mRNA_L-elsbetiae_contig7249.16113.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7249.16113.1
Unique NamemRNA_L-elsbetiae_contig7249.16113.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: D8LQ51_ECTSI (Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ51_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 3.550e-173
Identity = 248/308 (80.52%), Postives = 273/308 (88.64%), Query Frame = 1
Query:    1 RGIQSGTKRWPAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAMLATR 924
            RG++ G  RWP +V+LVEVGPRDGLQNE STVPT VKVEL+D L+AAGC  IEAASFVSPKWVPQMADG +VLA + RAPGV YAALTPN+RGLE AL+AGADEVAVFAAASEAFS+ANINCSI ESL+RFKPV+EKA  A LPVRGYVSCVLGCPYEGRV P  V +V  SLLDMGCYSVSLGDTIGAGTAGSTL L+E+L+ AGVPL K A+HFHDTYGQALANILVALEEG+TV DTSVSGLGGCPYAPGA+GNVATEDVVYML+GMGINTGV+LDLLL+ S YIS++L RPPQSR A AMLA R
Sbjct:   27 RGLKCGAIRWPKSVSLVEVGPRDGLQNELSTVPTEVKVELIDRLAAAGCKAIEAASFVSPKWVPQMADGDQVLANLGRAPGVKYAALTPNLRGLEAALEAGADEVAVFAAASEAFSSANINCSIVESLERFKPVMEKAKVAGLPVRGYVSCVLGCPYEGRVAPGAVAEVATSLLDMGCYSVSLGDTIGAGTAGSTLVLLETLREAGVPLEKVAVHFHDTYGQALANILVALEEGITVLDTSVSGLGGCPYAPGASGNVATEDVVYMLDGMGINTGVDLDLLLDTSLYISDKLGRPPQSRVARAMLAKR 334          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: UPI0016659C4E (hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella bauzanensis TaxID=657419 RepID=UPI0016659C4E)

HSP 1 Score: 395 bits (1016), Expect = 8.660e-136
Identity = 199/298 (66.78%), Postives = 237/298 (79.53%), Query Frame = 1
Query:   31 PAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAMLATR 924
            P+ V +VEVG RDGLQNE++ VPT VK+ L++ L+AAG   +EA +FVSPKWVPQMAD +EV+A + R PG  Y  LTPN++GLE AL AGADEVAVF AASEAFS  NINC+I ESLDRF+PV++ A AA   VRGYVSCVLGCPYEG + PE V +V+++LLDMGCY VSLGDTIG GTAG    L+E++ A  VP  + A+HFHDTYGQALANIL ALEEG+ V D+SV+GLGGCPYA GATGNVATEDV+YML GMGINTGV+LD +LEA  +IS+QL RPP  R + AM A R
Sbjct:    4 PSDVRIVEVGARDGLQNEKAVVPTAVKIALIEQLAAAGLPAVEATAFVSPKWVPQMADHAEVMAGLTRRPGTRYPVLTPNIKGLEAALAAGADEVAVFGAASEAFSKRNINCTIAESLDRFRPVVDAARAAGAEVRGYVSCVLGCPYEGEIAPEKVAEVSKALLDMGCYEVSLGDTIGVGTAGRVHRLIETVSAV-VPRERLAVHFHDTYGQALANILAALEEGIAVVDSSVAGLGGCPYAKGATGNVATEDVLYMLHGMGINTGVDLDAVLEAGWFISDQLGRPPVGRVSRAMRARR 300          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: A0A1Y5SIC2_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5SIC2_9PROT)

HSP 1 Score: 386 bits (991), Expect = 5.460e-132
Identity = 191/297 (64.31%), Postives = 228/297 (76.77%), Query Frame = 1
Query:   28 WPAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAMLA 918
