mRNA_L-elsbetiae_contig736.16229.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig736.16229.1
Unique NamemRNA_L-elsbetiae_contig736.16229.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A6H5KC08_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC08_9PHAE)

HSP 1 Score: 307 bits (786), Expect = 1.820e-98
Identity = 161/249 (64.66%), Postives = 194/249 (77.91%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748
            W+L+LR+ P  TM  VKG+S IA CHMLS V A+IG+G   AGAV  VH+VKA EPLFTALFSAIFL Q FSPLVYLTLVPV+ GV + SL  L F W A  GA+GSN+AASTR + SKR MG DMGKNMSPANL AV++IMAS M +PL  ++E  +++++WE+ V +P++G +II+  V S VFFYL+NEVAFRCLG VHPVTHAVGNTFKRVFL+A S IVFKS L P  A+GS +AI GVL+Y L
Sbjct:  134 WMLKLRDAPGLTMANVKGLSPIAACHMLSHVCAVIGLG---AGAVSFVHIVKAAEPLFTALFSAIFLGQIFSPLVYLTLVPVVAGVALASLKELDFKWAALGGAMGSNLAASTRAILSKRSMGMDMGKNMSPANLYAVLTIMASAMLLPLSAIVEGPKIQELWESTVTTPEKGNEIIYNTVASGVFFYLYNEVAFRCLGVVHPVTHAVGNTFKRVFLIATSIIVFKSKLTPLAAMGSFMAIAGVLLYSL 379          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A836CHH7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA)

HSP 1 Score: 226 bits (576), Expect = 4.300e-67
Identity = 124/249 (49.80%), Postives = 169/249 (67.87%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748
            W+LRLR  P  +M  +K +S I +CH +S + A+IG+G   AG+V   H+VKA EP FTALFSAIFLKQ F   VYL+LVPV+ GV + SL  L+F+W A  GA+GSNVAAS+R + +KR MG   G NM  ANL  V++I+A+ M VP+  V+E  +    W+A +      + I  + ++S ++FYL+NEVAF  L  VHPV HAVGNT KRVF++A+  I+F + + P   VGSS+AIVGVL++ L
Sbjct:  132 WLLRLRAAPGLSMDNIKTLSPIGLCHAISHLSAVIGLG---AGSVSFTHIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKELNFSWTALCGAMGSNVAASSRAILAKRSMGRPKGTNMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAALLKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKITPLGMVGSSLAIVGVLIFSL 377          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: D7FK20_ECTSI (Glucose-6-phosphate/phosphate translocator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK20_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 5.340e-64
Identity = 115/192 (59.90%), Postives = 146/192 (76.04%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNE 577
            W+L+LR+ P  TM  VKG+S IA CHMLS V A+IG+G   AGAV  VH+VKA EPLFTALFSA+FL Q FSPLVYLTLVPV+ GV + SL  L F W A  GA+GSN+AASTR + SKR MG DMGKNMSPANL AV++IMAS M +PL  ++E  +++++WE+ V +P++G +II+  V S VFFYL++ 
Sbjct:  134 WMLKLRDAPGLTMANVKGLSPIATCHMLSHVCAVIGLG---AGAVSFVHIVKAAEPLFTALFSAVFLGQIFSPLVYLTLVPVVAGVALASLKELDFKWAALGGAMGSNLAASTRAILSKRSMGMDMGKNMSPANLYAVLTIMASAMLLPLSAMVEGPKIKELWESTVTTPEKGNEIIYNTVASGVFFYLYSH 322          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.010e-62
Identity = 113/250 (45.20%), Postives = 171/250 (68.40%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751
