mRNA_L-elsbetiae_contig7275.16141.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7275.16141.1
Unique NamemRNA_L-elsbetiae_contig7275.16141.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A6H5L4H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H5_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 1.230e-73
Identity = 112/131 (85.50%), Postives = 124/131 (94.66%), Query Frame = 1
Query:   25 TTQKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERIMQIHAANSS 417
            T Q+KDEHVTEVIGHSSHVT+YALDVSTK+WERKGMEGSLF+VRR SHPHF MMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFG+ PSP+GHLHGVWFH+P+ERD+MQALLERIMQ+  A+ +
Sbjct:   23 TLQRKDEHVTEVIGHSSHVTVYALDVSTKAWERKGMEGSLFVVRRKSHPHFMMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGDKPSPNGHLHGVWFHSPDERDQMQALLERIMQVQNADGA 153          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: D7G2V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V2_ECTSI)

HSP 1 Score: 245 bits (626), Expect = 6.670e-70
Identity = 110/129 (85.27%), Postives = 123/129 (95.35%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERIMQIHAANSS 417
            ++KDEHVTEVIGHSSHVT+YALDVSTK+WERKGMEGSLF+VRR SHPHF MMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFG+ PSP+GHLHGVWFH+P+ERD+MQALLERIMQ+  A+ +
Sbjct:   51 KRKDEHVTEVIGHSSHVTVYALDVSTKAWERKGMEGSLFVVRRKSHPHFMMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGDKPSPNGHLHGVWFHSPDERDQMQALLERIMQVQNADGA 179          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A7S2RPJ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPJ6_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.350e-17
Identity = 44/129 (34.11%), Postives = 75/129 (58.14%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERIMQIHAANSS 417
            ++ D+ +TEV+G ++ VT+Y  D ++++W R   EG LF+V+R+++P F+M+V+NRL   +    IT SF    +E YL+F         +  +    +HG WF +P ER R+  LL+R++       S
Sbjct:   15 KRADDEITEVLGSAAFVTMYLFDSASQAWNRSECEGPLFVVKRNNNPRFQMIVMNRLSRSNEVHDITASFFAECIEPYLIFRSN------QTAAGDSDIHGTWFPDPAERQRIFQLLQRLISAQTVMES 137          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A7S2A928_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A928_TRICV)

HSP 1 Score: 89.4 bits (220), Expect = 8.490e-17
Identity = 44/127 (34.65%), Postives = 74/127 (58.27%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGH-----LHGVWFHNPEERDRMQALLERIMQ 396
            Q+ D  + ++ G ++HV +Y  D S + WE++ +EGSLF+ +RS  P FK++VLNR   D++   IT  F++   + YL+F         E  S  G      + G+WFH+  ER+ + ALL++I++
Sbjct:   20 QRLDSSILDIAGSATHVVLYEFDNSEQKWEKRNVEGSLFLAKRSEAPRFKLVVLNRNSRDNLEVPITGKFQMQVRDPYLIFR--------EEKSSGGSGGSTKILGIWFHDSAEREAVSALLQKIVE 138          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A7S4W5R9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W5R9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.180e-16
Identity = 43/122 (35.25%), Postives = 76/122 (62.30%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERIMQ 396
