mRNA_L-elsbetiae_contig7295.16164.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7295.16164.1
Unique NamemRNA_L-elsbetiae_contig7295.16164.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: D7FK47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK47_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 4.190e-53
Identity = 103/194 (53.09%), Postives = 126/194 (64.95%), Query Frame = 1 
Query:  160 GYQRTNNWFELSDALEVFDKYLANLIVSAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEH--IDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNFPGVKRATTPVLEALEGEDCCLEVLHDE 735
            GY RT   FE + +  +F  +L  ++ +A +RP  VLE GS+EGGSA WVAEHLL H +S LVCLD W  G     +ME+   D    E RF  NM +APN ERV A KGDSL SL+GL+A+G TS+FDV+YVD SH M   L DA+LSFRLLKVGG +IFDD     GV RAT+   EAL      L+VLH +
Sbjct:   30 GYNRTGYMFEATGSKNIFQTFLGEMMEAAEERPFFVLESGSWEGGSASWVAEHLLKHSESLLVCLDTWDGG----QEMENTGFDMVSVEERFHWNMGKAPNGERVVAFKGDSLESLAGLVASGLTSSFDVVYVDASHEMKDTLGDALLSFRLLKVGGVMIFDDFW-MKGVARATSAFEEALWDS---LQVLHKD 215
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: D7FK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK29_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 3.080e-47
Identity = 96/210 (45.71%), Postives = 130/210 (61.90%), Query Frame = 1 
Query:  208 VFDKYLANLIVSAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEHIDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNFPGVKRATTPVLEALEGEDCCLEVLH-DEALMVARKTAEDPWITPASVMTMGKSEESSLLSS 834
            VF ++   +   A ++P +VLE GS++G SA W+AEH+L HP+S LVCLD W+   P   +    + +  E RFR+NMAR PN +RV A KG SL SL+ ++A+G  S FD +++DGSH M +VL DA+LSFR+LKVGG +IFDD     GV  AT    EAL      LEVLH DE  +V  K A + + T  S + +G S     L+S
Sbjct:   70 VFQRFFGGMAGLAEEQPFHVLETGSWQGESASWIAEHILKHPESILVCLDTWNGSPP--PENSGYEMAAIEDRFRSNMARVPNGDRVVAFKGTSLESLANILASGLDSRFDAVFLDGSHEMKNVLRDALLSFRMLKVGGVMIFDDYW-MRGVAHATAAFEEALGDY---LEVLHRDETHLVVTKAANERFSTHGSELLLGDSSRLQKLTS 273
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A6H5JQS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS8_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 3.210e-46
Identity = 95/198 (47.98%), Postives = 124/198 (62.63%), Query Frame = 1 
Query:  244 AADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEHIDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNFPGVKRATTPVLEALEGEDCCLEVLH-DEALMVARKTAEDPWITPASVMTMGKSEESSLLSS 834
            A ++P +VLE GS++G SA W+AEH+L HP+S LVCLD W+   P   +    D +  E RFR+NMAR PN +RV A KG SL SL+ ++A+G  S FD + +DGSH M+ VL DA+LSFR+LKVGG +IFDD     GV +AT    EAL      LEVLH DE  +V  K A   + T  S + +G S     L+S
Sbjct:    5 AEEQPFHVLETGSWQGESASWIAEHVLKHPESILVCLDKWNGSPP--PENSGYDMAAIEDRFRSNMARIPNGDRVVAFKGSSLESLANILASGLDSRFDAVLLDGSHEMNDVLGDALLSFRMLKVGGVMIFDDYW-MRGVAQATAAFEEALGDY---LEVLHSDETHLVVSKAANKRFATHGSELLLGDSSRLQKLTS 196
