mRNA_L-elsbetiae_contig7251.16117.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7251.16117.1
Unique NamemRNA_L-elsbetiae_contig7251.16117.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: D7FMF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF7_ECTSI)

HSP 1 Score: 565 bits (1456), Expect = 1.960e-194
Identity = 306/386 (79.27%), Postives = 323/386 (83.68%), Query Frame = 1 
Query:    1 AEPSPVRGGXXXXXXXGLSGEVSLKELHVFCRAVRISVVDGGLGEVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGNKCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRVMWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG 1158
            A PSPV+ G         S E+SL+ELHVFCRAVR+SVVDG  GEVVLGSLEGMSM+VAATEAEVEVKFKLGSLQID+H+PGTSFPVLLQPV+PG    G NKCVRFTLVAAPRVKNV YIKLASL+VEEFDLRLDEGMVRWAQGLADRVMWTLVAD+R DEM +WPLP+EAFCS QAG   G +    + D  S  G  G +                  G FASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHN TTTRSRL +TAREHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQ GMQDFVKEPVLGLLKSVED APEELMHGMARGAGSLLNHSVGGVANS SLITG
Sbjct:   70 ASPSPVQEGGDSAS----SEEISLRELHVFCRAVRVSVVDGDRGEVVLGSLEGMSMNVAATEAEVEVKFKLGSLQIDNHLPGTSFPVLLQPVRPG-YQGGDNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPQEAFCSSQAGHPGGGKASGENIDGSSVGGGQGSTG--------MVVSRGGGEGAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQ-GMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 441
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 563 bits (1451), Expect = 2.820e-189
Identity = 307/386 (79.53%), Postives = 323/386 (83.68%), Query Frame = 1 
Query:    1 AEPSPVRGGXXXXXXXGLSGEVSLKELHVFCRAVRISVVDGGLGEVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGNKCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRVMWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG 1158
            A P PV+ G         S EVSL+ELHVFCRAVR+SVVDG  GEVVLGSLEGMSM+VAATEAEVEVKF+LGSLQID+H+PGTSFPVLLQPV+PG    G NKCVRFTLVAAPRVKNV YIKLASL+VEEFDLRLDEGMVRWAQGLADRVMWTLVAD+R DEM +WPLP EAFCS QAG   G +    + D     GS GG   +T              G FASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHN TTTRSRL +TAREHYERELKQQAFLMLGSLEAFGNPVGL+RGMGQ GMQDFVKEPVLGLLKSVED APEELMHGMARGAGSLLNHSVGGVANS SLITG
Sbjct:  423 ASPFPVQAGGDSAS----SEEVSLRELHVFCRAVRVSVVDGDRGEVVLGSLEGMSMNVAATEAEVEVKFELGSLQIDNHLPGTSFPVLLQPVRPG-YQGGNNKCVRFTLVAAPRVKNVAYIKLASLNVEEFDLRLDEGMVRWAQGLADRVMWTLVADRRADEMDKWPLPREAFCSSQAGHPGGGKPSGENADG----GSVGGGQGTTAMVVSRGGSE----GAFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNTTTTRSRLTLTAREHYERELKQQAFLMLGSLEAFGNPVGLVRGMGQ-GMQDFVKEPVLGLLKSVEDLAPEELMHGMARGAGSLLNHSVGGVANSVSLITG 794
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A836C849_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C849_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.850e-58
Identity = 151/401 (37.66%), Postives = 205/401 (51.12%), Query Frame = 1 