            Q+ D  + +++G ++HV +Y    + + WE++ +EGSLF+ +RS  P FK++VLNR   +++   I+ +F++   E YL+F  +     G NP     + G+WFHN EER  + ALL+R+++
Sbjct:   19 QRLDPSILDIVGSATHVVLYEFSDTEQQWEKRNVEGSLFLSKRSDTPRFKLVVLNRSSTENVEVPISGTFQMQVREPYLIFREEKG---GVNP-----IRGIWFHNGEERSAIAALLDRVVK 132          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A1Y2GZU5_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GZU5_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 1.380e-16
Identity = 36/121 (29.75%), Postives = 70/121 (57.85%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRM-QALLERI 390
            Q+ D H+++++  SS+V +Y  D  +++W +KG+EG++F+ +RSS P +   ++NRLG D++   +     +    DY+++                H+HG+W + P +RDR+ + LLE +
Sbjct:   15 QRHDPHISDILDSSSYVVVYKFDEDSQAWTKKGVEGTMFVFKRSSPPTYGFFIMNRLGLDNLMADLVGDMALQLTSDYIIY----------------HIHGIWIYEPADRDRIGEKLLEYV 119          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A7S0S2H6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S2H6_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 3.350e-15
Identity = 39/120 (32.50%), Postives = 74/120 (61.67%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERI 390
            ++ D  V +V+G+++HV +Y + + T++WERK +EGSLF+++R ++P F+++VLN+L  ++  + I   F+V     YLM++              G +HG+WF+  ++ D +  LL R+
Sbjct:   19 KRLDPEVEQVLGNAAHVCLYVMSLETQAWERKNVEGSLFLLKRRTNPRFQIVVLNKLATENYYETIHGGFEVEIQAPYLMYT-----------QGDGKVHGIWFYEEKDLDAVAGLLSRV 127          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: B8C1C7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1C7_THAPS)

HSP 1 Score: 84.7 bits (208), Expect = 1.270e-14
Identity = 39/122 (31.97%), Postives = 75/122 (61.48%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERIMQ 396
            Q+ D ++ ++   ++HV +Y   ++ K+WE+K +EGSLF+ +RS  P FK++VLNR   D++   IT +F++   + Y++    +    G N +    + G+WFH+ +ERD + + LE +++
Sbjct:   18 QRIDSNIVDLAITATHVVLYEYSLTKKTWEKKNVEGSLFVTKRSDAPRFKLIVLNRNSTDNLEVPITSTFQMQVRDPYMIIRDSSN---GNNQA----IRGIWFHDGKERDSVASYLENVVK 132          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A7S3QNR3_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QNR3_DUNTE)

HSP 1 Score: 87.0 bits (214), Expect = 1.890e-14
Identity = 40/120 (33.33%), Postives = 75/120 (62.50%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERI 390
            ++ D  + +V+G ++HV +YA+ +    WERK +EGSLF+++R + P F++ VLN+L  ++ ++ I  +F V     YLM++       G+     G +HG+WF++ +E D++ +LL R+
Sbjct:   19 RRVDSDIEQVLGTAAHVCLYAMTMDNPVWERKNIEGSLFLLKRRTSPRFQLAVLNKLSTENYTETIHGAFDVEISSPYLMYT------LGD-----GMVHGIWFYDEQELDKIASLLNRV 127          
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Match: A0A7S1CT69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CT69_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.910e-14
Identity = 39/126 (30.95%), Postives = 73/126 (57.94%), Query Frame = 1
Query:   31 QKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFIVRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMF----SCKTPCYFGENPSPSGHLHGVWFHNPEERDRMQALLERIMQ 396