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A7S4KFR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KFR5_9EUKA)

HSP 1 Score: 127 bits (320), Expect = 1.790e-32
Identity = 70/147 (47.62%), Postives = 89/147 (60.54%), Query Frame = 1 
Query:  241 SAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWST------GGPFLDQMEHIDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAGGTS-------TFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDD 642
            S A  PV +LE+G+FEG + +W+AEHLL H DS L+C+DLWST      G P     E  ++ G   RF  N+AR PN  RV   +G +L +L G+IAA            FD+IYVD  HS   VLADA L+FRLL+VGG + FDD
Sbjct:    4 SPAAMPVRILELGAFEGSTTMWLAEHLLRHKDSWLLCVDLWSTASLAAVGQPIAGTPELANTLG---RFSANVARTPNGGRVRTFRGSTLAALGGMIAAAADGDQAAEGDAFDLIYVDAGHSASDVLADAALAFRLLRVGGLVFFDD 147
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A3L7QJ61_9BACT (Class I SAM-dependent methyltransferase n=2 Tax=Bacteria TaxID=2 RepID=A0A3L7QJ61_9BACT)

HSP 1 Score: 116 bits (290), Expect = 3.060e-28
Identity = 75/171 (43.86%), Postives = 98/171 (57.31%), Query Frame = 1 
Query:  253 RPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEHIDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNFPG-VKRATTPVLEA--LEGEDCCLEVLHDEALMVARK 756
            RPV  LEIGS EG SA+W+A+HLL HP + L+C+D W        + EH        RF  N+A      +V  +K DS     GL++ G    FD+IY+DGSH    VL DAIL+FR+LK  G LIFDD  N PG V++   P ++A  L   D  L VLH +A ++ RK
Sbjct:   25 RPVRCLEIGSHEGRSAVWIAQHLLSHPSATLICIDPWPDA-----EAEH--------RFDANIAETGRAPQVRKLKTDSW---RGLLSQG--PGFDLIYIDGSHEGRQVLEDAILAFRVLKRSGLLIFDDYENVPGDVRQPPEPAIDAFLLLWSDQ-LTVLHQDAQVIVRK 176
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: UPI000976EDBE (class I SAM-dependent methyltransferase n=1 Tax=Bradyrhizobium mercantei TaxID=1904807 RepID=UPI000976EDBE)

HSP 1 Score: 110 bits (275), Expect = 1.100e-25
Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 1 
Query:  172 TNNWFELSDALEVFDKYLANLIVSAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEHIDSSGSEGRFRNNMA----RAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMM 648
            TNNWF+++  L V+D+ +  +      RP  +LEIGS+EG SA ++ +        ++ C+D W  G     + + ++ S  E RF+NN+A    RA +  ++ A KG S   L+ LI  G    FD+IY+DGSH    VLADA+LSF LLKVGG ++FDD +
Sbjct:    9 TNNWFDVTARL-VWDQLIPQI------RPERILEIGSYEGASACYLIDACASQRPIEIQCIDTWEGGSEH--KADGVNMSAVEIRFQNNVADAAKRAQHPVKLIARKGRSTDQLAKLIGEGFKQYFDMIYIDGSHEAPDVLADAVLSFELLKVGGHMVFDDYL 162
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A7S2V1H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1H4_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.690e-25
Identity = 62/173 (35.84%), Postives = 98/173 (56.65%), Query Frame = 1 
Query:  256 PVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEHIDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNFPGV---KRATTPVLEALEGEDCCLEVLHDEALMVARKTAE 765