Query:   91 CRAVRISVVDGGLG-EVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGNK----CVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRVMWTLVADKRV--------------DEM--ARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQ----------------------VSSVKVRLSLQRAKDSFDNVY--VGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG 1158
            C+ + +SV+D   G E+VL      S++  +   E++++ ++G LQID+H+P T FPVLLQPV+  D   GG K    C R  +  AP V N+ Y K  SL +   +LRL+E +V WAQ  AD+V   L  +                 DE   A W LP     +PQ  + +                +A G++S                    +RYVY  +                        +++ +VRLSLQR     + V     +   QM+LD MMRMDSAHI L S I+HN T    +L   A  HY   +KQ   LMLG+LEAFGNPVGL RG+ Q G+QDF+ EPVLGL++SVE+  PEE   G+ARG GSLL H+VGG+ANS S+I G
Sbjct: 5073 CKDIHVSVIDEAEGGEMVLA--RDASVNYFSCPTELQLQVQVGHLQIDNHLPRTPFPVLLQPVERCDDGGGGGKGGQHCARLMVRVAPHVANIVYCKALSLKLSPLELRLEESIVLWAQRFADKVRRYLQTEAAXXXXXXXXXXXXXXXDEASDAAWELPHTVLGAPQMPQQA--------------AAAAPGASS-----------------PLWARYVYFHILATXXXXXXXXXXXXXXXXXXXXXIAAFQVRLSLQRPTQGAEEVRRAPALTVTQMVLDAMMRMDSAHINLASFIMHNETIATQQLGAIAAAHYLSTVKQHVLLMLGALEAFGNPVGLFRGVSQ-GVQDFISEPVLGLVRSVEELRPEEFFAGIARGGGSLLKHTVGGMANSASMIAG 5439
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S1XZQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZQ2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.150e-22
Identity = 64/170 (37.65%), Postives = 95/170 (55.88%), Query Frame = 1 
Query:  664 GTFASRYVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKP------GQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            G  A+   Y E+ Q+  V+   S + +K    +                L+D++ RM+ A I+LK  +V +       L +   +HYERE+++    M+G+L   GNPVGL+R + ++G +DFV EP+ GLL SVE   P  L+ GM +G  SLL +SVGGVANS SL+T
Sbjct:    9 GGAAAGLKYFELLQIDRVRFWASFKNSKSGAADAAAATAAQPKSTLASTLMDIVGRMEEARIRLKPFVVKDFFGVADGLSVQLYQHYEREIRRHFLEMIGALHLLGNPVGLMRSL-REGAKDFVAEPMHGLLASVEQAKPAHLVKGMRKGTTSLLRNSVGGVANSASLLT 177
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2F4H5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4H5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.610e-22
Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = 1 
Query:  682 YVYLEVFQVSSVKVRLSLQRAKDSFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            + Y+E   V +++ R+S+ R ++S  +VYVG KP ++LLD++ R+DSA   L+ L+V +       L      HY   ++Q     +GSLEA GNPVGL+RG   QG  D V EP+ GL+++VE                    H+VGGVANS + IT
Sbjct:   71 WTYVEELVVDTIRARVSVSRPRESAADVYVGFKPARLLLDVLQRIDSARFSLEPLMVRHRLIGPGELPAVVVRHYTSSVRQHLLSTVGSLEALGNPVGLVRGF-MQGASDAVAEPLEGLVRTVETAXXXXXXXXXXXXXXXXXTHTVGGVANSAAQIT 227
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7R9UE31_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE31_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.050e-21
Identity = 101/371 (27.22%), Postives = 157/371 (42.32%), Query Frame = 1 
Query:   79 LHVFCRAVRISVVDGGLGEVVLGSLEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRGGN-------KCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADR--VMWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSAGGSASSTRXXXXXXXXXXXXXGTFASRYVYLEVFQVSSVKVRLSLQRAK-DSFDNVYVGVKPG--QMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            L V    + IS+VD    E+ L +L  +   +     E     + G LQ+D+ +P +SFPV+   V   D S  G        K     L      ++  +++  S ++ E ++R+D   V  A     R  ++W                  +AF S                        AG SA S                  ++   Y E+ Q   +++ +S +    D        V P     L+D++ R+D A I+LK L+V +       L     +HYERE ++    ++G+L   GNP+GL+R   + G +DFV EP+LGL+ S+E   P  L+ G  RG  SLL +SVGGV NS SL+T
Sbjct:  549 LTVQVPTLHISIVDNVPREIALVTLSKVRYEMITNAEESRTSIRAGDLQVDNFLPFSSFPVM---VALRDRSAEGRQPTSRAFKIALGVLRGGSSPQSYVHVRQLSFTMAELEVRVDSVAVSTALEFLKRQSLVWA-----------------DAFPS------------------------AGESAKSE-----------------SADLNYFELLQADRLRMSVSYKNTSADRLRRTSRKVIPALTSALIDMVGRLDGARIRLKPLVVKDFFGPLDFLSEQVSQHYEREARRHVLELIGALHLLGNPIGLMRSF-RDGAKDFVAEPMLGLMDSIEQAKPAALVKGFKRGTTSLLKNSVGGVVNSASLLT 857
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7R9WT54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WT54_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.480e-20
Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1 
Query:  823 AHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            A +    + + N  +T  +L      HY   L+Q    +LGSL AFGNP+GL+RG+G+ GM DFV EPV GL KSV++  P  L  G+ARG GSL  H+VGG A+S SL+T
Sbjct:    1 ASLNFAGISLRNHISTTPQLSTYLLTHYMASLRQNVPALLGSLAAFGNPLGLIRGVGE-GMADFVSEPVKGLQKSVQELDPGYLFDGVARGTGSLARHTVGGFADSASLLT 110
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2LN01_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LN01_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.770e-18
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 1 
Query:  793 LLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            ++D ++R + A +    + + N  T   ++      HY   L+     +LGSL AFGNP+GL+RG+G  G+ DFV EP+ GL KS+E+  P  ++ G+ARG GSL  H++GGVA+S SL+T
Sbjct:  281 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGD-GVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 400
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2PQX2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PQX2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.920e-18
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 1 
Query:  793 LLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            ++D ++R + A +    + + N  T   ++      HY   L+     +LGSL AFGNP+GL+RG+G  G+ DFV EP+ GL KS+E+  P  ++ G+ARG GSL  H++GGVA+S SL+T
Sbjct:  492 IVDALLRCEEASLAFPGIGIRNYLTNSPQVTTYLLAHYLAALRSNVPSLLGSLAAFGNPLGLIRGLGD-GVSDFVSEPIKGLKKSLEELDPTFVIDGVARGTGSLARHTIGGVADSASLLT 611
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BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Match: A0A7S2U5Y0_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5Y0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 8.030e-18