            Q+ D  + ++   +SHV +Y   + T+ W ++ +EGSLF+V+RS  P FK++V NR   +++  GIT +F++   E YL+F    S           +    + G+WFH+ +ER+++ + LE +++
Sbjct:   24 QRLDPQIVDLAITASHVVLYQFSLETQQWIKRNVEGSLFVVKRSDMPRFKLIVSNRNSTENLEVGITSTFQMQLREPYLIFRDSASXXXXXXXXXXTAADEAIRGLWFHDGKEREQVHSYLENVVK 149          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7275.16141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4H5_9PHAE1.230e-7385.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2V2_ECTSI6.670e-7085.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RPJ6_9STRA1.350e-1734.11Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2A928_TRICV8.490e-1734.65Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4W5R9_9STRA1.180e-1635.25Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1Y2GZU5_9FUNG1.380e-1629.75Uncharacterized protein n=1 Tax=Lobosporangium tra... [more]
A0A7S0S2H6_9CHLO3.350e-1532.50Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
B8C1C7_THAPS1.270e-1431.97Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3QNR3_DUNTE1.890e-1433.33Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7S1CT69_9STRA1.910e-1430.95Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7275contigL-elsbetiae_contig7275:1517..8066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score245.4
Seed ortholog evalue7.2e-62
Seed eggNOG ortholog2880.D7G2V2
Preferred nameDCP1A
KEGG koko:K12610,ko:K12611,ko:K12612,ko:K12655
KEGG Pathwayko03018,ko04622,map03018,map04622
KEGG ModuleM00395
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000184,GO:0000288,GO:0000290,GO:0000291,GO:0000578,GO:0000932,GO:0000956,GO:0002119,GO:0002164,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005667,GO:0005737,GO:0005829,GO:0005845,GO:0006139,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006979,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007316,GO:0007350,GO:0007351,GO:0007389,GO:0007568,GO:0008047,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008298,GO:0008340,GO:0008358,GO:0008595,GO:0009056,GO:0009057,GO:0009266,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009628,GO:0009719,GO:0009790,GO:0009791,GO:0009798,GO:0009880,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010033,GO:0010259,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010603,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016441,GO:0016458,GO:0019094,GO:0019219,GO:0019222,GO:0019439,GO:0019894,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030234,GO:0031047,GO:0031086,GO:0031087,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034428,GO:0034518,GO:0034613,GO:0034641,GO:0034655,GO:0035194,GO:0035195,GO:0035282,GO:0035770,GO:0036464,GO:0040012,GO:0040029,GO:0042221,GO:0042802,GO:0043085,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043487,GO:0043488,GO:0043928,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0044703,GO:0045451,GO:0045495,GO:0045893,GO:0045935,GO:0046483,GO:0046700,GO:0048468,GO:0048469,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051641,GO:0051704,GO:0051716,GO:0060147,GO:0060148,GO:0060255,GO:0060293,GO:0060810,GO:0060811,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0097159,GO:0098552,GO:0098562,GO:0098745,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902115,GO:1902680,GO:1903311,GO:1903506,GO:1903508,GO:1903608,GO:1990521,GO:1990904,GO:2000112,GO:2000637,GO:2001141
