mRNA_L-elsbetiae_contig736.16231.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: D8LM69_ECTSI (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM69_ECTSI) HSP 1 Score: 451 bits (1159), Expect = 3.000e-157 Identity = 214/236 (90.68%), Postives = 230/236 (97.46%), Query Frame = 3 Query: 453 MMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRVGSCADEDEE 1160 MMAEECILVDR+DRPTG ASKVETHLTSKGL+LHRAFSVFLFDK+GR+LMQRRADSKHTFAG+WTNTCCSHPLWNDVEMGTD+TTP+G+K+ASEGDAAI GATRAAVRKLGQELGI A QLPLEDFSFLTKVHYIANSGSTWGEHEIDYV+LIQADVDL+PNPNEVSDAEFLDK+GLRSLLA AERGEVEFTPWSAY+IDKFVFGWWDHVGDK+KLAS RDS+IHRVGSCADE+EE Sbjct: 1 MMAEECILVDRNDRPTGSASKVETHLTSKGLLLHRAFSVFLFDKKGRVLMQRRADSKHTFAGYWTNTCCSHPLWNDVEMGTDMTTPRGEKSASEGDAAIAGATRAAVRKLGQELGIPAAQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVYLIQADVDLEPNPNEVSDAEFLDKDGLRSLLARAERGEVEFTPWSAYIIDKFVFGWWDHVGDKEKLASLRDSVIHRVGSCADEEEE 236
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A835Z702_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z702_9STRA) HSP 1 Score: 290 bits (742), Expect = 4.300e-93 Identity = 142/247 (57.49%), Postives = 176/247 (71.26%), Query Frame = 3 Query: 411 FAEELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEG-DAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANS-GSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRVGSCA 1145 F +ELG +D EQAAMM E CI+VDRDD+P A+KV+ HL S+GL LHRAFSVFLFD GR+L+QRRA SKHTF G+WTN CCSHPLWND EMG D GD ++S +AA GA RAA RKL QELG+ A QLP +T++HY A S WGEHE+DY+FL QADVD+ PN NEV++A ++ + LR+LLA A+ G+ FTPWS ++ID F WWD +G+ L + D +IHRVG CA Sbjct: 55 FTDELGQIDPEQAAMMEELCIVVDRDDKPLAPATKVQAHLCSEGLALHRAFSVFLFDSSGRMLLQRRALSKHTFPGYWTNACCSHPLWNDFEMGLD-----GDADSSSALEAAARGARRAAARKLEQELGVPAGQLPESALRLMTRIHYRAESEDGVWGEHEVDYIFLAQADVDVAPNANEVAEAAYVTRAELRALLARADAGDARFTPWSRHVIDAFAHAWWDALGNAAALDALADEVIHRVGDCA 296
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A7S2UUE2_9STRA (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE2_9STRA) HSP 1 Score: 263 bits (671), Expect = 6.360e-82 Identity = 134/246 (54.47%), Postives = 172/246 (69.92%), Query Frame = 3 Query: 423 LGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDA-EFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRD--SLIHRVGSCADE 1151 +G D+EQ MM E I VDR D+ G ASK ETHL S GL LHRAFSVFLFD +GR+L+Q+R+ K TF +WTNTCCSHPL E+GTD+ G N + AA G RAA+RKL QELGIS +L ++DF +LTK+HYIANS WGEHE+DYVF Q DV+L+ N NEV D +++ + LR ++ +A+RGE++ TPWS Y+ID+F+F WW VGD+ L + D S+IHRVG CA+E Sbjct: 69 VGQYDDEQIQMMEERVITVDRHDKVVGEASKAETHLVSHGLKLHRAFSVFLFDTQGRLLLQQRSRDKITFPWYWTNTCCSHPLSVPSELGTDVL-EAGTHNQDQ--AATLGCQRAAIRKLEQELGISPSELSVDDFIYLTKIHYIANSDPDWGEHEVDYVFFAQKDVNLNLNLNEVEDVVKYVTADELRDMMDQADRGEIKLTPWSRYIIDEFIFKWWPLVGDRKALEAQADDFSVIHRVGPCAEE 311
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: B8MES9_TALSN (Isopentenyl-diphosphate Delta-isomerase n=7 Tax=Eurotiales TaxID=5042 RepID=B8MES9_TALSN) HSP 1 Score: 224 bits (571), Expect = 1.040e-67 Identity = 116/225 (51.56%), Postives = 147/225 (65.33%), Query Frame = 3 Query: 420 ELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLT---SKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVG 1085 +L DEEQ +M E CI++D DDRP G ASK HL S+GL LHRAFSVFLFD + R+L+Q+RA K TF WTNTCCSHPL E G +L+ AA+ G RAAVRKL QELGI A+Q+PL+ F FLT++HY+A S WGEHEIDY+ IQADVD++PNPNEV D +++ E L+S+ A ++FTPW + + +F WW H G Sbjct: 47 DLDGYDEEQVRLMEEVCIVLDNDDRPIGSASKKACHLMTNISRGL-LHRAFSVFLFDSQNRLLLQQRAAEKITFPDLWTNTCCSHPLGIAGETGAELS------------AAVEGVKRAAVRKLDQELGIKAEQVPLDKFKFLTRIHYLAPSDGKWGEHEIDYILFIQADVDINPNPNEVQDTKYVTPEDLKSMFANPA---LKFTPWFKLICNTMLFEWWSHFG 255
