mRNA_L-elsbetiae_contig7285.16155.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A6H5L192_9PHAE (HOOK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L192_9PHAE) HSP 1 Score: 262 bits (670), Expect = 8.910e-73 Identity = 270/588 (45.92%), Postives = 317/588 (53.91%), Query Frame = 1 Query: 1 LQVVDLKAEVSRLKGQLEDTETASAKAVTAIEAQRDAAVGRQEELSEDLRRTRQAAERLTVSEEDAVIAVEKDMRAKHEREVAALRERASKAEERVLVLEPLESEVLRLRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGGD---GVGIGEG---------------------MSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSFHANLASERELRAAAEASLXXXXXXXXXXXXXXXXLREEHRRTRLAALERKAEREAEALRXXXXXXXXXXXXXXAKVEGERGEERAEFQSRIAAAAEAAAREEERVSAELAAAEELRERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKVELEAKLEGERRSAADEVAVARERAAKEEEGRLXXSRLKDEAKQEAQKLEETLSAGKQAALKAIGRLETNAREQREEAAVLQQELHAGHEAKVAALNGE 1692 ++VVDLKAEVSRLK QLE A A+AV+ +EAQRDA A++AE R L + REKIEELS PGQLK+EE AHA+VLDRCL LE EV+QIPQL+RQV +YRRS TDME+A+RE+SRELE A+EE RLSQEV L + AAR E +RLQE +R +TEG D G GIGEG +SE NP L EE+ARLR NEQL AKVDYNTEETI +LE+KA DASRLAD FH +LASERE+RAAAE SL LREEH T + LE ++ER E LR XXXXXXXX +VE ER ERAEF+ EAAAR E+ XXXXXXXXXXXXXXXXXXX V+ ELE KL+ ERR AA+E+ XX A+++ ++L E S GKQ ALKAIGRLETNAR+QREE+A+L QE A HEAK+AAL+GE Sbjct: 295 VEVVDLKAEVSRLKDQLERAAAARAEAVSVVEAQRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEAEXRASALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYREKIEELSGLPGQLKREEKAHAEVLDRCLRLETEVTQIPQLRRQVGQYRRSQTDMEVASREQSRELETAREESARLSQEVKDLRESYEAARGEQRRLQERWTAR---DTEGSDDEWAGGGIGEGGHGFLGAELLGGVFAGQAVVGISEFNPELMEEMARLRLANEQLKAKVDYNTEETILDLERKAGDASRLADKFHDSLASEREVRAAAELSLAEARARIADLESQIVALREEHLAT-VTRLEGESERREEGLRGEMAAAXXXXXXXXXRVEEERSGERAEFR-------EAAARXXXXXXXXXXXXXXAHEKEKGESARXXXXXXXXXXXXXXXXXXXVAE-----------VEKELEGKLQEERRLAAEELXXXXXXXXXXXXXXXXXXXXXXXAERQLRELAEKFSTGKQEALKAIGRLETNARDQREESALLLQEQMADHEAKMAALSGE 860
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A7S2P099_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P099_9STRA) HSP 1 Score: 110 bits (274), Expect = 7.850e-22 Identity = 77/204 (37.75%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 304 LESEVLRLRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGGDGVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 ++ E LRLRD++DI + ++ K + E+ L +CREKIE L++EE AHA ++D+CLE+E E++Q+ LKRQ++ YR TD E+A E +L +E+ + L AL G ++E LQ+ L EGG +G GMSELNP L EEL LR +L ++++ LE+ DDA RL++ F Sbjct: 290 MKEENLRLRDELDIFQCSKEKFTHTEEQLRKCREKIEAFGDVHDALQREEKAHAVLVDKCLEMENELAQLKPLKRQLEEYRVRATDAEVALAECRDDLRRFKEKSSGLEGANLALQRGVNLQQSEADALQKRLQEEGQRSGEGGS---AVGVGMSELNPELMEELKMLRCEYARLKDFEAKREVDSVQRLEESCDDAKRLSERF 490
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A7S2U7B9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7B9_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.300e-18 Identity = 72/251 (28.69%), Postives = 139/251 (55.38%), Query Frame = 1 Query: 178 TVSEEDAVIAVEKDMRAKHEREVAALRERASKAEERVLVLEPLESEVLRLRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMA---NREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGG--DGVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 ++ +E + ++ ++ K+E E++AL+ + +E E+ LRD++D+ + + KL+ VE L +C+EK+EE++ L +EE+AH+ ++ +CL+LE E++ + LKRQ++ Y+ D E+ E R L+ QE + +++++ A HQ + +E+ R ++E + +GEGMSELNP L EE+ RLR N + ++++++E++ DD +RL+D + Sbjct: 108 SLKQETEFMNLKNELEDKYEDELSALKREVTSLQEFKQEAGEAREEISTLRDELDVNQHSSEKLAFVEDQLRKCKEKLEEMNDTKEALVREEEAHSALISKCLQLENELTALNPLKRQLEEYKTRAVDAEVKVTEYEEDIRTLKSRQETLVGMNEDLHLGA-------KIHQEVNQEMSKRLVEEANSNPVENLSTVGEGMSELNPELMEEVQRLRNENARFKEFAAKRENDSVQKMEEQLDDKARLSDKY 351