            P+++LEIG  EGGSA +   ++L H +S   C+D W+     +     + +   + R+  N    PN E++  ++GDSL  L+ L+  G    +DVIYVDG H +  VLAD++LSFRLLK+GG +IFDD +    +   +RA   +   L G    +EVL+    +V +K ++
Sbjct:    3 PIHILEIGCHEGGSASFYQRYMLHHQESTYTCIDPWAIRPNDMT----LPADSFKTRYHQNTCSHPNKEKIRILEGDSLSGLAQLV--GENKKYDVIYVDGGHEVSEVLADSVLSFRLLKIGGLMIFDDYLQNLDLGEDQRAKAGIDAFLLGFQSNIEVLYTFYQVVIKKLSD 169
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A1G5IZ77_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Microvirga guangxiensis TaxID=549386 RepID=A0A1G5IZ77_9HYPH)

HSP 1 Score: 109 bits (272), Expect = 3.190e-25
Identity = 74/170 (43.53%), Postives = 96/170 (56.47%), Query Frame = 1 
Query:  172 TNNWFELSDALEVFDKYLANLIVSAADRPVNVLEIGSFEGGSALWVAEHLL-LHPDSKLVCLDLWSTGGPFLDQME----HIDSSGSEGRFRNN---MAR-APNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNF 654
            TN WFE   A  V+D+ +         +P  +LEIGS+EG SA ++ + L  LHP  +L C+D W  G   ++  E      D S  E RF  N   MA  APN   +   KG S   L+ ++A+G  S+FD++YVDGSH    VL DAILSFRLLK GG LIFDD + F
Sbjct:    7 TNTWFE-DTARPVWDQLIPQF------QPRKILEIGSYEGASAYYLVQKLAPLHP-LELHCIDTWEGG---IEHQEGGGAETDMSAVEARFLKNARTMAESAPNPVELVVHKGFSHAQLAKILASGHESSFDMVYVDGSHQAPDVLCDAILSFRLLKTGGLLIFDDYLWF 165
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BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A1H0YHQ6_9BURK (Methyltransferase domain-containing protein n=2 Tax=Paraburkholderia fungorum TaxID=134537 RepID=A0A1H0YHQ6_9BURK)

HSP 1 Score: 109 bits (272), Expect = 4.170e-25
Identity = 72/177 (40.68%), Postives = 94/177 (53.11%), Query Frame = 1 
Query:  151 IKHGYQRTNNWFELSDALEVFDKYLANLIVSAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEH-------IDSSGSEGRFRNNMA----RAPNNERVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMM 648
            I   YQ TNNWFE + A  V+D+ +  L       P  +LEIGS+EG SA ++ + L      +L C+D W  G      +EH        D +  E RF +N+A    R P    +   KG S   L+GLIAAG    FD +YVDGSH    VL DA+L FRLL+VGG + FDD +
Sbjct:   11 IMTSYQFTNNWFE-TVARGVWDQLMPQL------APARILEIGSYEGASACYLIDALAPRHPLELHCIDTWEGG------VEHQPGGDAPADMNSVERRFHHNVALAAARYPGRATIEVHKGFSDDCLAGLIAAGKKGYFDFVYVDGSHQAADVLVDAVLGFRLLRVGGVIAFDDYL 174
[Close]
BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Match: A0A1N7S5H4_9BURK (Uncharacterized protein n=2 Tax=Paraburkholderia ribeironis TaxID=1247936 RepID=A0A1N7S5H4_9BURK)

HSP 1 Score: 107 bits (268), Expect = 1.600e-24
Identity = 73/196 (37.24%), Postives = 103/196 (52.55%), Query Frame = 1 
Query:  163 YQRTNNWFELSDALEVFDKYLANLIVSAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTGGPFLDQMEHI---DSSGSEGRFRNNMARAPNNE----RVTAIKGDSLLSLSGLIAAGGTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMM---NFPGVK---RATTPVLEALEGEDC 711