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 1 
Query:  793 LLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITAREHYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSVEDQAPEELMHGMARGAGSLLNHSVGGVANSFSLIT 1155
            L+D ++R D A +    + V N  +T  +++     HY   L+     +LGSL AFGNP+GL+RG+G  G+ DFV EPV GL +SV++  P  ++ G+ARG  SL  H++GG A+S SL+T
Sbjct:  112 LVDALLRCDGASLSFSGVGVRNHISTMPQVLTYLGAHYLDSLRSNVPALLGSLAAFGNPIGLIRGLGD-GVSDFVSEPVKGLKRSVKELDPSFVVDGVARGTESLARHTLGGFADSASLLT 231
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7251.16117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMF7_ECTSI1.960e-19479.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXT8_9PHAE2.820e-18979.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C849_9STRA1.850e-5837.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XZQ2_9STRA1.150e-2237.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2F4H5_9STRA1.610e-2237.97Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7R9UE31_9STRA3.050e-2127.22Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7R9WT54_9STRA3.480e-2047.75Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S2LN01_9STRA6.770e-1841.32Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2PQX2_9STRA7.920e-1841.32Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2U5Y0_9STRA8.030e-1842.15Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7251contigL-elsbetiae_contig7251:416..6166 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score567.8
Seed ortholog evalue3.9e-159
Seed eggNOG ortholog2880.D7FMF7
KEGG koko:K19525
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
EggNOG OGsCOG5043@1,KOG1809@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionAutophagy-related, C-terminal
Ec32 orthologEc-05_000900.1
Exons7
Model size1158
Cds size1158
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816808.2348454-CDS-L-elsbetiae_contig7251:415..6601622816808.2348454-CDS-L-elsbetiae_contig7251:415..660Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 416..660 +
1691683829.0777493-CDS-L-elsbetiae_contig7251:415..6601691683829.0777493-CDS-L-elsbetiae_contig7251:415..660Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 416..660 +
1622816808.2517047-CDS-L-elsbetiae_contig7251:1232..13531622816808.2517047-CDS-L-elsbetiae_contig7251:1232..1353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 1233..1353 +
1691683829.0905075-CDS-L-elsbetiae_contig7251:1232..13531691683829.0905075-CDS-L-elsbetiae_contig7251:1232..1353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 1233..1353 +
1622816808.263061-CDS-L-elsbetiae_contig7251:2652..28171622816808.263061-CDS-L-elsbetiae_contig7251:2652..2817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 2653..2817 +
