mRNA_L-elsbetiae_contig7291.16159.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 241 bits (616), Expect = 3.620e-70 Identity = 118/186 (63.44%), Postives = 142/186 (76.34%), Query Frame = 1 Query: 208 MIAPVEDSTCAMVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVRIDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIILFGDTLDVDDAAADC 765 ++AP + C MVVIIEAEDL +G W +V D ASGG YI WEGL E +NN++ +GD+IST++ IPTAGTYSF+W MRQP GV D+ NDSWL FPDA RFGPAGT+ YGTFVKV+GNAA F+YQG AE++ T+IA+EFA AG Y M+I GRSHGHQIDQI+LFGD+L VDDA A C Sbjct: 722 VVAPTPTNDC-MVVIIEAEDLPVNGDWRIVQDNA-ASGGAYITWEGLSEAQNNSDPADGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPAGTSKSYGTFVKVYGNAADGVFKYQGTAEEENGDHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGDSLKVDDAVAGC 905
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 226 bits (575), Expect = 2.300e-67 Identity = 111/176 (63.07%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 241 MVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVRIDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIILFGDTLDV-DDAAADC 765 MVVIIEAEDL +G W +V D ASGG YI WEGL E +NN + +GD+IST++ IPTAGTYSF+W MRQP GV D+ NDSWL FPDA RFGPA T+ YGTFVKV+GNAA F+YQG AED++ T+IA+EFA AG Y M+I GRSHGHQIDQI+LFG + +DA A C Sbjct: 313 MVVIIEAEDLPVNGDWRIVQDNA-ASGGAYITWEGLSEAQNNRDPGDGDIISTSVQIPTAGTYSFKWAMRQPDGVESDKANDSWLNFPDADRFGPADTSKSYGTFVKVYGNAADGVFKYQGTAEDEDGAHTQIAIEFAAAGEYEMEIGGRSHGHQIDQIVLFGGSFHTAEDAVAGC 487
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 212 bits (540), Expect = 5.040e-60 Identity = 105/179 (58.66%), Postives = 131/179 (73.18%), Query Frame = 1 Query: 223 EDSTCAMVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVRIDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIILFGDTLDVDDAAA 759 E ++ MVV +EAEDL G W VV+D ASGG+YI WEGL E +NN + +GD++S +I +PTAGTYSF+WLMRQP GV D+GND+WL FPDA R+GPAGT + YGTF+KV+G A F Y G ED T+IAVEF EAG Y M+I+GRSHG QIDQI++FG+ L VD+A A Sbjct: 589 EPTSGCMVVRMEAEDLPVLGDWRVVNDAD-ASGGKYITWEGLSEGQNNGDPADGDIMSASIQVPTAGTYSFKWLMRQPDGVESDKGNDAWLNFPDAKRYGPAGTQESYGTFIKVYGRATNGDFEYSGTGEDSHG-HTQIAVEFEEAGEYAMEISGRSHGLQIDQILVFGEDLSVDEAVA 765
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: UPI000832695B (T9SS type A sorting domain-containing protein n=1 Tax=Labilibacter marinus TaxID=1477105 RepID=UPI000832695B) HSP 1 Score: 100 bits (250), Expect = 2.500e-20 Identity = 63/166 (37.95%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 250 IIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVR--------IDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIIL 723 + EAE +E G+W + +D TFASGG+YI ++G + + +V++ + I TAGTY+F+W +RQ R D ND+W++F T VK G + F G AE D + Q EI V F EAGTYT++I GRSHG QID+I++ Sbjct: 482 VFEAERIELKGSWKLGTDETFASGGKYIYFDGANKYQGGPA--PAEVLTYSFKINTAGTYAFRWFVRQSEEERGKVTGQQGTDLANDAWVYFQGDIGLLKGNTLTSP---VKCLGRSD-PGFWLMGNAEQDHE-QGEINVAFPEAGTYTVEIGGRSHGFQIDKIVI 640