            W+  +R  P+ ++  VK I  +A  H ++ + A+I +G   AGAV   H++KA EP FT+LFSA+FLKQ FSP+VY +L+PV+ GV + SL    F+W AF  A+ +N A++ R +F+K+ M    G+NM PANL AV++I+A+++  P+  ++E S+++  WEA +    + + +I YIV S ++FYL+NEVAF  L  VHPVTHAVGNT KRV ++ AS +VFK+ +  +  +GS++AI GVL+Y LA
Sbjct:  152 WLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLG---AGAVSFTHIIKAAEPAFTSLFSALFLKQYFSPVVYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGIFAKKTMKEPQGQNMDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAVTSQRQ-LINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPITLQGYIGSAVAIAGVLLYSLA 397          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A8J6C741_DIALT (TPT domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C741_DIALT)

HSP 1 Score: 208 bits (529), Expect = 2.650e-60
Identity = 111/250 (44.40%), Postives = 161/250 (64.40%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751
            W+  LR  P+ +   +K +  IA+ H +  +  +I +G   AGAV   H+VKA EP F+ + SAIF K  F   VYL L+PV+ GVG+ SL  LSF+W AF+ A+GSN A S R +FSK+ M    G+NM  ANL  V++IM+ +M +P  +V+E ++++  W A + +      ++   +VS +F+YL+NEVAF CL  VHP+THAVGNT KRV ++ AS +VF + + P   +GSS+AI GVL+Y LA
Sbjct:  119 WMSPLRKAPKLSSENIKALMPIALMHGIGHLCTVISLG---AGAVSFTHIVKAAEPFFSTVMSAIFTKSYFPVPVYLALLPVVGGVGIASLTELSFSWVAFLNAMGSNTAFSLRAIFSKKAMEKPQGENMGAANLYGVLTIMSFLMLLPFALVLEGAKLKGGWAAAIAAGHTANYLLKTSLVSGLFYYLYNEVAFLCLDNVHPITHAVGNTIKRVVIILASVVVFGTKMTPLNQIGSSLAIFGVLLYSLA 365          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A7S1XYR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYR7_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.630e-59
Identity = 114/252 (45.24%), Postives = 161/252 (63.89%), Query Frame = 2
Query:    2 WVLRL--RNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751
            W+L+L  R  P  TM  VK +  IA CH    +  +I +    AG+V   H+VKA EP F+ + SA+FLK  F   VYLTL+P++VGV M SL  LSF W +F+ A+ SN A S R +FSK+ M   MG+NMS  NL AV++IM+ +   PL  V+E  ++   W++ + +  E  ++   I++S + +YL+NEVAF  L  VHP+THAVGNT KRV ++ AS I FK+ +  ++ +GSSIAI GVL+Y LA
Sbjct:  121 WLLKLGGRKAPVLTMENVKTLMPIATCHTTGHLCTVISLS---AGSVSFTHIVKAAEPFFSTVMSAVFLKSFFKLPVYLTLIPIVVGVAMASLKELSFTWVSFLNAMASNTAFSMRAIFSKKQMNAPMGENMSAPNLYAVLTIMSFLGLAPLAGVIEGRKIGPAWDSALSAGLESSELTKKILMSGLSYYLYNEVAFLALNAVHPITHAVGNTIKRVVIIVASVIFFKTKMSMQSIIGSSIAIFGVLLYSLA 369          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A835ZAU1_9STRA (Triosephosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAU1_9STRA)

HSP 1 Score: 205 bits (522), Expect = 3.310e-59
Identity = 109/251 (43.43%), Postives = 162/251 (64.54%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIF-YIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751
            W+LRLR  P+ ++  +KG++ I  CH    +  +I +G   AGAV   H+VKA EPLF+ L SAI LK  F   VY+TL+P++ GV + S+  L+F+W +F+ A+GSN A S R +FSK  M    GKNM+P NL AV++IMA +  +PL +++E S+++  +E  +     G +  + +     + +YL+NEVAF  LG+VHP+THAVGNT KRV +L AS I F + + P +  GS++A+ G L+Y LA