            YQ TNNWF+ + A  ++D+++A         P  +LEIGS+EG SA ++ + L  H   +L C+D W  G     Q E +   D +  E RF +N+ ++        +V   KG S   L+ LIA G    FD +YVDGSH    VLADA+L F+LLKVGG + FDD +     P  K   R   P ++A    +C
Sbjct:   15 YQFTNNWFD-TVAKGLWDQFMARY------APARILEIGSYEGASACYLIDTLAPHHPVELHCIDSWEGG--LEHQAEGVSPADMAAVESRFHHNVTQSAGQHAGRAKVVVHKGYSDECLARLIAEGKKGYFDFVYVDGSHQAADVLADAVLGFKLLKVGGVIAFDDYLWSEQLPTGKDPLRCPKPAIDAFVNLNC 201
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7295.16164.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK47_ECTSI4.190e-5353.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK29_ECTSI3.080e-4745.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQS8_9PHAE3.210e-4647.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4KFR5_9EUKA1.790e-3247.62Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A3L7QJ61_9BACT3.060e-2843.86Class I SAM-dependent methyltransferase n=2 Tax=Ba... [more]
UPI000976EDBE1.100e-2539.88class I SAM-dependent methyltransferase n=1 Tax=Br... [more]
A0A7S2V1H4_9STRA1.690e-2535.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1G5IZ77_9HYPH3.190e-2543.53Methyltransferase domain-containing protein n=1 Ta... [more]
A0A1H0YHQ6_9BURK4.170e-2540.68Methyltransferase domain-containing protein n=2 Ta... [more]
A0A1N7S5H4_9BURK1.600e-2437.24Uncharacterized protein n=2 Tax=Paraburkholderia r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7295contigL-elsbetiae_contig7295:3661..9335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.3
Seed ortholog evalue1.4e-43
Seed eggNOG ortholog2880.D7FK47
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2DZ7R@1,2S6WK@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size875
Cds size798
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.3928862-UTR-L-elsbetiae_contig7295:3660..37201622816812.3928862-UTR-L-elsbetiae_contig7295:3660..3720Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7295 3661..3720 +
1691683832.2358184-UTR-L-elsbetiae_contig7295:3660..37201691683832.2358184-UTR-L-elsbetiae_contig7295:3660..3720Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7295 3661..3720 +
1622816812.4043462-UTR-L-elsbetiae_contig7295:4111..41231622816812.4043462-UTR-L-elsbetiae_contig7295:4111..4123Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7295 4112..4123 +
1691683832.248382-UTR-L-elsbetiae_contig7295:4111..41231691683832.248382-UTR-L-elsbetiae_contig7295:4111..4123Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7295 4112..4123 +
1622816812.48898-UTR-L-elsbetiae_contig7295:9330..93351622816812.48898-UTR-L-elsbetiae_contig7295:9330..9335Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7295 9331..9335 +
1691683832.3207114-UTR-L-elsbetiae_contig7295:9330..93351691683832.3207114-UTR-L-elsbetiae_contig7295:9330..9335Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7295 9331..9335 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.4180927-CDS-L-elsbetiae_contig7295:4123..42071622816812.4180927-CDS-L-elsbetiae_contig7295:4123..4207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 4124..4207 +
1691683832.2635524-CDS-L-elsbetiae_contig7295:4123..42071691683832.2635524-CDS-L-elsbetiae_contig7295:4123..4207Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 4124..4207 +
1622816812.4309514-CDS-L-elsbetiae_contig7295:5146..52631622816812.4309514-CDS-L-elsbetiae_contig7295:5146..5263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 5147..5263 +
1691683832.2736652-CDS-L-elsbetiae_contig7295:5146..52631691683832.2736652-CDS-L-elsbetiae_contig7295:5146..5263Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 5147..5263 +
1622816812.441246-CDS-L-elsbetiae_contig7295:5624..57711622816812.441246-CDS-L-elsbetiae_contig7295:5624..5771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 5625..5771 +
1691683832.282345-CDS-L-elsbetiae_contig7295:5624..57711691683832.282345-CDS-L-elsbetiae_contig7295:5624..5771Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 5625..5771 +
1622816812.4516978-CDS-L-elsbetiae_contig7295:6821..69681622816812.4516978-CDS-L-elsbetiae_contig7295:6821..6968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 6822..6968 +
1691683832.2912765-CDS-L-elsbetiae_contig7295:6821..69681691683832.2912765-CDS-L-elsbetiae_contig7295:6821..6968Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 6822..6968 +
1622816812.46453-CDS-L-elsbetiae_contig7295:8491..86591622816812.46453-CDS-L-elsbetiae_contig7295:8491..8659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 8492..8659 +
1691683832.3002074-CDS-L-elsbetiae_contig7295:8491..86591691683832.3002074-CDS-L-elsbetiae_contig7295:8491..8659Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 8492..8659 +
1622816812.4771907-CDS-L-elsbetiae_contig7295:9195..93301622816812.4771907-CDS-L-elsbetiae_contig7295:9195..9330Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 9196..9330 +
1691683832.309891-CDS-L-elsbetiae_contig7295:9195..93301691683832.309891-CDS-L-elsbetiae_contig7295:9195..9330Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7295 9196..9330 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7295.16164.1prot_L-elsbetiae_contig7295.16164.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7295 4124..9330 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7295.16164.1

>prot_L-elsbetiae_contig7295.16164.1 ID=prot_L-elsbetiae_contig7295.16164.1|Name=mRNA_L-elsbetiae_contig7295.16164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=266bp
MRHICEEGGESHPTAHASYFASKFIAIKHGYQRTNNWFELSDALEVFDKY
LANLIVSAADRPVNVLEIGSFEGGSALWVAEHLLLHPDSKLVCLDLWSTG
GPFLDQMEHIDSSGSEGRFRNNMARAPNNERVTAIKGDSLLSLSGLIAAG
