mRNA_L-elsbetiae_contig7351.16225.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D8LS85_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS85_ECTSI) HSP 1 Score: 463 bits (1192), Expect = 2.480e-155 Identity = 236/375 (62.93%), Postives = 270/375 (72.00%), Query Frame = 1 Query: 157 CSLPGCGELVYRNSETGEVSEFCSMKHVSEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADEVYGG--STTLNHYFG-EVYCALPGCPENALPFMTWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHSGVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKP---VGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYAGGPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVYRQ*ALPLA 1263 C LPGC E + N TG+ SE+CSMKHV EAK REC R ECS +TAFLANTAG Q CSRAC +E G ST LN E C LPGC + ALP TWRSL FC EAHR+L TP FG PS+EPYTT+ ++A SA +L+FLD GHPE+KSLADQFTSKW H+KP V V++V+KIE+ R++R+ H DYKTMVPNVRRRFHGTF+SR C FY GG MCLRPDCGLC+I M GFKI DNVG SPAR R +WL YG+G+YFSSVS KANDFS T K+A DGT VRCMLVADVAAG A VTT+K P +PP Y+SVVGEVG +L DELVVYDPAAA+PTHFVVYR + P A Sbjct: 2 CQLPGCKEPAHFNPNTGKASEYCSMKHVHEAKSRECARSECS------------RTAFLANTAGLQFCSRACVNEALGETTSTVLNQTLDDETNCGLPGCQQKALPGGTWRSLRFCSEAHRILFV--QRTPVPFGQPSAEPYTTQVVVARDNTSALELRFLDEGHPEHKSLADQFTSKWLHSKPKLGVEVLNVVKIEVPREVRERHEDYKTMVPNVRRRFHGTFSSRICRFYVGGSMCLRPDCGLCNICMRGFKIEDNVGHSPARGKRRQWLMYGKGLYFSSVSGKANDFSAETEKLATDGTTVRCMLVADVAAGKAFVTTEKYFPQMERPPLGYNSVVGEVGPHLNYDELVVYDPAAALPTHFVVYRNKSPPPA 362
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D8LS84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS84_ECTSI) HSP 1 Score: 325 bits (832), Expect = 5.240e-103 Identity = 172/315 (54.60%), Postives = 198/315 (62.86%), Query Frame = 1 Query: 319 KTAFLANTAGPQCCSRACADEVYGGS---TTLNHYFGEVYCALPGCPENALPFMTWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHSGVSA-FKLQFLDIGHPEYKSLADQFTSKWQHAKP---VGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYAGGPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVYR 1242 +TAFLANTAG Q CSRACA + G + + + GE YC LP CP+ ALP TWRSL FC EAHR+ A P F S+EPYTT ++AH S+ KL FLD GHP +KSLADQFTSKW H+KP V V++VIKIE+ R +R+ H DYKT VPNVRRRFHGTFAS C FY GGP+CLRPDCGLCSI HGF++GDNVG SPAR N+ WL YG+G+YFSSVS KANDFS T KV G +L DELVVYDPAAA+PTHFVVYR Sbjct: 19 RTAFLANTAGRQFCSRACARKAVGKTIWTALIENSGGEAYCRLPDCPQKALPCGTWRSLSFCSEAHRIFFA--QRAPVPFRQWSAEPYTTHVMVAHQTTSSPLKLHFLDEGHPTHKSLADQFTSKWLHSKPKRGVEVLNVIKIEVPRDVRERHEDYKTAVPNVRRRFHGTFASSSCQFYVGGPICLRPDCGLCSICTHGFELGDNVGESPARGNKIHWLMYGKGLYFSSVSGKANDFSAETEKV---------------------------------------------GPHLNYDELVVYDPAAALPTHFVVYR 286
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 260 bits (664), Expect = 6.680e-76 Identity = 168/422 (39.81%), Postives = 212/422 (50.24%), Query Frame = 1 Query: 22 CRLWGCPEPRLVDQNALH--DFCCRGHAQLAKARGEWPRPASKGS-----STCSLPGCGELVYRNSETGEVSEFCSMKHVSEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADEVYGGSTTLNHYFGEVYCALPGCPENAL-PFMTWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHSGVSA---FKLQFLDIGHPEYKSLADQFTSKWQHAKPVGVVDVIKI---EMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYAG--GPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVY 1239 C+L GC P D H A G+W R S G+ STC LPGC V+ + T S++CS H ++A RECLR C+S TA+LAN GPQ CS CA + G + C L GC E AL T +L +C E HRV +T G T E + H G + FKL L HP Y SL DQF +KW +PVG + V KI E+ +R Y+ V NVRRRFHGT S +C+F+ G C C +CSI HGF + NVG + R N L+YG G+YFSSVS KAND+++ + K ++G +RCM VA+VAAG A T + + PP Y SVVGEVG L DELVVY AA+PTH +VY Sbjct: 58 CKLDGCSLPVYFDSAKKHVXXXXXXXXXXXXXADGQWTRSTSAGNTNAGGSTCKLPGCHLGVFIDPATSLESDYCSKSHRAQANTRECLRKGCTS------------TAWLANIEGPQYCSSRCAIDDGGQKAGSSRS-----CKLAGCSEVALYHHQTGNALDYCGEDHRVRNE--QQTLGTNGD------TYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFG--LRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQQNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVY 452
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 254 bits (648), Expect = 1.220e-73 Identity = 173/464 (37.28%), Postives = 224/464 (48.28%), Query Frame = 1 Query: 19 TCRLWGCPEPRLVDQNALHDFCCRGHAQLAKARG---EWPRPASKGSSTCSLPGCGELVYRNSETGEV-----------------------------------------------SEFCSMKHVSEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADEVYGGSTTLNHYFGEVYCALPGCPENALPFM-TWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHSGVSAFKLQFLDIGHPEYKSLADQFTSKW---QHAKPVGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYAG---GPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVY 1239 +C + C PR +H+FC R HA A +RG + RP + C L GC + VY +S+TG V H + R C R C+S TA+LANT Q CS C + LN + G V C L C L + T L +C E HR+L + PS SSEPY + G F L LD HPE SL QF++KW Q A+ + VV + ++E+ ++RD H+ Y V N+RRRFHGT S C+F P LR C LC+I M GFK+ +NVG + +N + L+YG+G+YFSSVS KAND+++LTAK A DGT +RCM VA+VAAG A T +K + D PPP Y SVVGEVG L DELVVY AA+PTH +VY Sbjct: 9 SCDIPECTRPRHQRAGIVHNFCGRTHAMEAVSRGLAAKLDRPHGR-CHVCQLRGCSKPVYFDSDTGRVYXXXXXXXXXXXMDRGDWIPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHYLTGQARLCARRGCTS------------TAWLANTDSRQYCSAYCFSKE---RLVLNKHAGSV-CKLRYCSVGTLHHLQTGEDLGYCSEGHRLLS----KPPSKGQLRSSEPYV--HGVYSVGTPRFNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLR-SCSLCNISMRGFKLDENVGRTALARNFN--LRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALDDGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVY 446
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 249 bits (636), Expect = 1.400e-71 Identity = 158/437 (36.16%), Postives = 218/437 (49.89%), Query Frame = 1 Query: 10 DETTCRLWGCPEPRLVDQNA--LHDFCCRGHAQLAKARGEWPRPA------------SKGSSTCSLPGCGELVYRNSETGEVSEFCSMKHV---SEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADEVYGGSTTLNHYFGEVYCALPGCPE-NALPFMTWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHS-GVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKP-----VGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYA---GGPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVY 1239 D + C+L GC VD+ + +H+FC RGHA A A G+ P+ KG+ CSL GC ELVYR+ T S++CS +H + EC+R CS R + T + + G +C G +N+ G C+LPGC N + + +CCE HR+ T G P+ EP+ + + F+L L HPEY S QF KW+ KP V V+ + K+++ + IR V NV+RRFHGT S C+F+ GGP C C +C+I HGF++ DNVG + R N L+YG G+YFSSVS KAND++EL+ K G VRCM ++ V G A +T + +P PPP + SVVGE G L E+VVY AA+PTH +VY Sbjct: 62 DGSRCKLAGCSRTVYVDERSGRVHEFCGRGHANEAMANGKRSSPSRGTGAGKGAPAHEKGTGECSLEGCKELVYRDPVTKVDSKYCSNRHYVAGTAMLNSECIRDGCS-----RAAWVDEGTGGVLDYCGSRCA----------GEVGMNYLVGVGVCSLPGCVNPNFVHPRDRQETGYCCEDHRLRA-----TQRSLG-PNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWE--KPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGP-CGESTCKVCNICTHGFQLRDNVGDTARRTNFD--LRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQCPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVY 472
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D7FMJ6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ6_ECTSI) HSP 1 Score: 197 bits (502), Expect = 2.070e-51 Identity = 133/389 (34.19%), Postives = 185/389 (47.56%), Query Frame = 1 Query: 106 AKARGEWPRPASKGSSTCSLPGCGELVYRNSETGEVSEFCSMKHVSEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADEVYGG--------STTLNHYFGEVYCALPGCPENALPFMTWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHSGVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKPVGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYAGGPM--CLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVYR 1242 + A G RP++ S C L GC +L N+ TGE +FCS +H +AK P + AFLA C CA G + Y C L GC ++A W F + ++ C G H + +E+ SG S F+LQ LD H +Y+S+ QFTSKWQ V ++ I+M + D + YK V N RRRFHGT + +C F+ G C C C+I M GFK+ VG + + + +YGRG+YFSSVS K+ND+++ ++ +G R M + +VA G A VT D+PD P + SVVG G NL DE VVYD AAA+P++ +VYR Sbjct: 240 SSASGRLTRPSAVSSGQCQLDGCAKLSAINTSTGERYDFCSRQHAQQAKNSGKAGP------------FNGGGAFLAVPGPAVCMLLGCAKPQAPGYDHCCKDHALAARKYIP--MCTLRGCAKDA-----W----FDPKRNQYSSYC------GRAHRNEGERVLQEMTGGSGGSGFRLQELDRSHQKYESVKTQFTSKWQKGNVPTVENIFLIKMPMGVVDKYLAYKNRVGNERRRFHGTSRASDCDFFTGSKKQPCSSRTCVACNICMVGFKL---VGTT-----KKSYARYGRGLYFSSVSGKSNDYAD-GSEQRRNGARYRTMFLCNVAVGKAKVTEAVDLPDDQCPGKGFDSVVGNKGANLNHDETVVYDEAAAIPSYMIVYR 590
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.380e-41 Identity = 91/220 (41.36%), Postives = 121/220 (55.00%), Query Frame = 1 Query: 601 GVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKP---VGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYA----GGPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVY 1239 G S LQ L+ EY +L F ++W +P V + V I++ R++R+ H YK M N+ +RFHGT + C+F G C + C +C+I GFK+G NV AR L+YG GIY +SVS KAND++ +AK + +RCM VA VA G A T +P PPP Y SVVGEVG L DE VVY+ AA+PTH +VY Sbjct: 11 GSSESVLQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVA-GTARATGVP-LRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRLPANQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVY 228
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.230e-41 Identity = 109/356 (30.62%), Postives = 159/356 (44.66%), Query Frame = 1 Query: 10 DETTCRLWGCPEPRLVDQ--NALHDFCCRGHAQLAKARGEWPRPASKGSSTCSLPGCGELVYRNSETGEVSEFCSMKHV-------SEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADEVYGGSTTLNHYFGEVYCALPGCPE-NALPFMTWRSLHFCCEAHRVLQACHHETPSGFGHPSSEPYTTKEILAHSGVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKPV---GVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYA---GGPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKV 1029 D C+L GC D+ N +HDFCCR HA +A+ARG+WPRP +GSS ++ E L C ++ +RP+ ++ G +C A +H+ G++ C+LPGC + L T + +C + HR+ + T + H FKL L H + SL +QF K+Q KP+ V + K+++ +R H ++ N RRRFHGT S C F+ GGP C RPDC +CSI HGF++ + G + R N L+YG G+YFSSVS KAND++ + KV Sbjct: 19 DFQVCQLHGCNAEIFFDEDTNTVHDFCCRRHANMARARGQWPRPGMQGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPAAEEPL-TVCQNVRCQRPAWMDIRSGDQLAFCGSRCAYTCGA----------HHFVGQMKCSLPGCNDFTMLHDRTMDDMGYCRDYHRIKAEERNLTQNPEAH-------VDRTFRGGPSDDFKLSVLTKSHQAHSSLKEQFLVKFQ--KPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGP-CGRPDCNVCSICTHGFRLRGSAGRTAQRTNMK--LRYGEGLYFSSVSGKANDYAAQSEKV 351