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: UPI0002559DEE (Ig-like domain-containing protein n=1 Tax=Ochrovirga pacifica TaxID=1042376 RepID=UPI0002559DEE) HSP 1 Score: 100 bits (249), Expect = 3.530e-20 Identity = 63/176 (35.80%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 223 EDSTCAM-----VVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVR-IDRGNDSWLFFPDATRFGPAGTTDEY--GTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIILF 726 ED TC + +++ EAE E GAW + +D ASGG+YI ++G + IS I GTY+F+W+MRQP G R D GND+W +F D G ++ G F K G + F G E + Q+ + F AG YT+ ++GRSHG Q+D++IL+ Sbjct: 451 EDKTCNVEEVDGLLVFEAERFELKGAWKLGTDAAKASGGKYIYYDGAN---SYGTVNPSHNISYTFKINNPGTYTFKWMMRQPEGERGSDLGNDAWFYFSDDIGKGKDKEKNDIILGQFYKFVGRSDD-NFTLNGAVEVNH-AQSWVRAVFPTAGEYTLNLSGRSHGFQLDRLILY 621
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: A0A150AHK4_9BACT (Por_Secre_tail domain-containing protein n=2 Tax=Flammeovirga sp. SJP92 TaxID=1775430 RepID=A0A150AHK4_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 2.130e-19 Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 220 VEDSTCAMVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEE-GDVISTAIDIPTAGTYSFQWLMRQPSGVR--------IDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIIL 723 +E V++ EAE + G W + +D+ +ASGG+YI ++G NN N + + ++ + I T GTY+F+W +RQ R D ND+WL F + T E F K +G + F G+AE D D + V+F AGTYTM+I GRSHG+QID+I++ Sbjct: 323 IESYETGGVMVFEAERIPLRGDWKLGTDSEYASGGKYIYYDGP----NNYNAQNPANTLTYSFKINTPGTYTFKWFVRQNEEERGKVDGQQGTDLSNDAWLRFLGGVAYVGGTQTSE---FFKFYGRSD-PGFWLHGVAEFDHD-HNWVNVKFPSAGTYTMEICGRSHGYQIDKIVM 490
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: UPI0009E46A51 (T9SS type A sorting domain-containing protein n=2 Tax=unclassified Flammeovirga TaxID=2637820 RepID=UPI0009E46A51) HSP 1 Score: 97.4 bits (241), Expect = 3.920e-19 Identity = 64/177 (36.16%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 220 VEDSTCAMVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEE-GDVISTAIDIPTAGTYSFQWLMRQPSGVR--------IDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIIL 723 +E +++ EAE + GAW + +D +ASGG+YI ++G N+ N + + I+ + I T GTY+F+W +RQ R D ND+WL F TT E F K +G + F G+AE D D + V+F AGTYTM+I GRSHG+QID+I++ Sbjct: 329 IESYETGGLMVFEAERIPLKGAWKLGTDEQYASGGKYIYYDGP----NSYNAQNPANTITYSFKINTPGTYTFKWFVRQNEEERGKVDGQQGTDLSNDAWLRFLGDVAIIGGKTTSE---FFKFYGRSD-PGFWLHGVAEFDHD-HNWVNVKFPTAGTYTMEICGRSHGYQIDKIVM 496
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: UPI0009F81ED3 (T9SS type A sorting domain-containing protein n=1 Tax=Saccharicrinis aurantiacus TaxID=1849719 RepID=UPI0009F81ED3) HSP 1 Score: 94.4 bits (233), Expect = 4.500e-18 Identity = 62/168 (36.90%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 250 IIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEE-GDVISTAIDIPTAGTYSFQWLMRQPSGVR--------IDRGNDSWLFFPDATR-FGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIIL 723 + EAE +E G W + +D ASGG+YI ++G NN + + +S + DI T GTY+F+W +RQ R D ND+W+ F D FG TD F+K +G + F G+ E + + + V+ AGTYTM+IAGRSHG+QID+I++ Sbjct: 341 VFEAERIELKGDWKLGTDDANASGGKYIYYDGP----NNYQAQNPANTLSYSFDINTPGTYTFKWFVRQNEEERGKVEGQQGTDLSNDAWIKFSDGIGYFGEDQVTD----FIKFYGRSD-PGFWLHGVGEYNHSHKW-VNVKIPAAGTYTMEIAGRSHGYQIDKIVM 498