            WP  V + EVGPRDGLQNE+  V   VK ELVD L AAG GT+EAASFVSPKWVPQMA  +EV+A I R PG  Y ALTPN+RG E A +AG DEVAVFAAASE FS  NINCS+ ESL+ F+PV+E A AA LPVRGYVSCVLGCP++G VPP DV +V  +L  MGCY VSLGDTIG GT      ++E++ A  +P+ K  +H+HDTYGQALANIL +LE G+   D+SV+GLGGCPYAPGATGNVATEDVVYML+G+GI TG++L+ L+  + +IS++L RPP SR A AM A
Sbjct:    3 WPTRVRMFEVGPRDGLQNEKQEVSPAVKAELVDRLVAAGIGTVEAASFVSPKWVPQMAGSAEVMAAIHRVPGARYTALTPNMRGFEAAREAGVDEVAVFAAASEGFSRKNINCSVAESLEMFRPVVEAAKAAGLPVRGYVSCVLGCPFDGDVPPGDVARVAAALYGMGCYEVSLGDTIGVGTPARARAMLEAV-AGDIPVEKIGVHYHDTYGQALANILASLEFGIATIDSSVAGLGGCPYAPGATGNVATEDVVYMLDGLGIETGIDLEALVRTAWWISDRLGRPPVSRVARAMKA 298          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: A0A2U1VHB5_9PROT (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VHB5_9PROT)

HSP 1 Score: 384 bits (986), Expect = 2.730e-131
Identity = 194/293 (66.21%), Postives = 230/293 (78.50%), Query Frame = 1
Query:   31 PAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATA 909
            P  V +VEVGPRDGLQNE++ VPT VKVELVD LSAAG G +EAASFVSPKWVPQM D ++VLA I R PGV YAALTPN++GLEGAL A ADEVAVF AASE+FS  NINCSI ESLDRF PV+E+A A  LPVRGY+SCVLGCPYEG + P+ V +V   L  MGCY +SLGDTIG GT      ++ ++ A  VP+ K A+HFHDTYGQALANIL AL+ GV V D+SV+GLGGCPYA GA+GNVA+EDV+YML G+GI TGV+LD L+ A ++IS+ + RP  S+ A A
Sbjct:    4 PNVVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLGVVEAASFVSPKWVPQMGDSADVLAGITRKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSQKNINCSIAESLDRFAPVMERARAEGLPVRGYISCVLGCPYEGEIAPKAVAEVAERLFAMGCYEISLGDTIGTGTPAKAQAMITAV-AERVPMDKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDRLIAAGAFISDAIGRPTASKVARA 295          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: UPI0004212E15 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004212E15)

HSP 1 Score: 383 bits (984), Expect = 5.500e-131
Identity = 195/295 (66.10%), Postives = 229/295 (77.63%), Query Frame = 1
Query:   25 RWPAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATA 909
            R PA V +VEVGPRDGLQNE++ VPT VKVELVD LSAAG   +EA SFVSPKWVPQMAD +EV+  I R PG  YA LTPN++GLEGAL+A ADEVAVF AASE+FS  NINCSI ESL+RF PV+E+A AA +PVRGYVSCVLGCPYEG + P  V  V   L++MGCY VSLGDTIG GT G    ++ ++ A  VP  K A+HFHDTYGQALANIL ALE GV V D+SV+GLGGCPYA GA+GNVA+EDV+YML G+G+ TGV+LD L+ A ++I E L RP  S+ A A
Sbjct:    2 RIPARVRMVEVGPRDGLQNEKTMVPTAVKVELVDRLSAAGLPVVEAGSFVSPKWVPQMADSAEVMQAIARRPGTRYAVLTPNLKGLEGALEARADEVAVFGAASESFSRKNINCSIAESLERFAPVMERARAAGVPVRGYVSCVLGCPYEGEIAPAAVAGVAARLMEMGCYEVSLGDTIGTGTPGKAQAMIAAV-AERVPPEKLAVHFHDTYGQALANILAALEMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGVETGVDLDALIAAGAFIGEALGRPTASKVARA 295          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: A0A162KV33_9PROT (Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella TaxID=171436 RepID=A0A162KV33_9PROT)

HSP 1 Score: 382 bits (980), Expect = 2.570e-130
Identity = 188/296 (63.51%), Postives = 231/296 (78.04%), Query Frame = 1
Query:   31 PAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAMLA 918
            P+ V +VEVG RDGLQNE+  VPT VK+EL++ L+AAG   +EA +FVSPKWVPQMAD +EV+  + R PG  Y  LTPN++GLE AL+ GADEVAVF AASEAFS  NINC+I ESL+RF+PV+E+A  A   VRGYVSCVLGCPYEG + P  V +V+++L +MGCY VSLGDTIG GTAG   TL++++ A  VP  + A+HFHDTYGQALANIL ALEEG+ V D SV+GLGGCPYA GATGNVATEDV+YML GMGI TG++ D +L+A  +IS+QL RPP  R + A+ A
Sbjct:    4 PSEVRIVEVGARDGLQNEKEVVPTAVKIELIERLAAAGLPAVEATAFVSPKWVPQMADHAEVMRGLTRRPGTRYPVLTPNLKGLESALEVGADEVAVFGAASEAFSKRNINCTIAESLERFRPVVERAREAGAQVRGYVSCVLGCPYEGEIDPAKVAEVSKALYEMGCYEVSLGDTIGTGTAGKVKTLIDTVSAV-VPRDRLAVHFHDTYGQALANILAALEEGIAVVDASVAGLGGCPYAKGATGNVATEDVLYMLNGMGIRTGIDFDAVLQAGWFISDQLGRPPAGRVSRALRA 298          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: A0A485L5I6_9STRA (Hydroxymethylglutaryl-CoA lyase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5I6_9STRA)

HSP 1 Score: 380 bits (976), Expect = 1.750e-129
Identity = 190/304 (62.50%), Postives = 235/304 (77.30%), Query Frame = 1
Query:    1 RGIQSGTKRWPAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAM 912
            R + + +  +P+ V +VEVGPRDGLQNE+  VPT  KV L+++LS AG   +EA SFVSPKWVPQM D SEV+ +I+R  GV Y  LTPN+ G + A++  A EVA+F AASE+FS  NINCSIQESL+RF+PV EKA +  + VRGYVSCVLGCPYEG + P  V +V ++LLDMGCY +SLGDTIG GT GSTL ++++ K   VP+ K A+HFHDTYGQALANIL+AL+EGVTV D++V+GLGGCPYA GATGNVATEDVVYML G+GI TGV+LD ++EA  +IS  L RP  SR A AM
Sbjct:    8 RPLSTRSITYPSYVKIVEVGPRDGLQNEKGVVPTADKVTLINMLSDAGLPVVEATSFVSPKWVPQMGDNSEVMKQIKRKEGVFYPVLTPNIVGFDAAIKVNAHEVAIFGAASESFSRKNINCSIQESLERFQPVCEKAQSLGVRVRGYVSCVLGCPYEGPIDPAVVARVAKTLLDMGCYEISLGDTIGIGTPGSTLKMLQATKEV-VPVDKLAVHFHDTYGQALANILIALQEGVTVVDSAVAGLGGCPYAKGATGNVATEDVVYMLHGLGIKTGVDLDKVMEAGEFISSVLGRPTNSRVARAM 310          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: G7Z9X9_AZOL4 (Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospirillum TaxID=191 RepID=G7Z9X9_AZOL4)

HSP 1 Score: 379 bits (973), Expect = 2.580e-129
Identity = 194/293 (66.21%), Postives = 226/293 (77.13%), Query Frame = 1
Query:   31 PAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATA 909
            P  V +VEVGPRDGLQNE+S VPT VKVELVD LS AG   +EAASFVSPKWVPQM D +EVLA I R PGV YAALTPN++GLEGAL A ADEVAVF AASE+FS  NINCSI ESLDRF PV+E+A AA +PVRGYVSCVLGCPYEG + P  V  V   L  MGCY +SLGDTIG GT      ++ ++ A  VP+ K A+HFHDTYGQALANIL AL+ GV V D+SV+GLGGCPYA GA+GNVA+EDV+YML G+GI TGV+LD L+ A ++I + + RP  S+ A A