Sbjct:  123 WLLRLRAAPQLSLDNIKGLTGITACHTAGHIMTVISLG---AGAVSFTHIVKAAEPLFSTLMSAIVLKSTFPWQVYMTLLPIVAGVAIASMTELTFSWVSFLNAMGSNTAFSLRAIFSKMAMNKPQGKNMTPPNLYAVLTIMAFIGVLPLTLLVEGSKIQSAFETGIAGYVGGANKFWTHFFACGLSYYLYNEVAFLALGQVHPITHAVGNTIKRVVILIASVIAFGTKMRPMSIAGSAMAVSGTLLYSLA 370          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A835ZDI5_9STRA (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA)

HSP 1 Score: 199 bits (506), Expect = 6.300e-57
Identity = 116/250 (46.40%), Postives = 159/250 (63.60%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPL-VYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748
            W L+LR  P+ +   +K +  +A  H  S + A+IG+G   AGAV  VH+VKA EPLFTA  SA+ L Q F PL VY +L+PV+ GV + S+  LSF+W AF GA+GSNVAA+TR V +K+ MG     NM P NL  V++++A+ +  P  +V+E  R++ VW A   +      I   +++S ++FYL+NEVAF CL  +   THAVGNT KRV LL  S +VF   L P  A GS++AI GVL+Y L
Sbjct:   68 WGLKLRKAPKLSKANLKTVFPLAALHTTSHISAVIGLG---AGAVGFVHVVKALEPLFTAALSALLL-QKFMPLPVYASLLPVVGGVALASMKELSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAPNMDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAAGHTSRAIWRGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLTPLGATGSAVAIGGVLVYSL 313          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: D8LC95_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC95_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 2.530e-56
Identity = 105/249 (42.17%), Postives = 162/249 (65.06%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRL 748
            W+ +LR  P+     +  +S +A  H ++ V A++ +G   AGAV   H+VKA EP+FTA FSA  L Q F+  VYL+L+P+I GV + SL  LSF+W AF  A+GSN A++ R +  K+ MG  +G+NMSPANL AV++++A     P+ +++E  + +  W+A + +    + +   I++S +F+YL+NEVAF  L  V+PVTHAVGNT KRV ++ A+ I F++ + P +  GS+IA+ G L+Y L
Sbjct:  154 WLTKLRKAPKLADGALGPLSQLAALHTVAHVTAVLSLG---AGAVSFTHIVKAAEPVFTAGFSAALLGQTFAAPVYLSLLPIIAGVSLASLKELSFSWVAFGNAMGSNTASALRGILGKKQMGKPVGENMSPANLYAVLTVLAFCFLSPVALLVEGRKAKPAWDAAIAAGATAKGLSSTILLSGLFYYLYNEVAFLALDSVNPVTHAVGNTIKRVVIIVAACIAFRTPMTPLSIAGSTIAVAGTLLYSL 399          
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Match: A0A6H5KYA6_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYA6_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 2.660e-56
Identity = 109/250 (43.60%), Postives = 161/250 (64.40%), Query Frame = 2
Query:    2 WVLRLRNVPRPTMTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALFSAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAASTRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDVWEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTFKRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLA 751
            W L +R  P+ +   +K +  +A  H  S + A++G+    AGA+  V +VKA EPLFTALFSA+FL Q F+  VY  L+PV+ GV + SL  LSF W AF GA+ SNVAA++R V +K  M    G+NM   NL  V++I+A++M  P   ++E  +++ +++  + +    + +    ++S +FFY++NEVAF CL  +HPVTHAV NT KRVFL+A S +VF   L P  ++GS++AI GVL+Y LA
