prot_L-elsbetiae_contig7255.16121.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7255.16121.1
Unique Nameprot_L-elsbetiae_contig7255.16121.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length351
Homology
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BLAST of mRNA_L-elsbetiae_contig7255.16121.1 vs. uniprot
Match: D7G4L9_ECTSI (Cellulosome anchoring protein, cohesin region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L9_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 5.730e-25
Identity = 60/109 (55.05%), Postives = 73/109 (66.97%), Query Frame = 0 
Query:  250 VVADEVAGDEIDCYSLLSEEMKVYLEQEDKGLFYDEDCTGTHCNMFGVAQDCRSCYMDCTVCE---EEPGSV---MCPSEFPMISGEAQSCASACGIEDATA-NRRLRG 351
            VVADE   +E+DC SLLS EM   L Q+DKG++Y++DC G HCNMFG+  DCR+CYMDC  CE   E+ G+    MCPSEFP I G+ Q+C S C     T   RRLRG
Sbjct: 2253 VVADEEV-EEVDCVSLLSPEMSTELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGTADLAMCPSEFPRIGGQTQTCISTCSATRKTRYRRRLRG 2360
[Close]
BLAST of mRNA_L-elsbetiae_contig7255.16121.1 vs. uniprot
Match: A0A6H5KK76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK76_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.260e-15
Identity = 39/63 (61.90%), Postives = 49/63 (77.78%), Query Frame = 0 
Query:  250 VVADEVAGDEIDCYSLLSEEMKVYLEQEDKGLFYDEDCTGTHCNMFGVAQDCRSCYMDCTVCE 312
            VVADE   +E+DC SLLS EM + L Q+DKG++Y++DC G HCNMFG+  DCR+CYMDC  CE
Sbjct: 3572 VVADEDE-EEVDCVSLLSPEMLMELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACE 3633
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7255.16121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L9_ECTSI5.730e-2555.05Cellulosome anchoring protein, cohesin region n=1 ... [more]
A0A6H5KK76_9PHAE5.260e-1561.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 43..64
score: 35.45
coord: 65..81
score: 36.47
coord: 4..20
score: 44.71
coord: 31..43
score: 36.92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7255contigL-elsbetiae_contig7255:7722..10023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7255.16121.1mRNA_L-elsbetiae_contig7255.16121.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7255 7722..10051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7255.16121.1 ID=prot_L-elsbetiae_contig7255.16121.1|Name=mRNA_L-elsbetiae_contig7255.16121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
MPMPTTPGATPSAPSPTGTPAPADTVAPDPPLSPDSMPTPTTPGATPSAP
SPSPPTAEGQPTSVPTSAPTPSPSQPTTPGDTPSSPSSPAATPTPPTAPS
GTEPPSVRIDPDITPDITPDITPPSPPSVPTTPAPQDSPAGTEPPATAPA
PTVPAPSPPSPAATLAPQTSPAGTGEEELGTAAPATEAFMCPPPVPCVCD
APTPAPTSEDSMIEPSSSFSFSFDPLPQPTSASASSEPAVGEFESSGFEV
VADEVAGDEIDCYSLLSEEMKVYLEQEDKGLFYDEDCTGTHCNMFGVAQD
CRSCYMDCTVCEEEPGSVMCPSEFPMISGEAQSCASACGIEDATANRRLR
G
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