EggNOG free text desc.mRNA-decapping enzyme
EggNOG OGsKOG2868@1,KOG2868@2759
EC3.4.19.12
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03019,ko03036,ko04121
Ec32 ortholog descriptionmRNA decapping complex protein
Ec32 orthologEc-07_005620.1
Exons5
Model size1869
Cds size1869
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7275.16141.1prot_L-elsbetiae_contig7275.16141.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7275 1517..8066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816810.3299506-CDS-L-elsbetiae_contig7275:1516..25001622816810.3299506-CDS-L-elsbetiae_contig7275:1516..2500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 1517..2500 -
1691683830.7639248-CDS-L-elsbetiae_contig7275:1516..25001691683830.7639248-CDS-L-elsbetiae_contig7275:1516..2500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 1517..2500 -
1622816810.3420918-CDS-L-elsbetiae_contig7275:3324..38231622816810.3420918-CDS-L-elsbetiae_contig7275:3324..3823Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 3325..3823 -
1691683830.7805884-CDS-L-elsbetiae_contig7275:3324..38231691683830.7805884-CDS-L-elsbetiae_contig7275:3324..3823Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 3325..3823 -
1622816810.355879-CDS-L-elsbetiae_contig7275:4248..44541622816810.355879-CDS-L-elsbetiae_contig7275:4248..4454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 4249..4454 -
1691683830.7915852-CDS-L-elsbetiae_contig7275:4248..44541691683830.7915852-CDS-L-elsbetiae_contig7275:4248..4454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 4249..4454 -
1622816810.3672464-CDS-L-elsbetiae_contig7275:4962..50251622816810.3672464-CDS-L-elsbetiae_contig7275:4962..5025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 4963..5025 -
1691683830.801869-CDS-L-elsbetiae_contig7275:4962..50251691683830.801869-CDS-L-elsbetiae_contig7275:4962..5025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 4963..5025 -
1622816810.3774052-CDS-L-elsbetiae_contig7275:7949..80661622816810.3774052-CDS-L-elsbetiae_contig7275:7949..8066Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 7950..8066 -
1691683830.8109217-CDS-L-elsbetiae_contig7275:7949..80661691683830.8109217-CDS-L-elsbetiae_contig7275:7949..8066Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7275 7950..8066 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7275.16141.1

>prot_L-elsbetiae_contig7275.16141.1 ID=prot_L-elsbetiae_contig7275.16141.1|Name=mRNA_L-elsbetiae_contig7275.16141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=623bp
MHVLSIRVTTQKKDEHVTEVIGHSSHVTIYALDVSTKSWERKGMEGSLFI