Sbjct:  156 WALGVRKAPKLSGENLKAVLPLAALHTTSHIAAVVGLS---AGAIGFVQIVKAGEPLFTALFSALFLGQIFALPVYAALLPVVGGVAIASLKELSFTWLAFGGAMTSNVAAASRGVLAKASMDKPKGENMDAGNLYGVMTILATIMLAPFAWLVEGKQLQGLYDTAIAAGHTKKTLAKGALLSGIFFYMYNEVAFYCLDAIHPVTHAVANTVKRVFLIAVSILVFGHKLTPLGSIGSAVAIAGVLLYSLA 402          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig736.16229.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC08_9PHAE1.820e-9864.66TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CHH7_9STRA4.300e-6749.80Plastidic triose-phosphate/phosphate translocator ... [more]
D7FK20_ECTSI5.340e-6459.90Glucose-6-phosphate/phosphate translocator n=1 Tax... [more]
A0A4D9DFS8_9STRA2.010e-6245.20TPT domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A8J6C741_DIALT2.650e-6044.40TPT domain-containing protein n=2 Tax=Diacronema l... [more]
A0A7S1XYR7_9STRA1.630e-5945.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZAU1_9STRA3.310e-5943.43Triosephosphate/phosphate translocator n=1 Tax=Tri... [more]
A0A835ZDI5_9STRA6.300e-5746.40Triose-phosphate transporter family-domain-contain... [more]
D8LC95_ECTSI2.530e-5642.17TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5KYA6_9PHAE2.660e-5643.60TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig736contigL-elsbetiae_contig736:2976..6541 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score200.3
Seed ortholog evalue1e-48
Seed eggNOG ortholog2880.D7FK20
Preferred nameSLC35E3
KEGG koko:K06643,ko:K15285
KEGG Pathwayko01522,ko01524,ko04068,ko04110,ko04115,ko04120,ko04144,ko04151,ko04218,ko04919,ko05165,ko05169,ko05200,ko05202,ko05203,ko05205,ko05206,ko05214,ko05215,ko05218,ko05219,ko05220,map01522,map01524,map04068,map04110,map04115,map04120,map04144,map04151,map04218,map04919,map05165,map05169,map05200,map05202,map05203,map05205,map05206,map05214,map05215,map05218,map05219,map05220
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.carbohydrate transport
EggNOG OGsKOG1441@1,KOG1441@2759
EC2.3.2.27
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko04121,ko04131
Exons6
Model size1147
Cds size723
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig736.16229.1prot_L-elsbetiae_contig736.16229.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig736 3013..6154 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816818.956742-UTR-L-elsbetiae_contig736:2975..30121622816818.956742-UTR-L-elsbetiae_contig736:2975..3012Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig736 2976..3012 +
1691683837.4250214-UTR-L-elsbetiae_contig736:2975..30121691683837.4250214-UTR-L-elsbetiae_contig736:2975..3012Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig736 2976..3012 +
1622816819.048134-UTR-L-elsbetiae_contig736:6154..65411622816819.048134-UTR-L-elsbetiae_contig736:6154..6541Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig736 6155..6541 +