GTSTFDVIYVDGSHSMDHVLADAILSFRLLKVGGFLIFDDMMNFPGVKRA
TTPVLEALEGEDCCLEVLHDEALMVARKTAEDPWITPASVMTMGKSEESS
LLSSVAALLTTGYTV*
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mRNA from alignment at L-elsbetiae_contig7295:3661..9335+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7295.16164.1 ID=mRNA_L-elsbetiae_contig7295.16164.1|Name=mRNA_L-elsbetiae_contig7295.16164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5675bp|location=Sequence derived from alignment at L-elsbetiae_contig7295:3661..9335+ (Laminarionema elsbetiae ELsaHSoW15)
CTTGAACTCGAACAAGGGGATTGGAGCGTAGTTATTGAAAACGATACTTC
TGATGCCGAGGTAAGCCGTTTGTATGCTGGATGTAGCTCTACAATATTGG
ATATCTAAAGGGAGTCTATCTAGACTAGACTATATAGTCTAGATGTCTAG
TCTAGAGGCATAGATGATCCTACTAGTATAGTTTAATCGTCTACAGAAGA
CTGCGTGCTGTTGTATCTATTAATGTACCTGGAGTGCATGAATGCCATAG
AAAGGGCAACGATGAGTGCTACATAACACTTCGCCGACAATATCCTGGCG
TAGCGCTTTAGATCGGGAAGATTCTCCTACCGGATCGAAATAATGCCATC
CCGTAGCTATGTACGCACCTACTTCATCCGCCCGCAGGAAAACATTTACC
AGGTACTTACTTCCTTCCACTTGTGCGCTTTTTCTGCCCAACGAGATTCA
GATTCGGGCCCTGATGCGTCACATCTGCGAAGAAGGCGGCGAGAGTCACC
CGACAGCGCACGCCAGTTATTTTGCTTCCAAGTTCATTGCAATAAAGGTG
AACACGAAACACCATCTATGAACTTCGTTGCGAAGGCTTGCCGCCACGCT
ATTAAATAGCAGCCTATTTAATTACTCTCAACTAAAAGTATATAGACTTT
GACATCTATCTCCCGGCAATCGAACACCAGCGGAGAAACATTTCGAGTTG
AAATCGTTCTGTGTTTGTTTATGGTGTGCCCAAATATCTCGAAGTTCCTT
CCTAAATAGTGCGTTGCGGTGCCTAGATTTTTGGATGAGATGTGCGCACA
TAATCATCATGTGTGTGTGCGCGCGCTGGACAAACCGCGCGCGCCAGTAA
AGATATCATCACCTCAACATGATACCCCTATTTCTAAAATTCTAAAGGCC
CCCTCGAAATATAGACTATCCTTTGATGGTCCACGGCGGGATCTAAATAG
CAGTATTTCGTGGTGCTAATTTTCTATTTGGTACGGTAGTTGATGTACCA
ACGGTGCGGGAGGACCGACCGAGATGCCAATAATTCCCCAAGGCCCGGCG
TAAGTTTTGTACCGCAGGTATCATCATCTTGCGTAACCCCCGGGAGAGCA
TGAACCGATCTCCCGGAACGAGGAACCTTGTGTATATCTTCTATGTTTGC
GGGCCAGACACCGACGGTTCGTTGCTGAACAAAAGCATGGGGTTCGCTGT
TGCGCGAGAAAACGCGCATCAACGTTTTTTTGTCTTTGTGGAGAACGTGG
CCTTGCGCGAACAAGCAAAGAAAGCCAAATCTCAGTTTTCGGCTTGAGTG
CCCACGTCTTGGCGCAGGTTTGTGTTGAATTGTGGAAAATCGCCGCCCAG
AACGCGTTGGCGCACATTTTTTCCCTGGCAAGACTAACCGCATGCCTCCC
CTGGATGGCGCCATCGAGCATGTATCCTCTGCTAATAATGCGGACATTGT
GCTCCTGCTATTGATCACACGCCCTACTGCACCCAGCATGGATACCAGCG
CACAAACAATTGGTTCGAGTTGAGCGATGCATTGGAGGTATTCGACAAGT
ACTTGGCAAACTTGATCGTGTCAGCGGCCGATCGTCCTGTCAACGTTCTC
GAGGTGCGTGGAAGAAACACATATGAGCGCCCGCCTGTACATTGCTGCTG
GGACTTGCTGATTTGTCTGTACCGCAAAGGTTAGATTGTGTACTAACCTC
TAACCATGATGAGAAACAAAGAGAGCGTTGCTCAAGCACGAGAGCTGTAG
TCTAGCATATAGCGGCATGGTTTTCTCGGGCGGTTCCCGGTGACGAGAAA
TGCACGGCCGCTGACCGTCGCGCCAAGAGGTAGTTCACAGCTCTGCTATA
TTTCAAAGTTTTACAGATGATCATCCGAATCTATTTCAGCATCAAATTCG
CCTTTCTGATTCCCGCCCGCGCACGCTGCGGCTGAAATTATGCCTACTTT
GTATATGTAAGCAGATCGGGAGCTTCGAAGGGGGGTCTGCCCTGTGGGTG
GCCGAACATCTACTGCTACACCCGGACTCCAAGCTCGTCTGCTTAGACTT
GTGGAGCACGGGAGGCCCATTCTTGGATCAGATGGAACACATCGATAGTT
CAGGAAGTGAGGTGGGAGATGACGCGACCGATTGTGAAGCCAGGCTTCCT
CTACCGTTGTTGAGTAGTGTTTATGCGCAGAAAGGGAGACTATGGGGCTG
