=mRNA_L-elsbetiae_contig7450.16338.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
MRRTSGGSAGDIGAPSGGNGSANSVSGPVGSSSKGKMGKLRKSLSRRLSL
SRRSSSGSTPQHDGYSAGFTSVAGTDEARNGRDATGDQEQPEQPEQPEQP
EWPSPGVAVVYSPMAAPAPRRAPVSPALPGAPVSSSAAAAAAAEAHAAA
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