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI) HSP 1 Score: 168 bits (425), Expect = 1.800e-40 Identity = 97/223 (43.50%), Postives = 130/223 (58.30%), Query Frame = 1 Query: 601 GVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKP---VGVVDVIKIEMDRQIRDMHNDYKTMVP-NVRRRFHGTFASRECSFYAGGPMCLRP----DCGLCSIIMHGFKIGDNVGCSPARKNRSKW--LKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVY 1239 G S+ L+ LD EY++L D F ++W +P V +V + I++ ++ D H YK MV N+R+RFHGT + C+F P C +C+I M GFK+G NV AR R+ L+YG GIYFSSVS KAND++ L+AK +DG +RCM VA+VA G A T +P + PP SVVGEVG L DE+VVY AA+PTH +VY Sbjct: 456 GSSSSTLRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVRIFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNV----ARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSECPPSGCQSVVGEVGHALNYDEVVVYKEEAALPTHLIVY 674
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 162 bits (409), Expect = 6.590e-40 Identity = 94/229 (41.05%), Postives = 128/229 (55.90%), Query Frame = 1 Query: 574 TTKEILAHSGVSAFKLQFLDIGHPEYKSLADQFTSKWQHAKP---VGVVDVIKIEMDRQIRDMHNDYKTMVPNVRRRFHGTFASRECSFYA----GGPMCLRPDCGLCSIIMHGFKIGDNVGCSPARKNRSKWLKYGRGIYFSSVSSKANDFSELTAKVAADGTWVRCMLVADVAAGNALVTTDKDVPDTWKPPPQYHSVVGEVGLNLKSDELVVYDPAAAVPTHFVVY 1239 T++ +L+ G S LQ L+ E K+L D F ++W +P V +V + I++ R++R+ H YK N+ +RFHGT + C+F G C C +C+I GF++G NV AR R L+YG GIY +SVS KAND++ +AK + +RCM VA VA GN TT +P PPP YHSVVGE G L DE VVY AA+PTH +VY Sbjct: 200 TSRGVLS-VGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVA-RTARATRFP-LRYGAGIYLTSVSGKANDYASRSAKKVGE-LELRCMFVASVALGNTFKTTSARLPADQCPPPGYHSVVGEAGQRLNFDEFVVYKEEAALPTHLIVY 424 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7351.16225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7351.16225.1 >prot_L-elsbetiae_contig7351.16225.1 ID=prot_L-elsbetiae_contig7351.16225.1|Name=mRNA_L-elsbetiae_contig7351.16225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=340bp MKHVSEAKRRECLRPECSSIFPRRPSGYTRKTAFLANTAGPQCCSRACADback to top mRNA from alignment at L-elsbetiae_contig7351:1430..7850- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7351.16225.1 ID=mRNA_L-elsbetiae_contig7351.16225.1|Name=mRNA_L-elsbetiae_contig7351.16225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6421bp|location=Sequence derived from alignment at L-elsbetiae_contig7351:1430..7850- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7351:1430..7850- >mRNA_L-elsbetiae_contig7351.16225.1 ID=mRNA_L-elsbetiae_contig7351.16225.1|Name=mRNA_L-elsbetiae_contig7351.16225.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2040bp|location=Sequence derived from alignment at L-elsbetiae_contig7351:1430..7850- (Laminarionema elsbetiae ELsaHSoW15)back to top |