prot_L-elsbetiae_contig7287.16156.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7287.16156.1
Unique Nameprot_L-elsbetiae_contig7287.16156.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length242
Homology
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BLAST of mRNA_L-elsbetiae_contig7287.16156.1 vs. uniprot
Match: D8LSP7_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP7_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 2.890e-73
Identity = 133/212 (62.74%), Postives = 156/212 (73.58%), Query Frame = 0 
Query:    5 AVPFQGVPEVNAEVWSSVTGDGGQQQPPRTTAIFFLDRFSEGFAAALKVAESXXXXXXXXXXXXXXGGIGFVWADAPCQEEFARALGVSDASEVPALVVFSPKHQKSASFVGAWESESMASFLRKALGGRAPLFPIGGDNAPRLDESTDCSQRPPPAWLSGGDGFGQGGDAIEDDDMGDFMVEILAEEAKAKRELEEQVARDLEEQKEAEKA 216
            A  F+GVPEV  E+W+SVTG+G     P T  +FFLDRFSE FA+ L+ AE               GGI FVWADAPCQE FA+ LGVSDASEVP LV FS KH+KS  FVGAWE++S+ +FL +ALGGR PLFP+ G+ APR DES DC+QRPPPAWL+GG G G G  A EDD MGDFM EILAEEAKAKRELEE+VAR L+E ++A+ A
Sbjct:  639 AATFKGVPEVTPELWASVTGEGAGGGNPLTLGVFFLDRFSERFASDLRAAEEAAEKATARLGG---GGIAFVWADAPCQEGFAKTLGVSDASEVPVLVAFSSKHKKSTRFVGAWEADSLGTFLGRALGGRVPLFPVDGE-APRPDESVDCAQRPPPAWLAGG-GEGTGDAAEEDDGMGDFMAEILAEEAKAKRELEEEVARGLQEMEDAKGA 845
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BLAST of mRNA_L-elsbetiae_contig7287.16156.1 vs. uniprot
Match: A0A7S2UX42_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX42_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.760e-11
Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 0 
Query:   75 FVWADAPCQEEFARALGVSDASEVPALVVFSPKHQKSASFVGAWESESMASFLRKALGGRAPLFPIGGDNAPRLDESTDCSQRPPPAWLSGGDGFGQGGDAIEDDDMGDFMVEILAEEAKAKRELEEQVARDLEE 209
            F W DA C  +F+ +L V D + +PA+V++SPK Q+SA  VG +E +S+ +FL++ L G    + +  +  P      DCS    P          Q     ED+DM D M EILAEE + +RE+ EQ  R   E
Sbjct:  298 FSWVDATCDPDFSASLDV-DLAMLPAVVLYSPKKQRSARHVGTYEYDSVKTFLQQVLRGSTHTYELYQEPVP---SDVDCSDGNRP--------ISQDIPVEEDEDMDDLMAEILAEEQR-EREMREQELRXXXE 419
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BLAST of mRNA_L-elsbetiae_contig7287.16156.1 vs. uniprot
Match: A0A7S2GE96_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GE96_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 9.240e-11
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 0 
Query:   75 FVWADAPCQEEFARALGVSDASEVPALVVFSPKHQKSASFVGAWESESMASFLRKALGGRAPLFPIGGDNAPRLDESTDCSQRPPPAWLSGGDGFGQGGDAIEDDDMGDFMVEILAEEAKAKRELEEQVARDLEEQKE 212
            F WA+  CQ   A A  V   +++P LV +SPK Q+ A F+G + +E++   L   L GR    P+    +P + +  DC+     +     + F       +++D+GDFM EILAEE +AK+EL +++AR+  E K+
Sbjct:  299 FSWANGACQLSMAEAFDVHP-TQLPTLVAYSPKKQRFAGFIGVYGAEAVKDLLSGVLSGRVRTTPMY--QSPEVSD-LDCTGVEVDSSADIAEVF------EDEEDIGDFMAEILAEEQRAKQELADEIAREAAEAKQ 426
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BLAST of mRNA_L-elsbetiae_contig7287.16156.1 vs. uniprot
Match: A0A7S2GFB5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GFB5_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.140e-10
Identity = 47/138 (34.06%), Postives = 76/138 (55.07%), Query Frame = 0 
Query:   75 FVWADAPCQEEFARALGVSDASEVPALVVFSPKHQKSASFVGAWESESMASFLRKALGGRAPLFPIGGDNAPRLDESTDCSQRPPPAWLSGGDGFGQGGDAIEDDDMGDFMVEILAEEAKAKRELEEQVARDLEEQKE 212
            F WA+  CQ   A A  V   +++P LV +SPK Q+ A F+G + +E++   L   L GR    P+    +P + +  DC+     +     + F       +++D+GDFM EILAEE +AK+EL +++AR+  E K+
Sbjct:  619 FSWANGACQLSMAEAFDVHP-TQLPTLVAYSPKKQRFAGFIGVYGAEAVKDLLSGVLSGRVRTTPMY--QSPEVSD-LDCTGVEVDSSADIAEVF------EDEEDIGDFMAEILAEEQRAKQELADEIAREAAEAKQ 746
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7287.16156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSP7_ECTSI2.890e-7362.74Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2UX42_9STRA3.760e-1137.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GE96_9STRA9.240e-1134.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2GFB5_9STRA1.140e-1034.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..224
NoneNo IPR availableGENE3D3.40.30.10coord: 11..138
e-value: 1.5E-5
score: 27.4
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 35..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7287contigL-elsbetiae_contig7287:2571..5842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7287.16156.1mRNA_L-elsbetiae_contig7287.16156.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7287 2571..5842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7287.16156.1 ID=prot_L-elsbetiae_contig7287.16156.1|Name=mRNA_L-elsbetiae_contig7287.16156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
GSGPAVPFQGVPEVNAEVWSSVTGDGGQQQPPRTTAIFFLDRFSEGFAAA
LKVAESAAELAAGRLAGGPAGGIGFVWADAPCQEEFARALGVSDASEVPA
LVVFSPKHQKSASFVGAWESESMASFLRKALGGRAPLFPIGGDNAPRLDE
STDCSQRPPPAWLSGGDGFGQGGDAIEDDDMGDFMVEILAEEAKAKRELE
EQVARDLEEQKEAEKAEAPAKRTKKTVKKRKKKKSGSRSEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf