mRNA_L-elsbetiae_contig736.16229.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A6H5KC08_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC08_9PHAE) HSP 1 Score: 307 bits (786), Expect = 1.820e-98 Identity = 161/249 (64.66%), Postives = 194/249 (77.91%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748 W+L+LR+ P TM VKG+S IA CHMLS V A+IG+G AGAV VH+VKA EPLFTALFSAIFL Q FSPLVYLTLVPV+ GV + SL L F W A GA+GSN+AASTR + SKR MG DMGKNMSPANL AV++IMAS M +PL ++E +++++WE+ V +P++G +II+ V S VFFYL+NEVAFRCLG VHPVTHAVGNTFKRVFL+A S IVFKS L P A+GS +AI GVL+Y L Sbjct: 134 WMLKLRDAPGLTMANVKGLSPIAACHMLSHVCAVIGLG---AGAVSFVHIVKAAEPLFTALFSAIFLGQIFSPLVYLTLVPVVAGVALASLKELDFKWAALGGAMGSNLAASTRAILSKRSMGMDMGKNMSPANLYAVLTIMASAMLLPLSAIVEGPKIQELWESTVTTPEKGNEIIYNTVASGVFFYLYNEVAFRCLGVVHPVTHAVGNTFKRVFLIATSIIVFKSKLTPLAAMGSFMAIAGVLLYSL 379
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A836CHH7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA) HSP 1 Score: 226 bits (576), Expect = 4.300e-67 Identity = 124/249 (49.80%), Postives = 169/249 (67.87%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748 W+LRLR P +M +K +S I +CH +S + A+IG+G AG+V H+VKA EP FTALFSAIFLKQ F VYL+LVPV+ GV + SL L+F+W A GA+GSNVAAS+R + +KR MG G NM ANL V++I+A+ M VP+ V+E + W+A + + I + ++S ++FYL+NEVAF L VHPV HAVGNT KRVF++A+ I+F + + P VGSS+AIVGVL++ L Sbjct: 132 WLLRLRAAPGLSMDNIKTLSPIGLCHAISHLSAVIGLG---AGSVSFTHIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKELNFSWTALCGAMGSNVAASSRAILAKRSMGRPKGTNMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAALLKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKITPLGMVGSSLAIVGVLIFSL 377
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: D7FK20_ECTSI (Glucose-6-phosphate/phosphate translocator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK20_ECTSI) HSP 1 Score: 218 bits (556), Expect = 5.340e-64 Identity = 115/192 (59.90%), Postives = 146/192 (76.04%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNE 577 W+L+LR+ P TM VKG+S IA CHMLS V A+IG+G AGAV VH+VKA EPLFTALFSA+FL Q FSPLVYLTLVPV+ GV + SL L F W A GA+GSN+AASTR + SKR MG DMGKNMSPANL AV++IMAS M +PL ++E +++++WE+ V +P++G +II+ V S VFFYL++ Sbjct: 134 WMLKLRDAPGLTMANVKGLSPIATCHMLSHVCAVIGLG---AGAVSFVHIVKAAEPLFTALFSAVFLGQIFSPLVYLTLVPVVAGVALASLKELDFKWAALGGAMGSNLAASTRAILSKRSMGMDMGKNMSPANLYAVLTIMASAMLLPLSAMVEGPKIKELWESTVTTPEKGNEIIYNTVASGVFFYLYSH 322
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.010e-62 Identity = 113/250 (45.20%), Postives = 171/250 (68.40%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751 W+ +R P+ ++ VK I +A H ++ + A+I +G AGAV H++KA EP FT+LFSA+FLKQ FSP+VY +L+PV+ GV + SL F+W AF A+ +N A++ R +F+K+ M G+NM PANL AV++I+A+++ P+ ++E S+++ WEA + + + +I YIV S ++FYL+NEVAF L VHPVTHAVGNT KRV ++ AS +VFK+ + + +GS++AI GVL+Y LA Sbjct: 152 WLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLG---AGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAVTSQRQ-LINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPITLQGYIGSAVAIAGVLLYSLA 397
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A8J6C741_DIALT (TPT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT) HSP 1 Score: 208 bits (529), Expect = 2.650e-60 Identity = 111/250 (44.40%), Postives = 161/250 (64.40%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751 W+ LR P+ + +K + IA+ H + + +I +G AGAV H+VKA EP F+ + SAIF K F VYL L+PV+ GVG+ SL LSF+W AF+ A+GSN A S R +FSK+ M G+NM ANL V++IM+ +M +P +V+E ++++ W A + + ++ +VS +F+YL+NEVAF CL VHP+THAVGNT KRV ++ AS +VF + + P +GSS+AI GVL+Y LA Sbjct: 119 WMSPLRKAPKLSSENIKALMPIALMHGIGHLCTVISLG---AGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLA 365
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A7S1XYR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYR7_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.630e-59 Identity = 114/252 (45.24%), Postives = 161/252 (63.89%), Query Frame = 2 Query: 2 WVLRL--RNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751 W+L+L R P TM VK + IA CH + +I + AG+V H+VKA EP F+ + SA+FLK F VYLTL+P++VGV M SL LSF W +F+ A+ SN A S R +FSK+ M MG+NMS NL AV++IM+ + PL V+E ++ W++ + + E ++ I++S + +YL+NEVAF L VHP+THAVGNT KRV ++ AS I FK+ + ++ +GSSIAI GVL+Y LA Sbjct: 121 WLLKLGGRKAPVLTMENVKTLMPIATCHTTGHLCTVISLS---AGSVSFTHIVKAAEPFFSTVMSAVFLKSFFKLPVYLTLIPIVVGVAMASLKELSFTWVSFLNAMASNTAFSMRAIFSKKQMNAPMGENMSAPNLYAVLTIMSFLGLAPLAGVIEGRKIGPAWDSALSAGLESSELTKKILMSGLSYYLYNEVAFLALNAVHPITHAVGNTIKRVVIIVASVIFFKTKMSMQSIIGSSIAIFGVLLYSLA 369