Sbjct:    4 PKFVRMVEVGPRDGLQNEKSMVPTAVKVELVDRLSDAGLSVVEAASFVSPKWVPQMGDSAEVLAGIARKPGVRYAALTPNLKGLEGALAAKADEVAVFGAASESFSRKNINCSIAESLDRFSPVMEQAKAAGVPVRGYVSCVLGCPYEGEIAPRAVADVAERLFAMGCYEISLGDTIGTGTPTKAQAMIAAV-AERVPVEKIAVHFHDTYGQALANILAALQMGVAVVDSSVAGLGGCPYAKGASGNVASEDVLYMLNGLGIETGVDLDKLIAAGAFIGDAIGRPTASKVARA 295          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: UPI000E2EF336 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI000E2EF336)

HSP 1 Score: 378 bits (970), Expect = 7.920e-129
Identity = 192/296 (64.86%), Postives = 233/296 (78.72%), Query Frame = 1
Query:   31 PAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAMLA 918
            P +VTLVEVGPRDGLQNE +T+  + K++L+  L+AAG   IEA SFV+PKWVPQMAD   V A + RAPGV Y ALTPN++G E AL AGADEVAVF AASE FS  NINCS+ ESL RF PV++ A   ++PVRGYVSCVLGCPYEG + PE V +V+ +LLDMGCY VSLGDTIG GTAGST TL+E L A  +P  + A+HFHDTYGQALANILVAL+ G+T  D SV+GLGGCPYA GA+GNVATEDVVY+L+G+GI++G++L  L+ A + IS+ L R P SR+A A+LA
Sbjct:    4 PTSVTLVEVGPRDGLQNEATTIALQDKLQLIQDLAAAGHRVIEAGSFVNPKWVPQMADSEAVFAGLTRAPGVRYTALTPNLQGFERALAAGADEVAVFGAASERFSQKNINCSVAESLQRFAPVMQAAAQHNIPVRGYVSCVLGCPYEGDIAPEKVREVSAALLDMGCYQVSLGDTIGTGTAGSTATLLEHLLAT-LPAERLAVHFHDTYGQALANILVALQHGITTIDASVAGLGGCPYAKGASGNVATEDVVYLLDGLGIDSGIDLTALVAAGARISKVLGREPVSRSARALLA 298          
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Match: UPI0019D37B76 (hydroxymethylglutaryl-CoA lyase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D37B76)

HSP 1 Score: 377 bits (969), Expect = 1.120e-128
Identity = 195/296 (65.88%), Postives = 227/296 (76.69%), Query Frame = 1
Query:   31 PAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCGTIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQAGADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVSCVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLMESLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPYAPGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRAATAMLA 918
            P  VTLVEVGPRDGLQNE++T+    KV L+D L+AAG   IEA SFV+PKWVPQMAD   V A + R PGV Y ALTPN++G E AL AGADE+AVFAAASE FS  NINCS+ ESL+RF PV   A  A LPVRGYVSCVLGCPY+G +PPE V KVT +LLDMGCY VSLGDTIG GTAGS   L+++L A+     + A+H HDTYGQALANILVAL+ G+   D SV+GLGGCPYA GATGNVATEDVVYML+G+GI+ G++LD L+ A + IS  L R P SRAA A+LA
Sbjct:    4 PDTVTLVEVGPRDGLQNEKATIALADKVRLIDDLAAAGHTVIEAGSFVNPKWVPQMADSEAVFAALTRRPGVRYVALTPNLKGFERALAAGADEIAVFAAASEGFSQKNINCSVAESLERFAPVATAAREAGLPVRGYVSCVLGCPYDGDIPPEQVAKVTGALLDMGCYEVSLGDTIGTGTAGSMARLLDTLLAS-YRAEQLAVHCHDTYGQALANILVALQHGIATVDASVAGLGGCPYARGATGNVATEDVVYMLQGLGIDCGLDLDALVRAGARISRALGREPASRAARALLA 298          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7249.16113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ51_ECTSI3.550e-17380.52Hydroxymethylglutaryl-CoA lyase n=2 Tax=Ectocarpus... [more]
UPI0016659C4E8.660e-13666.78hydroxymethylglutaryl-CoA lyase n=1 Tax=Tistrella ... [more]
A0A1Y5SIC2_9PROT5.460e-13264.31Hydroxymethylglutaryl-CoA lyase n=1 Tax=Oceanibact... [more]
A0A2U1VHB5_9PROT2.730e-13166.21Hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
UPI0004212E155.500e-13166.10hydroxymethylglutaryl-CoA lyase n=1 Tax=Azospirill... [more]
A0A162KV33_9PROT2.570e-13063.51Hydroxymethylglutaryl-CoA lyase n=3 Tax=Tistrella ... [more]
A0A485L5I6_9STRA1.750e-12962.50Hydroxymethylglutaryl-CoA lyase n=1 Tax=Aphanomyce... [more]
G7Z9X9_AZOL42.580e-12966.21Hydroxymethylglutaryl-CoA lyase n=12 Tax=Azospiril... [more]
UPI000E2EF3367.920e-12964.86hydroxymethylglutaryl-CoA lyase n=1 Tax=Parahaliea... [more]
UPI0019D37B761.120e-12865.88hydroxymethylglutaryl-CoA lyase n=1 Tax=Parahaliea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7249contigL-elsbetiae_contig7249:6734..9999 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score496.1
Seed ortholog evalue1.2e-137
Seed eggNOG ortholog2880.D8LQ51
KEGG rclassRC00502,RC00503,RC01118,RC01946
KEGG koko:K01640
KEGG ReactionR01360,R08090
KEGG Pathwayko00072,ko00280,ko00281,ko00650,ko01100,ko04146,map00072,map00280,map00281,map00650,map01100,map04146
KEGG ModuleM00036,M00088
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydroxymethylglutaryl-CoA lyase activity
EggNOG OGsCOG0119@1,KOG2368@2759
EC4.1.3.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionHydroxymethylglutaryl-CoA lyase
Ec32 orthologEc-26_006120.1
Exons5
Model size930
Cds size930
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7249.16113.1prot_L-elsbetiae_contig7249.16113.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7249 6734..9999 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816807.6438959-CDS-L-elsbetiae_contig7249:6733..68441622816807.6438959-CDS-L-elsbetiae_contig7249:6733..6844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 6734..6844 +
1691683828.5856116-CDS-L-elsbetiae_contig7249:6733..68441691683828.5856116-CDS-L-elsbetiae_contig7249:6733..6844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 6734..6844 +
1622816807.6545331-CDS-L-elsbetiae_contig7249:8047..82481622816807.6545331-CDS-L-elsbetiae_contig7249:8047..8248Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 8048..8248 +
1691683828.6052413-CDS-L-elsbetiae_contig7249:8047..82481691683828.6052413-CDS-L-elsbetiae_contig7249:8047..8248Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 8048..8248 +
1622816807.6703112-CDS-L-elsbetiae_contig7249:8822..90141622816807.6703112-CDS-L-elsbetiae_contig7249:8822..9014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 8823..9014 +
1691683828.6173143-CDS-L-elsbetiae_contig7249:8822..90141691683828.6173143-CDS-L-elsbetiae_contig7249:8822..9014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 8823..9014 +
1622816807.6839364-CDS-L-elsbetiae_contig7249:9156..93511622816807.6839364-CDS-L-elsbetiae_contig7249:9156..9351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 9157..9351 +
1691683828.6329293-CDS-L-elsbetiae_contig7249:9156..93511691683828.6329293-CDS-L-elsbetiae_contig7249:9156..9351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 9157..9351 +
1622816807.6943085-CDS-L-elsbetiae_contig7249:9768..99991622816807.6943085-CDS-L-elsbetiae_contig7249:9768..9999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 9769..9999 +
1691683828.648482-CDS-L-elsbetiae_contig7249:9768..99991691683828.648482-CDS-L-elsbetiae_contig7249:9768..9999Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 9769..9999 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7249.16113.1

>prot_L-elsbetiae_contig7249.16113.1 ID=prot_L-elsbetiae_contig7249.16113.1|Name=mRNA_L-elsbetiae_contig7249.16113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp
RGIQSGTKRWPAAVTLVEVGPRDGLQNERSTVPTRVKVELVDLLSAAGCG
TIEAASFVSPKWVPQMADGSEVLAKIRRAPGVNYAALTPNVRGLEGALQA
GADEVAVFAAASEAFSAANINCSIQESLDRFKPVLEKATAASLPVRGYVS
CVLGCPYEGRVPPEDVIKVTRSLLDMGCYSVSLGDTIGAGTAGSTLTLME
SLKAAGVPLHKTAMHFHDTYGQALANILVALEEGVTVFDTSVSGLGGCPY
APGATGNVATEDVVYMLEGMGINTGVNLDLLLEASSYISEQLRRPPQSRA
ATAMLATRG*
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mRNA from alignment at L-elsbetiae_contig7249:6734..9999+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7249.16113.1 ID=mRNA_L-elsbetiae_contig7249.16113.1|Name=mRNA_L-elsbetiae_contig7249.16113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3266bp|location=Sequence derived from alignment at L-elsbetiae_contig7249:6734..9999+ (Laminarionema elsbetiae ELsaHSoW15)
CGAGGCATACAGAGCGGAACGAAAAGGTGGCCCGCGGCCGTTACGCTGGT TGAAGTAGGCCCACGAGACGGACTCCAGAACGAGCGTTCAACGGTGCCAA CACGGGTCAAGGTGAGGAAGCGCCCGTTTTGCAAGCATGTCTAAACGTTA CGGCACGATACGGACCTACACAAATCACTGTTTAATTCTACCCGCGCCCC AGAGCCCTGTGTTGCTGTCGACGGCAGCACCGGGCACAGATCCCCGCCGC AGGGAGGTGAGACAATCTTGTAGTCATGTTCCTTCTTAAAATGTGCTACG GTAGACCGTTCCTGGGCATCTCCGTTGGATGCATGCAACGTTGGTATGAA ACCAGTGATTGGTTGTACCCTTGGCAATGGCCACTGCTAACAGCGATGTG ATAACTAGACTACAAAGTGTGTGTGTGTGTCCTTCCCATTTATTTTGGCG ACAGTCCCCCCAAGTGGAGACGTGTACTACACCTTGCGGTGTACTTAGAG GTACTCAACTAGAACCAACCGGGGTCACACAGGAGGAGGTGAACACTTGG GCTTTTTCTTCTTTTATTTTCTTTTTTTTGCCCCACCTTCCTCCTGCGGT TCTTGCTTTCATTCTTATCGCGAGAAGGGTTCAACCACACCTTTCCCTCG TCAACGTGATTACGTCGAAGTTTGGTACTCACGAGCTTTTCAGCTTTTAT CGCTTTCACCTGCAAAGTCGCAAAAGAAACACTTAGGAGTATTTATCTAG ACTAACTCTCGATACCTTCAGAGAACTACTACTGTTTGTTGTACACATCT TGTAGATATGTATCTAGATACGAGGTGATCCATACGTTTGAAGATCTATG TAGAGAATATAGTTTGAATTGGCGCTCAGTTGGCCGAAAGGCAAGGAAAG AGAAGGGCCCTGGAAGAAGCGGGAACATAAGAGAAATTAGGAGTAGGATA GTGAGCAGGTGAGGGCCAGCACCAAGGGCGAGCCTCCAACCTATAACGTA AAGATATACACGCACGGACTATTGTAACCTACCGATCTCGGTATACAGAC GATTCATTGTCCCGCCTGGCCCGCCTGTAACAACGTTAGGGTATCCTAAG GACACTGTCCGATGGGTCGTTACTCGTATGGCTCAGTGGAGACCCGTAGG TGTGTATGTACGCGCTATGATCCGATCTTAACAATGTACCTACCGAAGAC TTTCCGGTATTGCTTCGTACGTGGTTACCCAGATATACTAATCTACTACA ATGTTGTTCACAGCAGCATCAAACTCATGACGGGCATAAAGTGATTCAAC ATGCAATACGACAGGTGGAATTGGTGGATCTTTTGTCTGCTGCCGGGTGC GGAACTATCGAAGCCGCATCTTTCGTCAGCCCCAAGTGGGTCCCCCAGAT GGCCGACGGGAGCGAGGTCTTGGCCAAGATTCGACGAGCGCCGGGTGTCA ACTACGCCGCCTTGACACCCAACGTCCGAGGATTGGAGGGAGCACTTCAG GCTGGCGCTGATGAGGTGCAGTTCGTTGGGAGAAATAGATCGTTATTCTC TGTACATATTGCGGTCTACTGCTATCTGCAGTGCCACCGTCCGTATACTT GCCAGCTATTCCCTGCGGTGGAGTTACAAGTATGACGACCAGCATCCACG GCTCATTGTCCAAGAATACCCCCACAGAAGGGTCGTCGGGTAAAGTAAAG GATCGAGCGGGAGGCAGCAGTGGGGGGGCATCAGCGCGGATCCTGTCAAC GGGTTTGGGGATGGAAGGTGTAAGACTCTTTTGCTCAAGCAGCGCCTCTC TAAACTTGCCGAGTTTGGGAATGGAAGGTGTAAGCCTTTTTGCCCAATCA ACGCCTGTCTAAACTTGCCGAGAGAAAATCAACGCCTGTCTAAACTTGCC GAGAGAAAAGGTGAAACCGGATTACATCCGGCAACCAGGTACACCGAGAA GCCTCCAGCACTTCAGAACACCCCCTAGCACGCTGTCAGAACCCCAAGCA GTTGATACCCATCAACGCACCCACCTTTACCCGCTGCTACCTCTGTCCTC GATGCACCGTTTGGACTCATGCGTGTCTCTGTAAACCAGGTAGCGGTTTT CGCGGCGGCATCAGAGGCGTTTAGTGCGGCCAACATTAACTGCTCTATCC AGGAGAGCCTAGACCGTTTTAAGCCAGTACTTGAGAAAGCGACGGCAGCG AGCTTGCCAGTACGGGGCTACGTTTCCTGCGTGCTCGGGTGTCCATACGA GGGGCGAGTGCCTCCAGAGGACGTCATCAAGGTCAGAAACAGGGCTATTA TTGTGATCACATTTACAAACAGCAGTGCAGGGCTTCGTATGGAGCACGCA ATGATGTTGCCGTCGTGTCTGCGGACTCCTTGCACGAACTTTGCGTCGCG CTTTTTCGTCGTACTCGAGGCAGGTGACGCGCTCTCTTTTGGACATGGGG TGCTACTCCGTGTCGCTGGGAGACACGATCGGCGCGGGGACTGCCGGCAG CACCCTCACTCTCATGGAAAGCCTGAAGGCAGCAGGAGTGCCTTTGCACA AGACAGCGATGCACTTCCACGACACCTACGGACAAGCCTTGGCGAACATC CTTGTAGCGCTGGAAGAGGTATGTGGGTGCTGTCAGACTAACTGCTGGTC GCTGTGCTAGCCCGAGCAAGGTCTAAAGCGCTGGAGCGGCACACAACCTT CTCTTTTGCTCGTGTCGTGCTTACGGCTGGTAGTTTCGAAATGCCGGCGA AAAAAAGTGCGAAAGCTTCCTGTACATATAGGTCATGGCGCCTCTCACAG TGAAAGGCACAGTAAAGCGAGTTCCTTTGTATTTGTGTTTCAGATGGCTC