VRRSSHPHFKMMVLNRLGFDHMSQGITQSFKVHRLEDYLMFSCKTPCYFG
ENPSPSGHLHGVWFHNPEERDRMQALLERIMQIHAANSSGSGNGHGGGGG
SASPAPASSSAPSSQAAAEAPDQHQRPQHQQPQHQQQRQQQQQQQQQQQQ
RVLTTPTNTRYPQPAPPPVYQPGYQQQQQVHQHNTAQTPPVTAAAAAVPA
KSRPQEMADRAGGVVDERSSPSAAPPVAVAPDTAASLGGRTSAEATSAAT
EILVAALGMSPSSMSPAPVQQPQQRHRQRPQQQQQQQQATGESGGTLRTR
TALPRPPPAADASSAARTTKGTTVKATTTTAAAAAAATTTTSRLRAPPLS
AAATAAAREASMLLTPSQLLLSAESNSSGSRSSSAASQRGGDTAGSSTAG
DGRTAAVAAAAAGGGAGTVARDVKVSSSAKVSAGSLDTRARGSEPRDDGP
RDGGDRGGNGRGATVGRRRTDKESAVSSGKTNGPVAGAAVATAATEGGSV
RRGSTPSQGEAAAAAAAAVGGGASGGSGGQPVAGLLDKRALQITLMSLVE
DDRFVDMLHARYVALMKRRSTR*
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mRNA from alignment at L-elsbetiae_contig7275:1517..8066-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7275.16141.1 ID=mRNA_L-elsbetiae_contig7275.16141.1|Name=mRNA_L-elsbetiae_contig7275.16141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6550bp|location=Sequence derived from alignment at L-elsbetiae_contig7275:1517..8066- (Laminarionema elsbetiae ELsaHSoW15)
ATGCATGTTCTTTCCATTCGTGTCACGACTCAGAAAAAGGACGAGCATGT GACAGAGGTGATTGGCCACAGCAGCCACGTCACCATCTATGCGTTGGACG TCAGCACCAAGTCTTGGGTGAGTCGGTCGGCTTATTTTTGTATATGCATG TAGGGGTAGCCTTCGCCTCCTAAGCTGGGGGTCTGGGTGTGAGACGGGTC AGGTTATCTTGCGAGTGTTCGTTGAAAACGTGTAGAAGTTATTTAATATG TCATTGTGACACAGGTTGTCTCCATTCTCGGAAGCGCTGCGGGTCCTCTT TTGGGCTCTTCACAGAGCAGCACGCTTATTCACTTGGTTTTAGAGTGCAT TTGAGCCGCTGAAAACGCTCTCGAGCTCTGTGCAAACCTCTATTTTAATT TCGCATTTTTGGCGCCGTGTGGCCATTTCGATCGGGTTCGTGCTCTCCGC TCCCAGTCTGGCTCTCTACCTCTGTCTCTCTCTCTCTCTCTCTGCGTCGC TTTGTTTCACCTGTTTCGCTCTTTCTCCGTGCTTGCGAGGTTCCTTCCTG CTGGCCTGTGTGCTCGCTCCTCTCCCGTTCTCTCGCAACAGACCGAATGC ATTTCTGGATTTGTGACTGTACAATGTTTGAGGGATGTGTACCAATAGGC CACGCCTCATAAAGAAAGAGGCACGAGAGAGACGGGAGAGAGAGAGAGAG AGAGAGAGAGAGAGTCGAGTGAAGAGAGAGCCCGAAAAGGAAGAGGTATT GTAAGTGATTTGTTTTTTGAAAATCGCAACACGTCCCAAAGTCAGGTGAT GATGTGATGATGCCAATCCATAGTTTTCCGGCACACATGCAGTCAACACA CCACTTCTCACGTATCTTCGGACTCGCTCAAATTTAACGTGGCGGTGGAA GCCGCCGAAAACCTTGTTACAGCAGTAGCAGTTTATGGTGATGATCGTAC CGATAAGTACAGGAAACATGTTTTCGCGGATGGATATGTTTTTTGCTGCA CTAGTTCTACGCCCGTGGTACATATGTATGTACCTGAAGCCGCACGCGTG CATACATCCGATCCGGAGTACTGTTTGCCGTGGATTAAAAAAAAATCACA AGTGTACCTTTCAACCTCTCTGGCACTAGGTTCCTCAGAGCGCTCTAGTC GAGCAGCCCGCGCGCGCGCCCGGACTGCTGTAACAGAAAAGTCAGGTCCG CACAGCAGAAGCGAAGTTCTCTGTGCGGAAAAGAGACTTATTTTTGAAGT CGAGCCTCCTTGCTGAAAACGCACCGCGGCCGTGTCGCCGCCCGCAACAA ACTGGGGACGTCCGTTGAATCTCTAGATAGAAAGGTTCATCGGCCCTCAA AACATCACTGCTAGTGTTCGCTCGAAACGTTTTTCACTTTTGTACGGCTG TCCCGGGTTCTGAACTCTTCTGAAAGCAGTCTAAATTCAGTATGTTCCAA TGATCGCTACAATAAAACGGTGTCGAAGTGCCGTACGGGCCAAACGTACT TCTCTACTCCCGGGAGAACGCCGGATAGAGTCCCGCCTCTAGCGCTCGGT TACTTCGTAATACCCAACGGCAACAGCAAGCAGATCGATCTACACCGGTT GCTGGTGTAGACGGAAGTCGAAGAGATGTTTGGCGATGTCCTCCCCCCAC CACCTTTTCGGCCTGGAAGCATGATCTCTCTGTCGTAGCCCCGGGGGCGC ATGACTTTTGCACAAAAACAAAATCCCTCCCCTTTTTCCATTTACCCTCG GGGTAGTGTGCCACACCCCCCCCCCCCCCCCCCCGGGGCTACGACAGAGA CATTTTGCCCACTTGACACAGTATTTTACCACCAAGCAGCGTTCACTTGG GATGAGATTCATGGCCTATTGTCGGCAGAACGAATGCGTCACTTCGCCAT GAGCATCAAGTCACATCGAGCAGTATGAAATGCCATCGTTGTGTGTCAGT TGATATTCAGACAAATTCCTTTGGGACCAGTCTCCAAATAAAACAGCACC ACACCCACGCGTAAATTCAGCACGTACATACGGACAATAAAAGCACAACA AGATTGACGAACCCCCTGTCGCCGCATGCCCGACAAATGAAACCGGGTTC AGAAATCGGCAAGGGGCCCCACGTTAGCTACGATTACCCACCAGGTGCAA AAAACGACGCGCATTCCCCCCCAAATTAATCCAAAAAAAAAAAAAAAAAA GGCAACATCAAATCCTTTTTTCGCTTTATATTAATTTTTATTTTGTTTTT TTGCTAAGATTTTAGATATCTTATGGAAAGAAAACTTAATTCGTGCAAGA GACAACCGAGAGTATCTCCATGTTCCTTGTCCAGTCACCGTTCCCCCCTA CCCCAGCCCCTCCTCTGGTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT CCTCTACGAAGTCAACGATTTCTCCTCCTCCCTGTCCCGTTTGTACCGCT GCTCGCAGAAAATATCCGTCGTGATGTGTGTGCGTGTGGTATGTTTTCGT TGGCGTTTTTTTGTTCTTCTCCGGGGGGAATAAACCCCCGGAGTAGTGTC AACAACAACAAAAACTCTTTTTCGATTTACCCCCGGGGTTGTGTGCGTTC ATACAAAAAACGATCTCCCCTCCGGGGCTATGGCAGCGCAATTTACGGTA TACTTGTGCTGGTGGTGTGGGTGTGTACGTGTGGTTCGCATGCTGCGTCA TGTGATGTGTGATATGAGAGCGAGAGCATAACCGATTTCGTAAATGCAAC AGCCCAGCAGGAGCGACAGCGGCGGCAGTAGCTGCAGCAGGCTGCCGGAG ACGAAGCGTAGCGCTATAACCCTGCTGCTGTTGTGCCACCCCACGTGGGT GGCCATTTCGGTTGTTCATGTTGTCGTCCCGATGTGCCGACTAACCCAGG TGCGCACAAACCAGGCGTCTCAATGATCGCTTTTTGTGATCGCCATAACC CCCCTTGAAGTCCCAGAAGGGTTAATTGCAACGACAATGCCACCGCCGTT TATATGTACAATATGTTTGTATTTCCTTGATTTTTTTCCAGGAGCGTAAG GGGATGGAGGGGAGCCTTTTCATCGTCCGACGAAGCTCCCATCCACACTT CAAGGTGAGGAGGCACCGCCCCAATGGTTGCCTCGCCCTGTGGCGATCGT TCCACGTATTTCTGTCCACCGCGGTGCTGCTGTTGCGTGCTCGGGTATGC TCCTAGTGATGGTTTGCTTTTTGCTTCGGCAGCCGCGAGCGACGGCTGCT TCACACGGTGGAGATTTGAAAAGCATATAAATATCGATGTATACCAGTAG CAGCTCTTAGATATAGCTCTTTTCCGACCGCAGTGTCCGCGCTGCCACCG CCCTCTCCCGTCGCTATCTCGTCGCCTTTGCCCATGGATCATGCCATACC TCTCCTCTCCTCCTCGCCACCCGCCTTTCGCTCGAAATCACGGGGGGCCA GAACCATGCGCAAGCAGAACTGCTGTGTGAGCTTTCCACCGGCAGTTGTA ACCCCAGCTGTACCCCTCTCGTATCCGTATTGTACCTTATTTCAGTTTTT TTGTGTCTACTCGCCCGCCTCTCCATCTCCCCCCCCACCCCACGCGACGA ACCGCGCTGTAGATGATGGTCCTCAACAGACTGGGCTTCGACCACATGTC GCAGGGGATCACCCAGTCGTTCAAGGTGCACCGGCTGGAGGACTACCTCA TGTTCTCGTGCAAGACGCCGTGCTACTTCGGGGAGAACCCGTCGCCGAGC GGGCACCTGCACGGGGTGTGGTTCCACAACCCGGAAGAGCGCGACAGGAT GCAGGCCTTGCTTGAGCGGTGAGATAGGGGCGCGGGGTAGAAGGAAATAC TGACTGTTTAGTGTACTGTCTTCTTATTCTGCTTTTATGTTTTTTTTCGT TGTTGTTTTTTGGATCGGGAGGAGAGGGGGGGGGGGTCGAGTGTGCGTGC ACTTGAAAACTGCTGCCACGCCTAGCCGTGCGCATGTACATCCTCAAGTT GGGGAGTTTGTTCGATTTGGTCCTTGCACAGCCTTAGTGCATACGGAGTA TATATATACGTTGGAACGGGGTTCGTGAGTTTTTGTAAATTCACAGGAGG CATTGCGTTATTTTCTTGTCCGTTTTCTTTGAATCGTCTCCTGGAGATCA CGACAGCTGTGCAATACTTTGTAGCCACCGCACAGTTTCCTTACTCGAAC CGCCTTTGGCCACTTTCCGTCGACGACGCTTCTGCGTCCGTAGGATAATG CAGATTCACGCCGCGAACAGCAGCGGGAGCGGCAACGGCCACGGAGGTGG TGGTGGTAGTGCCAGTCCGGCGCCTGCCTCGTCGTCTGCGCCCTCATCGC AGGCTGCCGCTGAAGCTCCCGATCAACACCAGCGGCCACAACACCAGCAG CCACAACACCAGCAGCAGCGGCAGCAGCAGCAGCAACAACAACAACAACA ACAACAGAGGGTGTTGACCACTCCAACAAACACCCGATATCCACAGCCTG CCCCGCCACCCGTGTATCAACCAGGGTACCAGCAGCAGCAGCAGGTGCAC CAGCATAACACTGCACAGACCCCGCCGGTGACAGCGGCGGCTGCTGCCGT ACCGGCTAAGTCTCGCCCGCAAGAAATGGCTGATCGAGCGGGCGGCGTTG TCGACGAGAGGTCTTCGCCCTCAGCAGCGCCCCCAGTGGCGGTGGCGCCG GATACAGCGGCCTCCTTGGGTGGCAGGACGAGCGCAGAAGCGGTGAGATG TTTTGTTGGCTGCCCCGTCTTTGTGGTGGTGTCCCGTACGCGCGCGCGCA GTGCACGGAAATGTAGAGTATTTACGCAGTAGAAGCGCAAAAAATAGGTC TGCGTCACGAGGTCATGGGGGGGTTGGGCGACGGTCACCTTGGCAGCTAG CTCAACACACAGGCGGTTATTATTTTTATTATTTTGACGATCCTGAAACC GCCCACCCTCGCCAAGCGGGAGGGGCACGTGGACCCTCGCTGGCAGGGTC GGCGCCAGATCGACGCTTTTCGTACATGTGGGGGGGGCGCGGGCGCCTTT CGAAATCACCGTCTGTCCCATGTATTTACGGGGGAACGCGCTGTTGGCGA CTGTCCATTGTGTGCACACGGATATCTGACGGGGGCCATGGCGCGAGTCT GTCGTGCACCCTATCGCTGTTTATGTGAGACGCGCTCGGGTCGGGTCGCG ATCTTATGACAGCGGTGGATTGAGAGTAGAAGAGGCGGACGGTTCTTGTT GGGGAGTTGTGGACCTCGAGCTTCGAGGTTCTACCGCTGATGATCGCGCC GGCTCCAGTCAGTACAGGACAATCGCGGAAACGGCGGGGTCGCGTTTGTG CCGTGTGCGGCGGAGTAGGCGGCGGTACAAGTCGTTTATCCGCGAGGAGA ATGTGAAAAGCAAGGTAGCCAAGATGATGATTTCATGAACACGGGTATGT ACACAAATTGTGTACTTCCTTTCTCGCAACGCTTGCTTTGTCTTCACCCC TATTTGTGTATTTGCCGCGCTGCCTCCACTGCGTTCTCCTCCCCTGGTCG GCCAAAATCATACCAGACTTCAGCTGCTACAGAAATTCTGGTGGCAGCGC TGGGTATGTCCCCGTCGTCGATGTCGCCAGCGCCAGTGCAGCAGCCCCAG CAGCGACATCGGCAGCGACCGCAGCAGCAGCAGCAGCAGCAGCAGGCTAC TGGTGAAAGCGGCGGCACCCTCCGTACTCGAACCGCCCTCCCCCGACCGC CTCCCGCCGCGGACGCCTCCTCCGCTGCCCGCACAACGAAAGGCACAACC GTAAAGGCCACCACCACCACCGCCGCCGCCGCCGCCGCTGCGACAACCAC AACCTCGCGCTTGCGGGCGCCGCCTCTGTCCGCCGCTGCAACCGCCGCCG CGCGCGAAGCGAGCATGCTCCTTACGCCCTCTCAGCTCCTTTTGTCGGCA GAGAGCAACAGCAGCGGCAGCCGTTCTTCTTCGGCGGCAAGCCAGCGTGG GGGTGACACCGCGGGCAGCAGCACGGCAGGCGACGGCCGGACGGCGGCGG TGGCGGCGGCGGCAGCGGGGGGGGGGGCAGGGACGGTGGCGAGAGACGTC AAGGTTTCGAGCTCGGCCAAGGTGTCGGCCGGAAGCTTGGACACGCGCGC GCGGGGGAGCGAACCAAGGGATGATGGACCGAGGGATGGCGGCGATCGTG GCGGTAATGGGCGCGGCGCCACCGTGGGTAGGCGGCGAACAGACAAGGAG TCCGCTGTGTCGAGTGGGAAAACAAATGGGCCAGTAGCTGGTGCTGCTGT TGCTACTGCTGCGACCGAAGGAGGCAGCGTTCGCCGCGGCAGCACTCCAA GTCAGGGAGAAGCGGCGGCGGCGGCAGCGGCGGCCGTGGGGGGCGGGGCC AGCGGTGGGAGTGGGGGGCAACCGGTCGCCGGCCTGCTGGACAAGCGGGC GTTGCAGATCACTCTCATGTCGCTGGTAGAAGACGACCGGTTCGTTGATA TGCTGCACGCTCGCTACGTCGCGCTCATGAAGAGGCGATCGACCCGATGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7275:1517..8066-

>mRNA_L-elsbetiae_contig7275.16141.1 ID=mRNA_L-elsbetiae_contig7275.16141.1|Name=mRNA_L-elsbetiae_contig7275.16141.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3738bp|location=Sequence derived from alignment at L-elsbetiae_contig7275:1517..8066- (Laminarionema elsbetiae ELsaHSoW15)
ATGCATGTTCTTTCCATTCGTGTCACGACTCAGAAAAAGGACGAGCATGT
GACAGAGGTGATTGGCCACAGCAGCCACGTCACCATCTATGCGTTGGACG
TCAGCACCAAGTCTTGGATGCATGTTCTTTCCATTCGTGTCACGACTCAG
AAAAAGGACGAGCATGTGACAGAGGTGATTGGCCACAGCAGCCACGTCAC
CATCTATGCGTTGGACGTCAGCACCAAGTCTTGGGAGCGTAAGGGGATGG
AGGGGAGCCTTTTCATCGTCCGACGAAGCTCCCATCCACACTTCAAGGAG
CGTAAGGGGATGGAGGGGAGCCTTTTCATCGTCCGACGAAGCTCCCATCC
ACACTTCAAGATGATGGTCCTCAACAGACTGGGCTTCGACCACATGTCGC
AGGGGATCACCCAGTCGTTCAAGGTGCACCGGCTGGAGGACTACCTCATG
TTCTCGTGCAAGACGCCGTGCTACTTCGGGGAGAACCCGTCGCCGAGCGG
GCACCTGCACGGGGTGTGGTTCCACAACCCGGAAGAGCGCGACAGGATGC
AGGCCTTGCTTGAGCGATGATGGTCCTCAACAGACTGGGCTTCGACCACA
TGTCGCAGGGGATCACCCAGTCGTTCAAGGTGCACCGGCTGGAGGACTAC
CTCATGTTCTCGTGCAAGACGCCGTGCTACTTCGGGGAGAACCCGTCGCC
GAGCGGGCACCTGCACGGGGTGTGGTTCCACAACCCGGAAGAGCGCGACA
GGATGCAGGCCTTGCTTGAGCGGATAATGCAGATTCACGCCGCGAACAGC
AGCGGGAGCGGCAACGGCCACGGAGGTGGTGGTGGTAGTGCCAGTCCGGC