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: UPI001660067E (T9SS type A sorting domain-containing protein n=2 Tax=unclassified Flammeovirga TaxID=2637820 RepID=UPI001660067E) HSP 1 Score: 94.0 bits (232), Expect = 5.130e-18 Identity = 63/189 (33.33%), Postives = 97/189 (51.32%), Query Frame = 1 Query: 181 PIVEEAPVPMIAPVEDSTCAMVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVR--------IDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIIL 723 P +E PV +E +++ EAE + GAW + +D +ASGG+YI ++G N N + ++ + I T GTY+ +W +RQ R D ND+W+ F D +T E F K +G + F G+AE + + ++F EAGTYTM+I GRSHG+QID+I++ Sbjct: 321 PKIENCPV-----LESFEMGGIMVFEAERIALRGAWKLGTDEEYASGGQYIYYDGPN---NYKNQNPANTLTYSFKINTPGTYTLKWFVRQNEEERGKVDGKQGTDLSNDAWVRFLDDVVHIAGTSTSE---FFKFYGRSD-PGFWLHGVAEFHHE-HNWVNLKFPEAGTYTMEICGRSHGYQIDKILM 496
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Match: UPI001AA039B7 (hypothetical protein n=1 Tax=Flavicella sediminum TaxID=2585141 RepID=UPI001AA039B7) HSP 1 Score: 93.2 bits (230), Expect = 7.250e-18 Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 220 VEDSTCAMVVIIEAEDLEFSGAWSVVSDTTFASGGEYIVWEGLEEEENNTNFEEGDVISTAIDIPTAGTYSFQWLMRQPSGVR-IDRGNDSWLFFPDATRFGPAGTTDEYGTFVKVFGNAAGLRFRYQGLAEDDEDVQTEIAVEFAEAGTYTMQIAGRSHGHQIDQIILFGDTLDVDDA 753 +ED+ +V EAE + G W + D ASGG+YI ++G + + VIS I G YS +W+MRQP G R D+GND W++F + + + F K +G + F G++E + +F +AGTYT+ I GRSHG QID+ + F D + VD+A Sbjct: 297 IEDNNGLLV--FEAERFQLKGKWKLGIDPEKASGGKYIYFDGPN---SYKGVDMAHVISYTFKINKPGNYSVKWMMRQPEGERGTDKGNDIWIYFSNDLGYAK---DLQLKHFEKFYGRSND-NFTLNGVSEIHGAGHGWLTAKFTKAGTYTLNIGGRSHGLQIDKFLFFKD-MTVDEA 465 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7291.16159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7291.16159.1 >prot_L-elsbetiae_contig7291.16159.1 ID=prot_L-elsbetiae_contig7291.16159.1|Name=mRNA_L-elsbetiae_contig7291.16159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=214bp MPGATAPCVIGDDSTPAPIVEEAPVPMIAPVEDSTCAMVVIIEAEDLEFSback to top mRNA from alignment at L-elsbetiae_contig7291:4610..5907+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7291.16159.1 ID=mRNA_L-elsbetiae_contig7291.16159.1|Name=mRNA_L-elsbetiae_contig7291.16159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1298bp|location=Sequence derived from alignment at L-elsbetiae_contig7291:4610..5907+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7291:4610..5907+ >mRNA_L-elsbetiae_contig7291.16159.1 ID=mRNA_L-elsbetiae_contig7291.16159.1|Name=mRNA_L-elsbetiae_contig7291.16159.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1284bp|location=Sequence derived from alignment at L-elsbetiae_contig7291:4610..5907+ (Laminarionema elsbetiae ELsaHSoW15)back to top |