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: R7QIF2_CHOCR (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIF2_CHOCR) HSP 1 Score: 222 bits (565), Expect = 6.820e-67 Identity = 115/241 (47.72%), Postives = 154/241 (63.90%), Query Frame = 3 Query: 435 DEEQAAMMAEECILVDRDDRPTGRASKVETHLTSKGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGS-TWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGE-VEFTPWSAYMIDKFVFGWWDHVGDKDK--LASFRDS-LIHRVGSC 1142 DE QA +M+EE ILV D G+ SK ++HL S L LHRAFS+FLFD GR+L+QRRA K TF +WTNT CSHPL N E+G + +GD ++ GA RAA+RKLG ELG+ L + D +F+T+VHY A +G WGEHE+DYVF+ Q DV+L P PNEVSD ++D++ L+ L AEAE+ E TPW ++++ F + WWD + +K L RD +H +G C Sbjct: 26 DETQAQLMSEEIILVSPADAVIGKMSKKDSHLVSNNLPLHRAFSLFLFDSAGRMLLQRRAAEKVTFPSYWTNTVCSHPLHNAAELGEE-----------DGDDSVVGAKRAAIRKLGHELGVKEGSLGIADLTFMTRVHYRAENGDGVWGEHEVDYVFVAQRDVELRPEPNEVSDVRYVDQKELKELFAEAEKSEGTLLTPWFQHIVNGFGWPWWDSLLEKGPPGLEGLRDPHTVHHMGDC 255
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A1Y2CTN6_9FUNG (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CTN6_9FUNG) HSP 1 Score: 219 bits (557), Expect = 3.240e-66 Identity = 112/236 (47.46%), Postives = 154/236 (65.25%), Query Frame = 3 Query: 435 DEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRV 1133 DEEQ +M+E CILVD +D+P G SK E HL + KGL LHRAFSVFLF+ EG++L+Q+RAD K TF G++TNTCCSHPL E+ +A GA RAA RKL ELGI A+Q+PL+ F FLTK+ Y+A S WGEHEIDY+F ++ADVDL+PNPNEV +++ ++ L+ + A ++ + TPW + + F++ WWD++ + LA +IHR+ Sbjct: 10 DEEQVRLMSEMCILVDTNDKPIGAESKKECHLMTNINKGL-LHRAFSVFLFNSEGKLLLQQRADEKITFPGYYTNTCCSHPLAVQDEVE---------------EAEQIGARRAAQRKLEHELGIKAEQVPLDKFQFLTKIQYLAPSDGLWGEHEIDYIFFVKADVDLEPNPNEVKSVKYITQDELKQMFATMDQTGISMTPWFKLICENFLYKWWDNLDNVTSLAE--PDVIHRM 227
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: C3Z399_BRAFL (Isopentenyl-diphosphate Delta-isomerase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z399_BRAFL) HSP 1 Score: 216 bits (551), Expect = 2.660e-65 Identity = 112/237 (47.26%), Postives = 149/237 (62.87%), Query Frame = 3 Query: 432 LDEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSLIHRV 1133 LD+ Q ++ E+CIL+D +D+ TG +K HL KGL LHRAFSVFLF+ +G +L+Q+R+D K TF G++TNTCCSHPL E+ +A G RAA RKL ELGISADQ+PLEDF FLT++HY A S WGEHEIDY+ IQ +VD++PNPNEV ++++KE LR L A+ TPW ++D+F++ WWD + D D L IHR+ Sbjct: 9 LDDTQVKLLGEQCILIDENDKVTGFETKKNCHLNENIKKGL-LHRAFSVFLFNSKGELLLQQRSDEKITFPGYFTNTCCSHPLNLPDELE---------------EAQAMGVLRAAQRKLDHELGISADQVPLEDFHFLTRIHYRAESDGRWGEHEIDYILFIQKEVDVNPNPNEVKTFQYINKEQLRHFLETAKEEGRPITPWFQLIVDRFLYSWWDKLHDVDSLKD--QDTIHRI 227
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A7C8PEN1_ORBOL (Isopentenyl-diphosphate Delta-isomerase n=8 Tax=Orbiliaceae TaxID=47021 RepID=A0A7C8PEN1_ORBOL) HSP 1 Score: 220 bits (560), Expect = 2.880e-65 Identity = 119/239 (49.79%), Postives = 148/239 (61.92%), Query Frame = 3 Query: 408 AFAEELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRD 1115 A + EL D EQ +M E CI++D DD+P G ASK HL + KGL LHRAFSVFLFD EGR+L+Q+RAD K TF G WTNTCCSHPL E G L +AAI G RAA RKL QELGI A Q+PL+DF FLT++HY A S WGEHEIDY+ IQ VDL PNPNEV D +++ + L+ + + + FTPW + + +F WW + D K A+ +D Sbjct: 106 ARSSELEGYDAEQVRLMDEVCIVLDEDDKPIGSASKKTCHLMANIDKGL-LHRAFSVFLFDPEGRLLLQQRADEKITFPGLWTNTCCSHPLGIPGETGDTL------------EAAIVGVRRAAQRKLDQELGIPAKQVPLDDFEFLTRIHYKAPSNGIWGEHEIDYILFIQTTVDLAPNPNEVKDTKYVTADELKEMFQDPA---LSFTPWFKLICETMLFEWWGSLKDLSKYANEQD 328