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A835ZAU1_9STRA (Triosephosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU1_9STRA) HSP 1 Score: 205 bits (522), Expect = 3.310e-59 Identity = 109/251 (43.43%), Postives = 162/251 (64.54%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIF-YIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751 W+LRLR P+ ++ +KG++ I CH + +I +G AGAV H+VKA EPLF+ L SAI LK F VY+TL+P++ GV + S+ L+F+W +F+ A+GSN A S R +FSK M GKNM+P NL AV++IMA + +PL +++E S+++ +E + G + + + + +YL+NEVAF LG+VHP+THAVGNT KRV +L AS I F + + P + GS++A+ G L+Y LA Sbjct: 123 WLLRLRAAPQLSLDNIKGLTGITACHTAGHIMTVISLG---AGAVSFTHIVKAAEPLFSTLMSAIVLKSTFPWQVYMTLLPIVAGVAIASMTELTFSWVSFLNAMGSNTAFSLRAIFSKMAMNKPQGKNMTPPNLYAVLTIMAFIGVLPLTLLVEGSKIQSAFETGIAGYVGGANKFWTHFFACGLSYYLYNEVAFLALGQVHPITHAVGNTIKRVVILIASVIAFGTKMRPMSIAGSAMAVSGTLLYSLA 370
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A835ZDI5_9STRA (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA) HSP 1 Score: 199 bits (506), Expect = 6.300e-57 Identity = 116/250 (46.40%), Postives = 159/250 (63.60%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPL-VYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748 W L+LR P+ + +K + +A H S + A+IG+G AGAV VH+VKA EPLFTA SA+ L Q F PL VY +L+PV+ GV + S+ LSF+W AF GA+GSNVAA+TR V +K+ MG NM P NL V++++A+ + P +V+E R++ VW A + I +++S ++FYL+NEVAF CL + THAVGNT KRV LL S +VF L P A GS++AI GVL+Y L Sbjct: 68 WGLKLRKAPKLSKANLKTVFPLAALHTTSHISAVIGLG---AGAVGFVHVVKALEPLFTAALSALLL-QKFMPLPVYASLLPVVGGVALASMKELSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAPNMDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAAGHTSRAIWRGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLTPLGATGSAVAIGGVLVYSL 313
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: D8LC95_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.530e-56 Identity = 105/249 (42.17%), Postives = 162/249 (65.06%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748 W+ +LR P+ + +S +A H ++ V A++ +G AGAV H+VKA EP+FTA FSA L Q F+ VYL+L+P+I GV + SL LSF+W AF A+GSN A++ R + K+ MG +G+NMSPANL AV++++A P+ +++E + + W+A + + + + I++S +F+YL+NEVAF L V+PVTHAVGNT KRV ++ A+ I F++ + P + GS+IA+ G L+Y L Sbjct: 154 WLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLG---AGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSL 399
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A6H5KYA6_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYA6_9PHAE) HSP 1 Score: 199 bits (505), Expect = 2.660e-56 Identity = 109/250 (43.60%), Postives = 161/250 (64.40%), Query Frame = 2 Query: 2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751 W L +R P+ + +K + +A H S + A++G+ AGA+ V +VKA EPLFTALFSA+FL Q F+ VY L+PV+ GV + SL LSF W AF GA+ SNVAA++R V +K M G+NM NL V++I+A++M P ++E +++ +++ + + + + ++S +FFY++NEVAF CL +HPVTHAV NT KRVFL+A S +VF L P ++GS++AI GVL+Y LA Sbjct: 156 WALGVRKAPKLSGENLKAVLPLAALHTTSHIAAVVGLS---AGAIGFVQIVKAGEPLFTALFSALFLGQIFALPVYAALLPVVGGVAIASLKELSFTWLAFGGAMTSNVAAASRGVLAKASMDKPKGENMDAGNLYGVMTILATIMLAPFAWLVEGKQLQGLYDTAIAAGHTKKTLAKGALLSGIFFYMYNEVAFYCLDAIHPVTHAVANTVKRVFLIAVSILVFGHKLTPLGSIGSAVAIAGVLLYSLA 402 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig736.16229.1 >prot_L-elsbetiae_contig736.16229.1 ID=prot_L-elsbetiae_contig736.16229.1|Name=mRNA_L-elsbetiae_contig736.16229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp MTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFback to top mRNA from alignment at L-elsbetiae_contig736:2976..6541+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig736.16229.1 ID=mRNA_L-elsbetiae_contig736.16229.1|Name=mRNA_L-elsbetiae_contig736.16229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3566bp|location=Sequence derived from alignment at L-elsbetiae_contig736:2976..6541+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig736:2976..6541+ >mRNA_L-elsbetiae_contig736.16229.1 ID=mRNA_L-elsbetiae_contig736.16229.1|Name=mRNA_L-elsbetiae_contig736.16229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig736:2976..6541+ (Laminarionema elsbetiae ELsaHSoW15)back to top |