1691683837.5050058-UTR-L-elsbetiae_contig736:6154..65411691683837.5050058-UTR-L-elsbetiae_contig736:6154..6541Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig736 6155..6541 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816818.9680257-CDS-L-elsbetiae_contig736:3012..30911622816818.9680257-CDS-L-elsbetiae_contig736:3012..3091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 3013..3091 +
1691683837.44424-CDS-L-elsbetiae_contig736:3012..30911691683837.44424-CDS-L-elsbetiae_contig736:3012..3091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 3013..3091 +
1622816818.9801626-CDS-L-elsbetiae_contig736:3498..35711622816818.9801626-CDS-L-elsbetiae_contig736:3498..3571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 3499..3571 +
1691683837.455141-CDS-L-elsbetiae_contig736:3498..35711691683837.455141-CDS-L-elsbetiae_contig736:3498..3571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 3499..3571 +
1622816818.996278-CDS-L-elsbetiae_contig736:4160..42631622816818.996278-CDS-L-elsbetiae_contig736:4160..4263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 4161..4263 +
1691683837.466823-CDS-L-elsbetiae_contig736:4160..42631691683837.466823-CDS-L-elsbetiae_contig736:4160..4263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 4161..4263 +
1622816819.009881-CDS-L-elsbetiae_contig736:4749..49761622816819.009881-CDS-L-elsbetiae_contig736:4749..4976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 4750..4976 +
1691683837.4756608-CDS-L-elsbetiae_contig736:4749..49761691683837.4756608-CDS-L-elsbetiae_contig736:4749..4976Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 4750..4976 +
1622816819.0249982-CDS-L-elsbetiae_contig736:5478..55311622816819.0249982-CDS-L-elsbetiae_contig736:5478..5531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 5479..5531 +
1691683837.484748-CDS-L-elsbetiae_contig736:5478..55311691683837.484748-CDS-L-elsbetiae_contig736:5478..5531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 5479..5531 +
1622816819.0361838-CDS-L-elsbetiae_contig736:5966..61541622816819.0361838-CDS-L-elsbetiae_contig736:5966..6154Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 5967..6154 +
1691683837.494306-CDS-L-elsbetiae_contig736:5966..61541691683837.494306-CDS-L-elsbetiae_contig736:5966..6154Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig736 5967..6154 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig736.16229.1

>prot_L-elsbetiae_contig736.16229.1 ID=prot_L-elsbetiae_contig736.16229.1|Name=mRNA_L-elsbetiae_contig736.16229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
MTGVKGISLIAVCHMLSLVWALIGIGVWPAGAVPLVHMVKATEPLFTALF
SAIFLKQNFSPLVYLTLVPVIVGVGMISLGSLSFNWHAFVGAVGSNVAAS
TRTVFSKRLMGTDMGKNMSPANLCAVVSIMASVMFVPLWIVMEASRVEDV
WEAVVDSPDEGEDIIFYIVVSSVFFYLFNEVAFRCLGRVHPVTHAVGNTF
KRVFLLAASFIVFKSTLDPRTAVGSSIAIVGVLMYRLAGK*