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A1S9RUA6_PENBI (Isopentenyl-diphosphate Delta-isomerase n=5 Tax=Penicillium TaxID=5073 RepID=A0A1S9RUA6_PENBI) HSP 1 Score: 218 bits (554), Expect = 3.650e-65 Identity = 113/229 (49.34%), Postives = 146/229 (63.76%), Query Frame = 3 Query: 408 AFAEELGVLDEEQAAMMAEECILVDRDDRPTGRASKVETHLTS---KGLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVG 1085 A + EL DEEQ +M E CI+ D DDRP G ASK HL + KGL LHRAFSVFLFD + R+L+Q+RA K TF WTNTCCSHPL E G +L DAA+ G RAA RKL ELGI A+Q+PL+ F F T++HY A S WGEHE+DY+ IQADVDL+P+PNEV D +++ + L+++ E+ ++FTPW + + +F WW H+G Sbjct: 43 AQSSELVGYDEEQVRLMEEVCIVTDNDDRPIGSASKKTCHLMTNIDKGL-LHRAFSVFLFDSKNRLLLQQRATEKITFPDMWTNTCCSHPLGIPGETGAEL------------DAAVMGVKRAAQRKLDHELGIKAEQVPLDKFEFFTRIHYKAPSDGKWGEHEVDYILFIQADVDLEPSPNEVRDTKYVSADELKAMF---EQPGLKFTPWFKLICNSMLFEWWSHLG 255
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Match: A0A0E9NIV4_SAICN (Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NIV4_SAICN) HSP 1 Score: 216 bits (551), Expect = 4.020e-65 Identity = 108/236 (45.76%), Postives = 151/236 (63.98%), Query Frame = 3 Query: 435 DEEQAAMMAEECILVDRDDRPTGRASKVETHLTSK--GLMLHRAFSVFLFDKEGRILMQRRADSKHTFAGFWTNTCCSHPLWNDVEMGTDLTTPKGDKNASEGDAAITGATRAAVRKLGQELGISADQLPLEDFSFLTKVHYIANSGSTWGEHEIDYVFLIQADVDLDPNPNEVSDAEFLDKEGLRSLLAEAERGEVEFTPWSAYMIDKFVFGWWDHVGDKDKLASFRDSL-IHRV 1133 D EQ +M E CI++D +D+P G ASK HL +LHRAFSVFLFD+E R+L+Q+RAD K TF G WTNTCCSHPL E G+DL +A+ G RAA+RKL QELGI A Q+P++ F++LT++HY+A S WGEHEIDY+ I+ V NPNE+ D +++ +E ++S+ + E +FTPW + + F+F WW + +KD LA+ +D IH++ Sbjct: 18 DPEQVKLMEEVCIVIDENDKPLGSASKKTCHLMENINNNLLHRAFSVFLFDEENRLLLQQRADEKITFPGMWTNTCCSHPLSIPSETGSDL------------PSAVLGVKRAAIRKLDQELGIPASQVPIDKFTYLTRIHYVAPSDGLWGEHEIDYILFIRVPVTHAANPNEIKDVKYVSREEMQSMFVDPAY-EGKFTPWFKLICETFLFKWWKELEEKDDLAAVKDEENIHKL 240 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig736.16231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig736.16231.1 >prot_L-elsbetiae_contig736.16231.1 ID=prot_L-elsbetiae_contig736.16231.1|Name=mRNA_L-elsbetiae_contig736.16231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp MTFSWSAPASVLAVLLAAASCPAEGFFVPGSHSFGHSLLQQQQDACAAASback to top mRNA from alignment at L-elsbetiae_contig736:21009..26524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig736.16231.1 ID=mRNA_L-elsbetiae_contig736.16231.1|Name=mRNA_L-elsbetiae_contig736.16231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5516bp|location=Sequence derived from alignment at L-elsbetiae_contig736:21009..26524- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig736:21009..26524- >mRNA_L-elsbetiae_contig736.16231.1 ID=mRNA_L-elsbetiae_contig736.16231.1|Name=mRNA_L-elsbetiae_contig736.16231.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2322bp|location=Sequence derived from alignment at L-elsbetiae_contig736:21009..26524- (Laminarionema elsbetiae ELsaHSoW15)back to top |