GCCTGCCTCGTCGTCTGCGCCCTCATCGCAGGCTGCCGCTGAAGCTCCCG
ATCAACACCAGCGGCCACAACACCAGCAGCCACAACACCAGCAGCAGCGG
CAGCAGCAGCAGCAACAACAACAACAACAACAACAGAGGGTGTTGACCAC
TCCAACAAACACCCGATATCCACAGCCTGCCCCGCCACCCGTGTATCAAC
CAGGGTACCAGCAGCAGCAGCAGGTGCACCAGCATAACACTGCACAGACC
CCGCCGGTGACAGCGGCGGCTGCTGCCGTACCGGCTAAGTCTCGCCCGCA
AGAAATGGCTGATCGAGCGGGCGGCGTTGTCGACGAGAGGTCTTCGCCCT
CAGCAGCGCCCCCAGTGGCGGTGGCGCCGGATACAGCGGCCTCCTTGGGT
GGCAGGACGAGCGCAGAAGCGGATAATGCAGATTCACGCCGCGAACAGCA
GCGGGAGCGGCAACGGCCACGGAGGTGGTGGTGGTAGTGCCAGTCCGGCG
CCTGCCTCGTCGTCTGCGCCCTCATCGCAGGCTGCCGCTGAAGCTCCCGA
TCAACACCAGCGGCCACAACACCAGCAGCCACAACACCAGCAGCAGCGGC
AGCAGCAGCAGCAACAACAACAACAACAACAACAGAGGGTGTTGACCACT
CCAACAAACACCCGATATCCACAGCCTGCCCCGCCACCCGTGTATCAACC
AGGGTACCAGCAGCAGCAGCAGGTGCACCAGCATAACACTGCACAGACCC
CGCCGGTGACAGCGGCGGCTGCTGCCGTACCGGCTAAGTCTCGCCCGCAA
GAAATGGCTGATCGAGCGGGCGGCGTTGTCGACGAGAGGTCTTCGCCCTC
AGCAGCGCCCCCAGTGGCGGTGGCGCCGGATACAGCGGCCTCCTTGGGTG
GCAGGACGAGCGCAGAAGCGACTTCAGCTGCTACAGAAATTCTGGTGGCA
GCGCTGGGTATGTCCCCGTCGTCGATGTCGCCAGCGCCAGTGCAGCAGCC
CCAGCAGCGACATCGGCAGCGACCGCAGCAGCAGCAGCAGCAGCAGCAGG
CTACTGGTGAAAGCGGCGGCACCCTCCGTACTCGAACCGCCCTCCCCCGA
CCGCCTCCCGCCGCGGACGCCTCCTCCGCTGCCCGCACAACGAAAGGCAC
AACCGTAAAGGCCACCACCACCACCGCCGCCGCCGCCGCCGCTGCGACAA
CCACAACCTCGCGCTTGCGGGCGCCGCCTCTGTCCGCCGCTGCAACCGCC
GCCGCGCGCGAAGCGAGCATGCTCCTTACGCCCTCTCAGCTCCTTTTGTC
GGCAGAGAGCAACAGCAGCGGCAGCCGTTCTTCTTCGGCGGCAAGCCAGC
GTGGGGGTGACACCGCGGGCAGCAGCACGGCAGGCGACGGCCGGACGGCG
GCGGTGGCGGCGGCGGCAGCGGGGGGGGGGGCAGGGACGGTGGCGAGAGA
CGTCAAGGTTTCGAGCTCGGCCAAGGTGTCGGCCGGAAGCTTGGACACGC
GCGCGCGGGGGAGCGAACCAAGGGATGATGGACCGAGGGATGGCGGCGAT
CGTGGCGGTAATGGGCGCGGCGCCACCGTGGGTAGGCGGCGAACAGACAA
GGAGTCCGCTGTGTCGAGTGGGAAAACAAATGGGCCAGTAGCTGGTGCTG
CTGTTGCTACTGCTGCGACCGAAGGAGGCAGCGTTCGCCGCGGCAGCACT
CCAAGTCAGGGAGAAGCGGCGGCGGCGGCAGCGGCGGCCGTGGGGGGCGG
GGCCAGCGGTGGGAGTGGGGGGCAACCGGTCGCCGGCCTGCTGGACAAGC
GGGCGTTGCAGATCACTCTCATGTCGCTGGTAGAAGACGACCGGTTCGTT
GATATGCTGCACGCTCGCTACGTCGCGCTCATGAAGAGGCGATCGACCCG
ATGAACTTCAGCTGCTACAGAAATTCTGGTGGCAGCGCTGGGTATGTCCC
CGTCGTCGATGTCGCCAGCGCCAGTGCAGCAGCCCCAGCAGCGACATCGG
CAGCGACCGCAGCAGCAGCAGCAGCAGCAGCAGGCTACTGGTGAAAGCGG
CGGCACCCTCCGTACTCGAACCGCCCTCCCCCGACCGCCTCCCGCCGCGG
ACGCCTCCTCCGCTGCCCGCACAACGAAAGGCACAACCGTAAAGGCCACC
ACCACCACCGCCGCCGCCGCCGCCGCTGCGACAACCACAACCTCGCGCTT
GCGGGCGCCGCCTCTGTCCGCCGCTGCAACCGCCGCCGCGCGCGAAGCGA
GCATGCTCCTTACGCCCTCTCAGCTCCTTTTGTCGGCAGAGAGCAACAGC
AGCGGCAGCCGTTCTTCTTCGGCGGCAAGCCAGCGTGGGGGTGACACCGC
GGGCAGCAGCACGGCAGGCGACGGCCGGACGGCGGCGGTGGCGGCGGCGG
CAGCGGGGGGGGGGGCAGGGACGGTGGCGAGAGACGTCAAGGTTTCGAGC
TCGGCCAAGGTGTCGGCCGGAAGCTTGGACACGCGCGCGCGGGGGAGCGA
ACCAAGGGATGATGGACCGAGGGATGGCGGCGATCGTGGCGGTAATGGGC
GCGGCGCCACCGTGGGTAGGCGGCGAACAGACAAGGAGTCCGCTGTGTCG
AGTGGGAAAACAAATGGGCCAGTAGCTGGTGCTGCTGTTGCTACTGCTGC
GACCGAAGGAGGCAGCGTTCGCCGCGGCAGCACTCCAAGTCAGGGAGAAG
CGGCGGCGGCGGCAGCGGCGGCCGTGGGGGGCGGGGCCAGCGGTGGGAGT
GGGGGGCAACCGGTCGCCGGCCTGCTGGACAAGCGGGCGTTGCAGATCAC
TCTCATGTCGCTGGTAGAAGACGACCGGTTCGTTGATATGCTGCACGCTC
GCTACGTCGCGCTCATGAAGAGGCGATCGACCCGATGA
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