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: K0T9J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9J6_THAOC) HSP 1 Score: 98.2 bits (243), Expect = 1.150e-17 Identity = 72/210 (34.29%), Postives = 114/210 (54.29%), Query Frame = 1 Query: 289 LVLEPLESEVLRLRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGGD-GVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 + + L+ E RL+D++D+LR ++ KL+ E+ L +CR+KIE + L++EE AHA +D+C+ LE +++ + LKRQ++ YR T+ E A E +L +E+ + L L + A +HQ L R + T GD G +G+GMSELNP L EE+ LR +L + ++ LE+ DD RLAD + Sbjct: 295 IAVNQLKDENSRLQDELDVLRNSKEKLAFSEEQLRKCRDKIESIGDAHEALQREEKAHAAAVDKCVSLENDLAILKPLKRQLEEYRVRATNAEAALEESREDLRRMREKSSGLEGAHIQLRE----ATTQHQMEANALSRRLQEGTGKLGDVGNALGKGMSELNPELLEEIKMLRSEYSRLKEFESKREVDAVQRLEETLDDTKRLADRY 500
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A7S3V7Q8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7Q8_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.050e-17 Identity = 86/273 (31.50%), Postives = 143/273 (52.38%), Query Frame = 1 Query: 121 RQEELSEDLRRT--RQAAERLTVSEEDAVIAVEKDMRAKHEREVAALRERASKAEERVLVLEPLESEVLRLRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQE---EVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMD---ETEGGGDGVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 R+ E+ L T R A R+ + E +A E ++R ++V L + K++ + + EV LRD+VD+L+ A+ KL E L +C+ K+E+L L+ EE AH+ + +CL LE +++ + LKRQ++ Y+ TD E+ + E++ +E ++T L++E+ LA +E R + + H T+ ET +G G+SELNP L EEL RLR N +L +++++ LE+K DDA RL+ F Sbjct: 462 REAEVQSTLEETEARHRASRMKLESEG--MARENEIRDHLSQKVLGLERQLKKSQSVAVQAAEAKEEVASLRDEVDVLQHAKVKLQLTEDQLRKCKGKLEQLGDVSKALQNEEKAHSDAVAKCLNLENQLAALVPLKRQLEDYKTRATDAEVRLVDYEDEIKRLEELGGDITGLNKELK-LATFRQQEESEDLRRKMQQHEETVTIPTETHA------VGGGISELNPELKEELLRLRNENARLKVFAAKREDDSVQRLEEKLDDAIRLSAKF 725
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A7S1ZBF5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZBF5_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 8.630e-16 Identity = 63/192 (32.81%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 343 ILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGA-ARNEHQRLQEELHSRTMDETEGGGDGVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 +L+ ++ KLS E +C++K+ L QLK+EE+AHA+ +D+CL E +++ + +KRQ+ + + D E+ E EL + QE+ L +G+ RN HQ +E L + GG IG+GM+ELNP L EEL RLR N++L ++++++LE+ DD +L+ F Sbjct: 353 LLQHSQHKLSVTEDQYKKCKDKLLSLLDIEQQLKREEEAHAKSVDQCLTYENQLNALKHVKRQLKQSQNRALDAEVKLSELQDELHKTINRTNQYEQEIKELKEGNQMMTRNIHQNFEEGLALQDQSNDYGG-----IGDGMTELNPELKEELLRLRNENQRLKDFEQKRQQDSVQKLEESLDDTQKLSTKF 539
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A4D9CTG0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTG0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.710e-13 Identity = 67/213 (31.46%), Postives = 107/213 (50.23%), Query Frame = 1 Query: 298 EPLESEVLRLRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGG----GDGV---GIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 E L ++V L+D+VD+LRPA L+ E +L + R K++ L +L+ E+ AH + L++CL+LE E+ Q+P LKRQV+ + T+ E+ RE + ++E+A L A R+ + GG G+G G+G G++E NP + + L E+L A++ E I LE + D RLA+SF Sbjct: 414 EGLRAQVKELQDEVDVLRPAAESLALTEASLEKARGKLQGLQDVRDRLQAEQAAHGEALEKCLQLERELQQVPVLKRQVEALKAGATENELLLRELQATAAEQERTAKAQTEEIATLRQSLSMAA-----------LRSTEPATGGMLVVGEGQVGGGVGVGLTECNPDVVRNIRTLEAEVERLRAQISDTAVEKIEALEVEKDRHRRLAESF 615