TTAGCAGAGAGGGGAGGGGAGGCTCATCATATCAAGCGGAGACACAGTGC
GCTTTCATCGGCCATGCATACCCGGGACGGAGAACGACAGGTTGTCTCAC
AATCAAGCCTGCATTGCACGTATGTAATGTGGTATCTATGTAGTAGCAAA
AGTACAGAGCGACGTGAGATGTTCGGTGGCCGTCGTGCAAGGAAGGCTGC
ATACTTCAAAAAGGCATGGGGGTGGTCATGTCAAAGTCATTGGCAGTAGG
CAAGCTTTTGCTTGGTCGAAGATCCTCGGTCGATCGGTCCTGCCATCTGT
GGTCAGAACGTCCCTGCCCATGAGTGCCCACTTGGCCTCGGCATGTATGT
ATGCGCGCAGACGCCGCTGTCTGCATTTCTCGTCCAAGGTTTCAGTACAG
ATTAAGACTGGGATGGTCTAACAGTTTTGTGCAATTGGTTCAGATTAATA
AACGCTGGTGAAGCCGCCAAAGGAACCTTCGCTGCAATGTTCACATCTTT
GTTCACTGGGTCGGTCACCGGTGTAAGCAGTTTATATAATATAAGTAAAT
GACATCCCCACATGCGCGATGAACACTATAAGAAGAGGCGTGTATTTTGT
AACTTCAAGACCCAAAGTCAGCACTACGTAAGAAAACAAGGAATCAAAAT
CAAGCCCAGCATACCCGGCAGACGAAGAGGCGGGGTCATAATCAACCGAG
CACATCGCAGCATTGAATATTTAGGGCCTTCATTGTAGTGTCCCAAACAA
GTCGCCCCTTTTGCTCTCTCCTTTGAATAAATGTACCGATTTTCGAGTCA
TAAATGCTCGTTTCCGAAAGCTGGCAAGGACTCTTCGATGGTTGAACTTG
CACCGCTCGGACTGCAGGGCACGCGAGATTGGGTAGGATACAAAAAGGCG
TAGTCGCTAAGCATGCATGCAGTCACGGCTCGCCACGCCCTTCACCCATC
GCTGTTCTCAGGGTCGCTTCCGAAACAACATGGCCAGAGCTCCGAACAAC
GAGCGAGTGACCGCGATAAAGGGCGACTCTCTGCTGTCGCTGAGCGGTCT
CATAGCGGCAGGAGGAACGTCGACATTCGACGTCATCTACGTCGACGGTA
GCCATTCGGTGCGTACTATTTATACGTGTTTTTTTTTTCTTCTTCACATT
GATTTCCAGTGCTCGATGGGCTCCTTGTCACGAGGGCATCTTGCCAGAGT
ACCGAACCGTGGTCACACAGAAGGTTTCCTTTCCCCGAGGCCCTCACTCC
CCCCCTTCTGCGGTGCTTGCCGAAGGTTTTTGTCGCGAAAAGGGTTCAGC
CGTCCCTTTCCCTCGTCGACGGTGAGGTCGACGTTTGTGTACACACGCTA
TGTAAGCGATATCCACTGACAGGGACGGAAGCGAGAGAAAAAACTCACTT
CACAAGAAAAAGTCGCTCCCGCCGGGTTTCGAACCCATGACTTTCCTGCT
AGGAGGTGGTCGGGCATACCAACTAAACCACCGGGGCGACCGGCTCTTCG
TGTAGTACCTTTTGAAGTGGCACAAGCTTCCGCGACGTTTGACGGAAAAT
AAACCATTTTCGAAAAACTCCTCTTTGGAGCAAGTTATGCTAACCCAGCA
AAAAGAGGCTCTCCTCATAGACAATGAATGTGCCTTGTGGTCTCTGCAAA
GAGTCTACAAAGCACGTAGGACCATACACGTATGTGTGGCAGAGGACCTC
CACCCGTGGACTCTGTAAGATAGCTGAACTTTTTGTTGATTACCGGGTAA
TAACATATATAGTCTATACATACGTGGATTGTCTGAGCCGAGAAGTTGGT
GGTCAGAAAGGTATACTTACTCCAGTAGTCGCTGGGCTTGGATGTACTCT
GCTTGGCTTGCGTGTACAGAGAAGTGACGTGCGTGGCGTTCACGCACGCT
AGGGTCCCGGTTTGGTACATGGCTGAAGGGGGATACGACTTTATCGAGTA
TCCCCCTGTAACCACCAACGAACCGTCACACATGCAAGCACCACAACCAT
ATGAACCCGTGCTGTGGAAGTTGCTATGTATGTGCGACGTTGGGCGAGGT
ACCTATCTTTCGAAGCAATCCCGTTGTAAAAGCGAGCAGACCACGCAGCC
CCTAGAACACATGCTAGAGCTGCTCACCAAAACCTCGCCCCATTCTTCAG
GAAGAATAATGCAACTTCACAACTTTACGGCCTGCCTCTTTCCGACTGCG
ATGGGGGGATGATAGTATGTGTGCACACGACTGCATCACGTTTGTCGTGT
CGGGAAGAAGGCGTGCGCGTATGCTCATGTTTGCCATTGTCCCTGGCAAT
GGCCACACCAGAGCACCCACCCGTTTCTTCGGCTATCACCCGAACCTATC
ACCGAGAATGGACAAATAGCACAGCAAGCACGACGCAGTTCCAACCTTCT
AGGACGGTCCACTTCGCGCTTTTGGTCTGTTCCGCCGGAAGCCCGCTCAC
CATTTTTTAAGTACGTATGCAAGGGTTTTGAATGCATTTACAGGGTAAAT
TTCTCATGTAGCAATAGTGCGTGCAGGGTATCCGCCTGACATGACGGATG
ATATTATCCTCCTGCTTCCCTGCCCCCCACTTTTGCTCATGAACGTTTTT
TGAATCGTTCCACGAATATCTATGCATGCAGATGGATCACGTGCTAGCAG
ACGCCATTCTTTCGTTCCGCCTGCTTAAAGTTGGCGGCTTCCTGATATTC
GACGACATGATGAACTTCCCCGGCGTGAAACGGGCAACGACTCCCGTCTT
GGAGGCCCTTGAGGGAGAAGATTGCTGTCTCGAGGTTTTGCACGATGAGG
TGCGAAGCGTGACTTCCATGAGCTCATCTATCTCTGGTCTAACAAATATC
TTGCCGATTTTCGATTTCGCAACCTCTAGATTATCATGTAGCTATGTGTA
CAAGGAGCGCAACCAGGCATGTATTGCCCCCGATTCGTTCGCCGACATTT
TGGCAACTGCCCATCTGGTTGGTGAATCGCTAAATTTAATCGATTTTTTC
GGTCAAGAAAATTGGCGGGGAATTTTATGTATTTGGTGTTGTGAGGAGAT
GAAGAATGCGGATGCGGACATGAGCACAGCAGTTTGGAGTTTCAATGGAA
GGCAGGCTTGTTTGAGGGAGGGGCGGGGGTCGGGAAGAACCGCAACACTT
TTGGGCGCGACGCTGCCCAAAAGACAAACGTGGGTTGGTAGACTATGTTC
GTACAAAAGCTGATTTTTTGCCGTTGATCGTCGACCGCTTCGCGTCGACG
GGCGTGTTGTGACCCCTACAAAGACTAATTTCGGGAATGCTTGCATCGTT
CGTTGTTGTTGTTGCGGTGCAAATGTATGTCACAGGCCCTGATGGTCGCC
AGAAAGACAGCCGAAGACCCCTGGATCACCCCGGCGAGCGTCATGACGAT
GGGGAAGAGTGAGGAAAGTTCCCTGCTGTCGAGCGTCGCGGCCTTACTCA
CCACGGGATACACAGTATAACGTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7295:3661..9335+

>mRNA_L-elsbetiae_contig7295.16164.1 ID=mRNA_L-elsbetiae_contig7295.16164.1|Name=mRNA_L-elsbetiae_contig7295.16164.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1596bp|location=Sequence derived from alignment at L-elsbetiae_contig7295:3661..9335+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGTCACATCTGCGAAGAAGGCGGCGAGAGTCACCCGACAGCGCACGC
CAGTTATTTTGCTTCCAAGTTCATTGCAATAAAGATGCGTCACATCTGCG
AAGAAGGCGGCGAGAGTCACCCGACAGCGCACGCCAGTTATTTTGCTTCC
AAGTTCATTGCAATAAAGCATGGATACCAGCGCACAAACAATTGGTTCGA
GTTGAGCGATGCATTGGAGGTATTCGACAAGTACTTGGCAAACTTGATCG
TGTCAGCGGCCGATCGTCCTGTCAACGTTCTCGAGCATGGATACCAGCGC
ACAAACAATTGGTTCGAGTTGAGCGATGCATTGGAGGTATTCGACAAGTA
CTTGGCAAACTTGATCGTGTCAGCGGCCGATCGTCCTGTCAACGTTCTCG
AGATCGGGAGCTTCGAAGGGGGGTCTGCCCTGTGGGTGGCCGAACATCTA
CTGCTACACCCGGACTCCAAGCTCGTCTGCTTAGACTTGTGGAGCACGGG
AGGCCCATTCTTGGATCAGATGGAACACATCGATAGTTCAGGAAGTGAGA
TCGGGAGCTTCGAAGGGGGGTCTGCCCTGTGGGTGGCCGAACATCTACTG
CTACACCCGGACTCCAAGCTCGTCTGCTTAGACTTGTGGAGCACGGGAGG
CCCATTCTTGGATCAGATGGAACACATCGATAGTTCAGGAAGTGAGGGTC
GCTTCCGAAACAACATGGCCAGAGCTCCGAACAACGAGCGAGTGACCGCG
ATAAAGGGCGACTCTCTGCTGTCGCTGAGCGGTCTCATAGCGGCAGGAGG
AACGTCGACATTCGACGTCATCTACGTCGACGGTAGCCATTCGGGTCGCT
TCCGAAACAACATGGCCAGAGCTCCGAACAACGAGCGAGTGACCGCGATA
AAGGGCGACTCTCTGCTGTCGCTGAGCGGTCTCATAGCGGCAGGAGGAAC
GTCGACATTCGACGTCATCTACGTCGACGGTAGCCATTCGATGGATCACG
TGCTAGCAGACGCCATTCTTTCGTTCCGCCTGCTTAAAGTTGGCGGCTTC
CTGATATTCGACGACATGATGAACTTCCCCGGCGTGAAACGGGCAACGAC
TCCCGTCTTGGAGGCCCTTGAGGGAGAAGATTGCTGTCTCGAGGTTTTGC
ACGATGAGATGGATCACGTGCTAGCAGACGCCATTCTTTCGTTCCGCCTG
CTTAAAGTTGGCGGCTTCCTGATATTCGACGACATGATGAACTTCCCCGG
CGTGAAACGGGCAACGACTCCCGTCTTGGAGGCCCTTGAGGGAGAAGATT
GCTGTCTCGAGGTTTTGCACGATGAGGCCCTGATGGTCGCCAGAAAGACA
GCCGAAGACCCCTGGATCACCCCGGCGAGCGTCATGACGATGGGGAAGAG
TGAGGAAAGTTCCCTGCTGTCGAGCGTCGCGGCCTTACTCACCACGGGAT
ACACAGTATAAGCCCTGATGGTCGCCAGAAAGACAGCCGAAGACCCCTGG
ATCACCCCGGCGAGCGTCATGACGATGGGGAAGAGTGAGGAAAGTTCCCT
GCTGTCGAGCGTCGCGGCCTTACTCACCACGGGATACACAGTATAA
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