1691683829.1003673-CDS-L-elsbetiae_contig7251:2652..28171691683829.1003673-CDS-L-elsbetiae_contig7251:2652..2817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 2653..2817 +
1622816808.2751408-CDS-L-elsbetiae_contig7251:3560..37341622816808.2751408-CDS-L-elsbetiae_contig7251:3560..3734Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 3561..3734 +
1691683829.110773-CDS-L-elsbetiae_contig7251:3560..37341691683829.110773-CDS-L-elsbetiae_contig7251:3560..3734Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 3561..3734 +
1622816808.2858605-CDS-L-elsbetiae_contig7251:3962..40911622816808.2858605-CDS-L-elsbetiae_contig7251:3962..4091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 3963..4091 +
1691683829.1256933-CDS-L-elsbetiae_contig7251:3962..40911691683829.1256933-CDS-L-elsbetiae_contig7251:3962..4091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 3963..4091 +
1622816808.295801-CDS-L-elsbetiae_contig7251:4633..47951622816808.295801-CDS-L-elsbetiae_contig7251:4633..4795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 4634..4795 +
1691683829.1400883-CDS-L-elsbetiae_contig7251:4633..47951691683829.1400883-CDS-L-elsbetiae_contig7251:4633..4795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 4634..4795 +
1622816808.3097773-CDS-L-elsbetiae_contig7251:6004..61661622816808.3097773-CDS-L-elsbetiae_contig7251:6004..6166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 6005..6166 +
1691683829.1505578-CDS-L-elsbetiae_contig7251:6004..61661691683829.1505578-CDS-L-elsbetiae_contig7251:6004..6166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7251 6005..6166 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7251.16117.1prot_L-elsbetiae_contig7251.16117.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7251 416..6166 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7251.16117.1

>prot_L-elsbetiae_contig7251.16117.1 ID=prot_L-elsbetiae_contig7251.16117.1|Name=mRNA_L-elsbetiae_contig7251.16117.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=386bp
AEPSPVRGGGGGAGGGGLSGEVSLKELHVFCRAVRISVVDGGLGEVVLGS
LEGMSMSVAATEAEVEVKFKLGSLQIDSHMPGTSFPVLLQPVKPGDLSRG
GNKCVRFTLVAAPRVKNVTYIKLASLSVEEFDLRLDEGMVRWAQGLADRV
MWTLVADKRVDEMARWPLPEEAFCSPQAGRLSGERLGQSDEDHCSPTGSA
GGSASSTRTRRGVSRGRGRGEGTFASRYVYLEVFQVSSVKVRLSLQRAKD
SFDNVYVGVKPGQMLLDLMMRMDSAHIKLKSLIVHNATTTRSRLIITARE
HYERELKQQAFLMLGSLEAFGNPVGLLRGMGQQGMQDFVKEPVLGLLKSV
EDQAPEELMHGMARGAGSLLNHSVGGVANSFSLITG
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mRNA from alignment at L-elsbetiae_contig7251:416..6166+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7251.16117.1 ID=mRNA_L-elsbetiae_contig7251.16117.1|Name=mRNA_L-elsbetiae_contig7251.16117.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5751bp|location=Sequence derived from alignment at L-elsbetiae_contig7251:416..6166+ (Laminarionema elsbetiae ELsaHSoW15)
GCCGAGCCTTCTCCCGTCCGAGGAGGGGGGGGGGGCGCGGGGGGGGGCGG
GTTGTCCGGGGAGGTTTCTCTGAAGGAGTTGCACGTGTTCTGTAGGGCCG
TTCGGATTTCGGTCGTAGACGGGGGCCTGGGAGAGGTGGTGCTGGGGTCC
CTGGAGGGAATGTCGATGAGCGTCGCGGCGACGGAGGCGGAGGTGGAGGT
GAAGTTCAAGCTCGGCAGCCTGCAGATCGACAGCCACATGCCGGGGTGAG
GGAGGGAGGGAGGGGGACAGGAGCACGCTTCTGTGCGTCTCTTCTTGTTT
GCTGTTGAGGATGTGTTGTTGTTGATGGTGGTAGTTGTTGTTGTTGCTGG
TGCTGGTGCTGGTACTGGTGCTGGGGGTGGGGGTAGGGGTGAGAAGGGCA
TGCACATATATATATCTCTAGTTTATTGTCAATTGGTGTTGGTGTTGTTG
CTGGTGCTGGTGCTGGTGCTGGTGCTGGTGTTGGTGTTGGTGCTGGTGCT
GCTGGCGGTGCTGCTGCTGCGGCTGGTGTTGTTGCTGCTGTTCCTCGTCT
CATGGAGTTACCGTTCCAAGTAGCGAGCCGCGAGTTCCGCGGCGAAAGTG
AAGGCTTGTGCTAGGCCGCTTTTTCCGGCGTTGCTGCACCTGCATTGCCC
TCGAATCTTTGAAGCGCATGTGTTTCTTATGGTTGTGTGGAGACACAAAC
AGCAGCAAATGAACCACAAACCGATTATCGCAGGTGCAAATCATCGCGTG
TGTACCTTTTTTTTTTTTTTTTAATAAAGTCGGTACATATATAAAATATC
ACTCTTTTTTTTTTCAGGACCTCGTTTCCCGTGCTGCTCCAGCCCGTGAA
GCCTGGCGACCTTAGCAGAGGAGGGAACAAGTGCGTCCGCTTCACGCTTG
TGGCGGCCCCCCGCGTCAAGAACGTCACCTACATCAAGGTGAGAACCGAC
TTGTTGCTGGCGGCCCCACAGGCGGGCCAACTAACCCCGCCCATCCCCGC
CGCCCCGGAGTCACCGAATAGGTGACACCGTAGGGTGTGGGGGGTTTTCG
AGAAAGTACCGTAATATCCCTTGAGAACGCCCCGGGGTGTAAAATGTTTT
TGAACCCGATTTTCTCCGCAACGGAGAGGGTACGACTGACAAAAACGCTA
AATTTGGAAAGATCTCGACGAGATCCTTCCACGAGCAGGCACATCGCTCG
ACAACAGCAACCCACCCATTGCGGAGAAAATCGTCTTTGGAAATATTTTA
CAGCCCGGGGCGTTCTCAAGGGATATTGCGGTAAGCAAGCGCCCCCCTTT
TACCCCCTTTGGGTCCTTGGGACGGATTTGGGTTAACACGGCGTGAGTGC
TTCCAAATTGCTGGTTCTGATGTAGAAACTGGTTCTGATGTAGAATCAAC
CCTGTCTCTGTCTGTCCGCCACCCTGTCGTGCTCCTCAGCCAGCCCTGCT
CTGCGTTCTCTGTAGGCGGGCCAAAACCACTGGGCCGTTCTTTTTGATGA
CTGGTTCTGATTTAGAACCGTCTCTCCATCTTGTGCCTTTGCTTGGCGCC
TAGCGACTGGGCGGGTTGGTAGGTTTCCATCACCCAACGATGCATGCTTG
TGTGCGCCTCATACATACATACGCGCCTCGAGGAAATAGTATCTCCCGAG
TGTACCCTAAATTTACCCTCTGTTTTATAGTGCGAGCGGGACGCAAGACC
CCTCCGAGATTCGGTTTAGCATCGCCGGGCGCGTATGTATACCAGTTTTG
TTTCACTTTTCTTCAGCGGCCTCGAGAGGGCCCTGTTTTTGTGACCACGG
GCCCCCATGGATGTTTTTGGACTACATAGAGAGCCAATGTGAGAGCAACA
ACAACAACAACAACAGTATTTCCTCTTGCGCCCGCCCCGCCCCTGTGCGT
CATGCGTTACGTCGTGGCGTATATATGCCCCGGCGTATGTTGCCTTCGTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACT
GTATTTATACGTTTGAGCGTCTATACGCAGCCTGTAAAAAAAGGAGCCGT
TCCAAGGGGGTGGACTGTTATAGACGCACTATTTAGACAAACCCTCGCTC
ACCGCTCCTGGCCGCAGTCGGTGGTACAATGTTCTCAACACTTTGAAGCG
CCACGCGTTCGTTCCCTGCACGTGTTTTTCGTTTTTTTCTTGAAACGCCA
ACAATCACTCCCTGTCTCTTAATATGAAACATTGCAGCTGGCGAGTCTGA
GCGTGGAAGAGTTTGACCTGCGCCTGGACGAGGGGATGGTTAGGTGGGCG
CAAGGGCTGGCGGACCGCGTGATGTGGACCCTCGTTGCGGACAAGAGGGT
GGACGAGATGGCCAGGTGGCCCCTTCCCGAGGAGGCGTTTTGCTCACCGC
AGGTCCGTCTTGTTGACAGTCCCGTGTTGTGCATGATTAGTCTCGTGTGG
TACATGACAGTCCCGTGTTGTTGACAGCCCCAAGGGGGCGTTTTGCTCAC
CGTAGGTCCGTCTTGTTGACAGTCTCGCGTTGTTGACAGCCCCGAGGAGA
TGTTTTGCTCACCGCAGGTCCATCTTGTTGACAGTCTCGCGTTGTTGACA
GCCCCGAGGAGATGTTTTGCTCACCGCAGGTCCATCTTATTGACAGTCCC
GTGTTGTTGACAGCTTCAAACAGGTGCCGAGAGCCTGTAGTGTGTCCGTG
TGTCCGTTATTTGAGAAGGAGATATCGGTTTATCACGTGTGTTGAAGGTG
CAGAGCTCCAGAGAGCGAGAGCAAATAGGATTGGCAGCCCACACCAAACC
AAGGGAATTCACGCACAGTAGTCCTGTCTGCGTACTTATACATGCCAGAC
ATTGCTGTAGATCTAAACCGTCCATGTCCACACACAAACACACACGAACA
CGATCAAATGTTGTGTTCGTGTTTTTTTTTTATCCTCCCACTATTGGTTT
ATTCGTCGTCTGCCCCACTGGCCCCCATACTCCACTACGACTAGCTAGAC
GACCCAACCGGGGTCACACAGGAGGGGGGGGGGGGGTGGACCCCCTCCTG
CGGTGCCTGCCTGATATGTTTTTGCCGCCGTGTTGTTGCCTGATTGATCT
TTCCTCACGTCACATTACCTTGCCTCACCTTGTGTTTCGACACAGGCCGG
TAGGCTCAGTGGGGAGAGACTCGGCCAGAGCGACGAAGATCACTGCAGCC
CGACCGGCAGCGCAGGGGGCTCCGCGAGCTCAACCAGGACAAGGAGGGGG
GTGTCGCGCGGTCGGGGTCGGGGAGAGGGAACGTTCGCGAGCCGCTACGT
GTACCTAGAAGTGTTCCAGGTGAGAAGCGAGCTCAGGACAGGCAGTGTTC
GCCACCATGTGCGGAAAGCCTGCTTCCCCTCTCCATAAAACAAGAAGGTG
CATGTGTGCAGAGGTCTCGAGCTGTCAAGGTCTTCACAGCCCCGCCTGAG
AAAGTTCCGCTGCGAAAAATTGGGAGCTGAAGCTTGTGACACTTTTTTGT
TTGTTGGTGACCGTCTTTTCTGTGCGTGTGTGCTGCTTGCTGTACAGGTG
TCGAGCGTAAAGGTCCGGCTCAGTCTCCAGCGGGCGAAGGACAGCTTCGA
CAACGTGTACGTCGGGGTGAAGCCGGGGCAGATGCTCCTCGACCTCATGA
TGCGGATGGACAGCGCGCACATCAAGGTGAGAGTCACGGTCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAGTACTGCTGTTGCTGCTG
CGTGCTGCTGTTACCGCTGCTAGTGCTGCTGCGGCGGCCGCGGCGGCGGC
GGCTGCTAGTGCTGCGGCTGTTGCTGCGGCTGCTGCTGCTGTAGTTGTTG
AGATCTGCTTGTTAAAGTGCTGGCTTCCTTGTTTCGTCCCCCTTGCAGTT
CAAGCCCCGGAAGGTCGCCGCCGTCCAACCCCTCAGGCACTACTTACCTA
CCGCTTCACTTTTCTTCGAACGACATCCGGCAGCGCACTCCCCGGACTTA
GCCGACAATGTTAACCTCCACCTTCCTCCACGTGCTTTCGCGAACCTACC
TCCCTCTCCCTGACGCCCCGCATGGGTCAACTTTCAACTTTTATTCACGC
GGCACCCATGGCTCCGACAATCTCTCCCCTATGCCCCTTATTTTACCAGC
AACCTTTGACCTTGGCCCCCATTCATGTGGCCCCCGCGTCACCCCTCCGC
CCCGCCCCTACCCCGCAGCTCAAGTCTCTGATCGTGCACAACGCCACGAC
GACGCGATCGCGGCTGATCATCACCGCCCGGGAGCACTACGAGAGGGAGC
TCAAGCAGCAGGCGTTCTTGATGCTGGGGAGCCTGGAGGCGTTCGGGAAC
CCGGTCGGCCTGCTCCGGGGAATGGGACAGGTGAATATAAATACAAAACA
TATGTATACATGCATACATACAAGATCCCTCTTCGGAGCGAGCTCCTGAG
AGAGCACAGCGGCGGGGAGTGATGCAAGACCAAAGCAAACAGATGAAGGC
AGCAGCAGAAGTACTCCTAAATTTACAATTGAAAACGAAGAACCCATAAA
TTAAAAGCGACGTTTTTTCTTGAAACATCTTAAATACATACGTACATATG
GTATAGATATAATACTTGGAAAAATCTTGGAATGTATGTTTTAGAGGCGT
TCAGACAACCTGGTGGTCGGTTCGCTGCAGAGAATGAGTGGGCCAGGTAG
TTTATTTTTTTGGCGCCGCCCACGACACCCCGCCGGCTGTGCTGCTTGCG
TTAAGGGGGTGTATTGGCGCGTGTACGCGTGTCTCGCCTCTCGGAGGCAT
CTTGGGATGTTAATGTTGTTGAGGCGTTCGAAAACCTGTGCCCAGGATAA
ACACAGCACCCTGGTAAATAGAAACATAAAACACACCTCTGCGGGTACTA
CCCCCTTTTGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGAGG
GTGGGGGCCAGTGGGGCAGACGACGAATTAGCCACTAATGGAAGGAAAAA
CAAAAAAACTAGGCAGCACCCAAAAATGGTGCGCTGCTTCTAAATTTTCT
CGGACCCTAGTCCGAGAGCGCTGTGGTAAACGCGTGGGTATCCATCCGTA
AGAAAAAAAGAAAAAGTAAAAAAAAAAAACGGTCGGCTTGCTCCATGGAA
TGGGCCGGGTGACTCTTGATATTTTGTGTTTTGTTCCGTCTTCTGGCGAA
ACCGTCGAAAAAAACCTCGTTGCCAGTGGCACCTCCTCACTCCAACCATG
GCTGTTTTTTGCGTTGAGGGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTCTGTGTTTTTTTTCTTGCCAAAATAAATGCCGTATTTTGTTTCTGTT
GAGCGTGTCATAGAGGGACGTGAATATGTAGGGTGCACGTCGAAAAGGGC
GAAGAAAAGACGCAGCCTTGCGTTCGTTGTAAACTCCTCCGTTACAGTAG
ATCTGAAAAACGCTTGAAGGAGTGTCTTTTGGCTTCTTCCACCACCCCGG
AGGTACATCGCACGGGGAGCCGCGGATGGAAGGAAAACAACAGGCCCCCT
TCGTTTCTGTGCGCATGGTTTTTCGTTCGTCCGTCCGAGCAGGGGATGCA
AGACTTCGTCAAGGAGCCGGTGCTGGGGCTGCTGAAGAGCGTGGAGGACC