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A482SWU4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWU4_9ARCH) HSP 1 Score: 84.0 bits (206), Expect = 3.250e-13 Identity = 56/212 (26.42%), Postives = 117/212 (55.19%), Query Frame = 1 Query: 325 LRDDVDILRPAEAKLSKVEQNLSRCREKIEELSAFPGQLKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGGDGVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSFHANLASERELRAAAE 960 ++D++++LRP A+ E +++ +EK+E+L++ Q KE ++H + LELE +V ++ + K+ V++YR ++ +AN+E ++ Q E+ ++ + ++L E Q L +L + + +E I EG+SE NP L +EL LR+ +L++K+D+++ E++ +LE++ D + + + ++ A AE Sbjct: 253 VQDELEVLRPLAAQAQAYENQVTKLKEKLEDLASIKQQYVKETESHQVTYSKLLELEKQVEELIENKKLVEKYRNELAEIYVANQEHIQKASQYQAELEQVKSQNSSLQXXXXXXXKEQQVLSHQLDAFS-EEARANTHYNSISEGLSEFNPVLMQELMSLRQEKAELLSKLDHSSLESLHKLEKENADVKCIYSNVQSKYLQTKDQLAVAE 463
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A8K1FK20_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK20_PYTOL) HSP 1 Score: 65.9 bits (159), Expect = 1.710e-7 Identity = 53/182 (29.12%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 439 LKKEEDAHAQVLDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGGDG-----VGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSFHANLASERELRAAAEASL 969 L++ E+A+++++++ L LE++V++ L+R++ + ++T ++ E +L E+ QE S AA +E L ++L + +G G VG+G+GMSELNP L ++LARL N L +++D +T + I L + DD +RL SF + +L + +A L Sbjct: 349 LRRTEEANSELVEKNLALESQVAKAASLQRKLADAKDANTTIQFRVSELEAQLSRQGAELDAKRQECEV----SAAALHEAAVLNQQLQETVDHQLQGSGGSYGPASVGVGDGMSELNPELMQKLARLEHENATLKSQIDGSTSDRIDSLLDEIDDLTRLKKSFESKYFETSDLLKSTQAEL 526
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Match: A0A7S2KF11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KF11_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 4.570e-7 Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 472 LDRCLELEAEVSQIPQLKRQVDRYRRSHTDMEMANREKSRELEMAQEEVTRLSQEVAALADGSGAARNEHQRLQEELHSRTMDETEGGGDGVGIGEGMSELNPALTEELARLRRTNEQLVAKVDYNTEETIRELEQKADDASRLADSF 915 + + ++LE E+S + L+RQ++ Y+ T E+ + S EL+ RNE + LQ+ L T + G + +G+GEG+SELNPA+ EE+ RLR N L V +T++ + +L + DD+ RL++SF Sbjct: 383 VQQVIDLENELSSLAPLRRQLETYKARATAAEVKLTDVSDELQKXXXXXXXXXXXXXXXXXXXQFRRNEAEELQKMLKEETKKDL--GNEILGLGEGVSELNPAVAEEITRLRNENSALKNFVARHTQDAVEQLGEDLDDSRRLSESF 528 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7285.16155.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7285.16155.1 >prot_L-elsbetiae_contig7285.16155.1 ID=prot_L-elsbetiae_contig7285.16155.1|Name=mRNA_L-elsbetiae_contig7285.16155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=564bp LQVVDLKAEVSRLKGQLEDTETASAKAVTAIEAQRDAAVGRQEELSEDLRback to top mRNA from alignment at L-elsbetiae_contig7285:2687..9175+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7285.16155.1 ID=mRNA_L-elsbetiae_contig7285.16155.1|Name=mRNA_L-elsbetiae_contig7285.16155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6489bp|location=Sequence derived from alignment at L-elsbetiae_contig7285:2687..9175+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7285:2687..9175+ >mRNA_L-elsbetiae_contig7285.16155.1 ID=mRNA_L-elsbetiae_contig7285.16155.1|Name=mRNA_L-elsbetiae_contig7285.16155.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3384bp|location=Sequence derived from alignment at L-elsbetiae_contig7285:2687..9175+ (Laminarionema elsbetiae ELsaHSoW15)back to top |