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mRNA from alignment at L-elsbetiae_contig736:2976..6541+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig736.16229.1 ID=mRNA_L-elsbetiae_contig736.16229.1|Name=mRNA_L-elsbetiae_contig736.16229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3566bp|location=Sequence derived from alignment at L-elsbetiae_contig736:2976..6541+ (Laminarionema elsbetiae ELsaHSoW15)
GTGGGTGCTCAGGCTACGCAACGTCCCCCGCCCAACGATGACTGGTGTGA AAGGCATCAGCCTCATCGCCGTGTGCCACATGCTCAGTCTCGTGTGGGCC CTCATCGGGATTGGAGGTATCTTCACGCGTCATTTGATTTACGATGGCTC TTGGGTTAGAGGGGGGCGCCTGCTATTGGGCGTGAGGGTGTCCGTTTCTC CTCTGGTCCCTTGGGTTCAACGGCGTCAGCCAACAAGAAAGCCTTATCCC ATAAGCTCAGAATATGCTTATTATTTATTTTGTTTGGATAAGCAAGCACA CAACAAACGTTTCTACCGTTCTACGGTATACGCTCCTCATAGACTTAGCC TTGCAGCGTGATATCCGCTGGTTTTCTGCTCCCCTCCCTCGCACGCTCTC AAATTCAGAGCCTGCTAGCATATAGATTACTGCTGAATTGCTGATCAATA CGCCTTTCCTCGATACTTTCTCGTGCGTTTGGCCGCATTTCGTTTGGCAC TTGCTTGTATGTGTTGTCTTTAGTTTGGCCAGCCGGTGCGGTTCCCCTGG TGCACATGGTTAAGGCCACCGAGCCACTCTTCACCGCTCTCTTCAGGTGC GTCTTTCTATCTACGTAACAAGTTTCTGCTCACGCATGTACAATTGACAA GCAACACCTCCCTGCCAGCGTATGTATGGGAATGTAGCGTTATCTCTGAC CACTGCGGTAGAAGCGGTCACATCGTCATTTTATCCGATTCGACTGCCAG ATATCCGCCTGCTGTGCCCTTACCCTACTCTAGGAAGAGGATATTTCCTG GAAATATTGCAGACGTTCTGTCCCCGCGGGGATTATCACAACGTTTTTTT TGTCGGTGTAGAGAAGCCGAGAGGCGAGAGCAATCCATCGTAGGTGGTAT AAGAAAAACGCTGTCTCTAGCCGAGGGAGGGGGTGTCCCTGACCAGGCAT TTCTTGGGATCTGTCGTTACGTCCGCTCATGAATCGTTAACCTTGGATTT CATCAGAACTTTACTTCCTTGTTAAATATCATCCTCCCGTGTATGTATTT CTCCTGTTTTTTTCCTCGTACATATTTACTTCCATGACTCCCAGCGCTAT CTTCCTGAAGCAGAACTTCTCCCCCCTGGTGTACCTGACCCCGTATTTAT CCCGTTTTTTTCCCTCGTGCTTCCGTGACTCGCAGCGCTATCTTCCTGAA GCAGAACTTCTCCCCCCTGGTGTACCTGACCCTCGTGCCTGTCATCGTTG GTGTCGGAATGATATCCCTCGGGTCGCTCAGCTTCAACGTAAGCGCCACC TTAGCTGTATAGGGTTGCTGAATGGAAGAGAAACAGGGTGCTTGCTCCTC TACTCCCCCCTCCTTCCTACCGCTCTGTTCAGTCTCTGCAGCCACGATGG CCTACTTGGCTTGAGGAGAAGTACGATGTGGTCAGTGTTTGGGGCTGGGT ACTGTATCGCGGCGGGCGCTCTTATGAAGCTCTCAGGATCCGTCGTGTGT GGTCTGGTTTAGGTTTGTTCCATCGGTGCTCTTCATCTCTCCCTCCCCTC GTCCGTATAAGAACAGTAGTTAAGTTTTGAGAAGGCCAGACTGCGCGCTT GACAACAGATCAGGCCCCCATTACCTCCCAAGCTCTCTCTCTACAAGATA CGCATCCACGGCTACACTAATAGCTCGACGAATTCTTCGAAGTAACGCTC GGGTTTGAAATGCGCCTAAACAAGCCGTACTTGTGTCGAAACGCGCTTCT TCTACTCTCGGTACGGCCCCGCAGTGGCACGCCTTCGTCGGAGCCGTGGG ATCCAACGTCGCGGCTTCCACGCGCACCGTCTTCTCCAAGCGCCTGATGG GCACGGACATGGGCAAGAACATGAGCCCCGCTAACCTGTGCGCCGTTGTG AGCATCATGGCCTCGGTGATGTTTGTGCCCCTGTGGATCGTCATGGAGGC CTCCAGGGTCGAGGACGTGTGGGAGGCCGTCGTCGACTCCCCCGACGAGG GGTACGTCCCTGCGCCTTCCTCGTGATGTATCTAATAGTGTTTTATGTTT TGGCCCCCGATGGGAACTCCTCAGTCAGCACAGGCTGACGAGGTAAAAAG TACAGCAATACAATGGTTGGTGGAATTGTCTGATCTGACTAGATGCGATA ATGAGTAGTCTATTTTGCTAGTCTTTTGCTGGTTTTCGGAATGTCTGTGA GAAGTATGCGGCACTATGTAGTGCGCTGGTTGGCGTCTATTGTGGTGTTT CAGTTCAAGACTTCTTGCACGGCCGCTCGAGTAGACCTATGTAGACAACC GTTCCCATGGACTCTAACAAAACAAACGTTCCGGTGCTTGATGTAGGACA TACCCATCTCCTGAATATTATTTCCTGTCGCAAGCCTCACGGAAGACTTC GTACGTACACTCCCTGTCGTCATACGTCCAGCTTGCCCTACTGCTGTACC TGATCCCCACTTCTTCCTTTTTGTTCTTCTCTGCCCTCTGCTGGACTCCG CAGGGAGGATATCATCTTCTACATCGTGGTCAGCAGCGTGTTCTTCTACC TCTTCAGTAAGTGTTGGCACGTGTCTGCCTGTCAGCAAGCTGCCCTTCCT CCCCTCCCGCTGACCCTAAGCCAACCGCTGTGCTACAGCGTAAAGGAGAA GCAGATAGGCAGTCATGCACATGCAGCAGATCCGCGGAGATTATACCTTT GTGCCGTGGCCACGGCATGCCCACCAACAGGGAAATTCCAGCTGTTGTTA GATATACGTATGTAGTATAGGTCATGGCACGAACGAACGTGTATAAAACT TCCAGATGTCGGCGAAGTTTTCATGTACAGAGCACGGTTAGAATCGGCGG TGTTCCATGTTGAGACGACGGATGGTCCAGAGTGCAATGATTAGATAGAG CAAGGAAAAACGCACCCCCTCTCTCTGACTGTATCTTGCTGCTATGTATT ATGGCGCGTTTCCAACCCAAAACAAAAACGCCGTATCGCAGACGAAGTGG CCTTCCGGTGCCTGGGCCGCGTGCATCCCGTGACCCACGCCGTGGGCAAC ACCTTCAAGCGCGTCTTCCTCCTCGCCGCTTCATTCATCGTGTTCAAGTC CACGCTCGACCCCCGGACGGCCGTGGGCTCCTCCATAGCTATAGTAGGTG TGCTGATGTACCGTCTGGCCGGGAAGTGACGCGAAAAAGCACGACAACGC CACCAAGACCAGGCGCCGAAAAGGCGAGGCAGGACGGAGAGAAGGAGAGA CAGCGGCAGGCGGTGTTTAGCCTCATCATGTGGCATGTACGGACCAACGT GGAAAGAAGGCACACGCTTAACCGGCACTCACTCGAGATGCGGCAGACAC ACCACGCCAGCAAGAGCTTCTCACATTTTTGCCAGTACTAGCGTTTTGGT ACGCGTGGCTGATGGGTCTATCAAGCAGAGGGTTTTGAGGCCTAGGTCTC GTTTTCCCGATAGGAGGGTATGTCATGTCTCTGACCACTTCGGGGGGCGG GGGGTGGGGGTAGCTGAGCGTTCCGACAACGGAAGTCTTCCTCCTTCCGC TCGTGCTGTCTTTTAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig736:2976..6541+

>mRNA_L-elsbetiae_contig736.16229.1 ID=mRNA_L-elsbetiae_contig736.16229.1|Name=mRNA_L-elsbetiae_contig736.16229.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig736:2976..6541+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACTGGTGTGAAAGGCATCAGCCTCATCGCCGTGTGCCACATGCTCAG
TCTCGTGTGGGCCCTCATCGGGATTGGAGATGACTGGTGTGAAAGGCATC
AGCCTCATCGCCGTGTGCCACATGCTCAGTCTCGTGTGGGCCCTCATCGG
GATTGGAGTTTGGCCAGCCGGTGCGGTTCCCCTGGTGCACATGGTTAAGG
CCACCGAGCCACTCTTCACCGCTCTCTTCAGTTTGGCCAGCCGGTGCGGT
TCCCCTGGTGCACATGGTTAAGGCCACCGAGCCACTCTTCACCGCTCTCT
TCAGCGCTATCTTCCTGAAGCAGAACTTCTCCCCCCTGGTGTACCTGACC
CTCGTGCCTGTCATCGTTGGTGTCGGAATGATATCCCTCGGGTCGCTCAG
CTTCAACCGCTATCTTCCTGAAGCAGAACTTCTCCCCCCTGGTGTACCTG
ACCCTCGTGCCTGTCATCGTTGGTGTCGGAATGATATCCCTCGGGTCGCT
CAGCTTCAACTGGCACGCCTTCGTCGGAGCCGTGGGATCCAACGTCGCGG
CTTCCACGCGCACCGTCTTCTCCAAGCGCCTGATGGGCACGGACATGGGC
AAGAACATGAGCCCCGCTAACCTGTGCGCCGTTGTGAGCATCATGGCCTC
GGTGATGTTTGTGCCCCTGTGGATCGTCATGGAGGCCTCCAGGGTCGAGG
ACGTGTGGGAGGCCGTCGTCGACTCCCCCGACGAGGGTGGCACGCCTTCG
TCGGAGCCGTGGGATCCAACGTCGCGGCTTCCACGCGCACCGTCTTCTCC
AAGCGCCTGATGGGCACGGACATGGGCAAGAACATGAGCCCCGCTAACCT
GTGCGCCGTTGTGAGCATCATGGCCTCGGTGATGTTTGTGCCCCTGTGGA
TCGTCATGGAGGCCTCCAGGGTCGAGGACGTGTGGGAGGCCGTCGTCGAC
TCCCCCGACGAGGGGGAGGATATCATCTTCTACATCGTGGTCAGCAGCGT
GTTCTTCTACCTCTTCAGGAGGATATCATCTTCTACATCGTGGTCAGCAG
CGTGTTCTTCTACCTCTTCAACGAAGTGGCCTTCCGGTGCCTGGGCCGCG
TGCATCCCGTGACCCACGCCGTGGGCAACACCTTCAAGCGCGTCTTCCTC
CTCGCCGCTTCATTCATCGTGTTCAAGTCCACGCTCGACCCCCGGACGGC
CGTGGGCTCCTCCATAGCTATAGTAGGTGTGCTGATGTACCGTCTGGCCG
GGAAGTGAACGAAGTGGCCTTCCGGTGCCTGGGCCGCGTGCATCCCGTGA
CCCACGCCGTGGGCAACACCTTCAAGCGCGTCTTCCTCCTCGCCGCTTCA
TTCATCGTGTTCAAGTCCACGCTCGACCCCCGGACGGCCGTGGGCTCCTC
CATAGCTATAGTAGGTGTGCTGATGTACCGTCTGGCCGGGAAGTGA
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