AGGCGCCGGAGGAACTGATGCACGGCATGGCGAGGGGGGCCGGGAGCCTC
TTGAACCACTCCGTCGGCGGAGTCGCAAACTCCTTCTCCCTCATAACAGG
T
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7251:416..6166+

>mRNA_L-elsbetiae_contig7251.16117.1 ID=mRNA_L-elsbetiae_contig7251.16117.1|Name=mRNA_L-elsbetiae_contig7251.16117.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2316bp|location=Sequence derived from alignment at L-elsbetiae_contig7251:416..6166+ (Laminarionema elsbetiae ELsaHSoW15)
GCCGAGCCTTCTCCCGTCCGAGGAGGGGGGGGGGGCGCGGGGGGGGGCGG
GTTGTCCGGGGAGGTTTCTCTGAAGGAGTTGCACGTGTTCTGTAGGGCCG
TTCGGATTTCGGTCGTAGACGGGGGCCTGGGAGAGGTGGTGCTGGGGTCC
CTGGAGGGAATGTCGATGAGCGTCGCGGCGACGGAGGCGGAGGTGGAGGT
GAAGTTCAAGCTCGGCAGCCTGCAGATCGACAGCCACATGCCGGGGCCGA
GCCTTCTCCCGTCCGAGGAGGGGGGGGGGGCGCGGGGGGGGGCGGGTTGT
CCGGGGAGGTTTCTCTGAAGGAGTTGCACGTGTTCTGTAGGGCCGTTCGG
ATTTCGGTCGTAGACGGGGGCCTGGGAGAGGTGGTGCTGGGGTCCCTGGA
GGGAATGTCGATGAGCGTCGCGGCGACGGAGGCGGAGGTGGAGGTGAAGT
TCAAGCTCGGCAGCCTGCAGATCGACAGCCACATGCCGGGGACCTCGTTT
CCCGTGCTGCTCCAGCCCGTGAAGCCTGGCGACCTTAGCAGAGGAGGGAA
CAAGTGCGTCCGCTTCACGCTTGTGGCGGCCCCCCGCGTCAAGAACGTCA
CCTACATCAAGGACCTCGTTTCCCGTGCTGCTCCAGCCCGTGAAGCCTGG
CGACCTTAGCAGAGGAGGGAACAAGTGCGTCCGCTTCACGCTTGTGGCGG
CCCCCCGCGTCAAGAACGTCACCTACATCAAGCTGGCGAGTCTGAGCGTG
GAAGAGTTTGACCTGCGCCTGGACGAGGGGATGGTTAGGTGGGCGCAAGG
GCTGGCGGACCGCGTGATGTGGACCCTCGTTGCGGACAAGAGGGTGGACG
AGATGGCCAGGTGGCCCCTTCCCGAGGAGGCGTTTTGCTCACCGCAGCTG
GCGAGTCTGAGCGTGGAAGAGTTTGACCTGCGCCTGGACGAGGGGATGGT
TAGGTGGGCGCAAGGGCTGGCGGACCGCGTGATGTGGACCCTCGTTGCGG
ACAAGAGGGTGGACGAGATGGCCAGGTGGCCCCTTCCCGAGGAGGCGTTT
TGCTCACCGCAGGCCGGTAGGCTCAGTGGGGAGAGACTCGGCCAGAGCGA
CGAAGATCACTGCAGCCCGACCGGCAGCGCAGGGGGCTCCGCGAGCTCAA
CCAGGACAAGGAGGGGGGTGTCGCGCGGTCGGGGTCGGGGAGAGGGAACG
TTCGCGAGCCGCTACGTGTACCTAGAAGTGTTCCAGGCCGGTAGGCTCAG
TGGGGAGAGACTCGGCCAGAGCGACGAAGATCACTGCAGCCCGACCGGCA
GCGCAGGGGGCTCCGCGAGCTCAACCAGGACAAGGAGGGGGGTGTCGCGC
GGTCGGGGTCGGGGAGAGGGAACGTTCGCGAGCCGCTACGTGTACCTAGA
AGTGTTCCAGGTGTCGAGCGTAAAGGTCCGGCTCAGTCTCCAGCGGGCGA
AGGACAGCTTCGACAACGTGTACGTCGGGGTGAAGCCGGGGCAGATGCTC
CTCGACCTCATGATGCGGATGGACAGCGCGCACATCAAGGTGTCGAGCGT
AAAGGTCCGGCTCAGTCTCCAGCGGGCGAAGGACAGCTTCGACAACGTGT
ACGTCGGGGTGAAGCCGGGGCAGATGCTCCTCGACCTCATGATGCGGATG
GACAGCGCGCACATCAAGCTCAAGTCTCTGATCGTGCACAACGCCACGAC
GACGCGATCGCGGCTGATCATCACCGCCCGGGAGCACTACGAGAGGGAGC
TCAAGCAGCAGGCGTTCTTGATGCTGGGGAGCCTGGAGGCGTTCGGGAAC
CCGGTCGGCCTGCTCCGGGGAATGGGACAGCTCAAGTCTCTGATCGTGCA
CAACGCCACGACGACGCGATCGCGGCTGATCATCACCGCCCGGGAGCACT
ACGAGAGGGAGCTCAAGCAGCAGGCGTTCTTGATGCTGGGGAGCCTGGAG
GCGTTCGGGAACCCGGTCGGCCTGCTCCGGGGAATGGGACAGCAGGGGAT
GCAAGACTTCGTCAAGGAGCCGGTGCTGGGGCTGCTGAAGAGCGTGGAGG
ACCAGGCGCCGGAGGAACTGATGCACGGCATGGCGAGGGGGGCCGGGAGC
CTCTTGAACCACTCCGTCGGCGGAGTCGCAAACTCCTTCTCCCTCATAAC
AGGTCAGGGGATGCAAGACTTCGTCAAGGAGCCGGTGCTGGGGCTGCTGA
AGAGCGTGGAGGACCAGGCGCCGGAGGAACTGATGCACGGCATGGCGAGG
GGGGCCGGGAGCCTCTTGAACCACTCCGTCGGCGGAGTCGCAAACTCCTT
CTCCCTCATAACAGGT
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