TTCCAAGCTTCAGAGATGAAAACTCTAGGGAAAGGCAGAGGTGTGCTGTT TTCCATCAGTTCCCCCTGTAGCCGCACATTTTAACTTTGGTCCTCTGAAT CGCGCGTTTCAACCCTCCCACGGCGTTCCTATGCCATTCTCCATCGATCG CGATGCCCTGCTTGCGCCGTGCTGTCTTTGTGCAGGGCGTCACCGTGTTC GACACGTCCGTTTCTGGTCTAGGGGGCTGTCCATACGCTCCAGGGGCAAC TGGGAACGTTGCCACCGAAGACGTCGTGTATATGCTTGAGGGGATGGGGA TCAACACCGGCGTTAACTTAGACTTGCTGCTGGAGGCGTCATCGTATATT TCGGAACAGTTGCGCAGACCACCACAGTCAAGGGCAGCGACGGCCATGTT GGCTACGCGCGGTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7249:6734..9999+

>mRNA_L-elsbetiae_contig7249.16113.1 ID=mRNA_L-elsbetiae_contig7249.16113.1|Name=mRNA_L-elsbetiae_contig7249.16113.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig7249:6734..9999+ (Laminarionema elsbetiae ELsaHSoW15)
CGAGGCATACAGAGCGGAACGAAAAGGTGGCCCGCGGCCGTTACGCTGGT
TGAAGTAGGCCCACGAGACGGACTCCAGAACGAGCGTTCAACGGTGCCAA
CACGGGTCAAGCGAGGCATACAGAGCGGAACGAAAAGGTGGCCCGCGGCC
GTTACGCTGGTTGAAGTAGGCCCACGAGACGGACTCCAGAACGAGCGTTC
AACGGTGCCAACACGGGTCAAGGTGGAATTGGTGGATCTTTTGTCTGCTG
CCGGGTGCGGAACTATCGAAGCCGCATCTTTCGTCAGCCCCAAGTGGGTC
CCCCAGATGGCCGACGGGAGCGAGGTCTTGGCCAAGATTCGACGAGCGCC
GGGTGTCAACTACGCCGCCTTGACACCCAACGTCCGAGGATTGGAGGGAG
CACTTCAGGCTGGCGCTGATGAGGTGGAATTGGTGGATCTTTTGTCTGCT
GCCGGGTGCGGAACTATCGAAGCCGCATCTTTCGTCAGCCCCAAGTGGGT
CCCCCAGATGGCCGACGGGAGCGAGGTCTTGGCCAAGATTCGACGAGCGC
CGGGTGTCAACTACGCCGCCTTGACACCCAACGTCCGAGGATTGGAGGGA
GCACTTCAGGCTGGCGCTGATGAGGTAGCGGTTTTCGCGGCGGCATCAGA
GGCGTTTAGTGCGGCCAACATTAACTGCTCTATCCAGGAGAGCCTAGACC
GTTTTAAGCCAGTACTTGAGAAAGCGACGGCAGCGAGCTTGCCAGTACGG
GGCTACGTTTCCTGCGTGCTCGGGTGTCCATACGAGGGGCGAGTGCCTCC
AGAGGACGTCATCAAGGTAGCGGTTTTCGCGGCGGCATCAGAGGCGTTTA
GTGCGGCCAACATTAACTGCTCTATCCAGGAGAGCCTAGACCGTTTTAAG
CCAGTACTTGAGAAAGCGACGGCAGCGAGCTTGCCAGTACGGGGCTACGT
TTCCTGCGTGCTCGGGTGTCCATACGAGGGGCGAGTGCCTCCAGAGGACG
TCATCAAGGTGACGCGCTCTCTTTTGGACATGGGGTGCTACTCCGTGTCG
CTGGGAGACACGATCGGCGCGGGGACTGCCGGCAGCACCCTCACTCTCAT
GGAAAGCCTGAAGGCAGCAGGAGTGCCTTTGCACAAGACAGCGATGCACT
TCCACGACACCTACGGACAAGCCTTGGCGAACATCCTTGTAGCGCTGGAA
GAGGTGACGCGCTCTCTTTTGGACATGGGGTGCTACTCCGTGTCGCTGGG
AGACACGATCGGCGCGGGGACTGCCGGCAGCACCCTCACTCTCATGGAAA
GCCTGAAGGCAGCAGGAGTGCCTTTGCACAAGACAGCGATGCACTTCCAC
GACACCTACGGACAAGCCTTGGCGAACATCCTTGTAGCGCTGGAAGAGGG
CGTCACCGTGTTCGACACGTCCGTTTCTGGTCTAGGGGGCTGTCCATACG
CTCCAGGGGCAACTGGGAACGTTGCCACCGAAGACGTCGTGTATATGCTT
GAGGGGATGGGGATCAACACCGGCGTTAACTTAGACTTGCTGCTGGAGGC
GTCATCGTATATTTCGGAACAGTTGCGCAGACCACCACAGTCAAGGGCAG
CGACGGCCATGTTGGCTACGCGCGGTTGAGGCGTCACCGTGTTCGACACG
TCCGTTTCTGGTCTAGGGGGCTGTCCATACGCTCCAGGGGCAACTGGGAA
CGTTGCCACCGAAGACGTCGTGTATATGCTTGAGGGGATGGGGATCAACA
CCGGCGTTAACTTAGACTTGCTGCTGGAGGCGTCATCGTATATTTCGGAA
CAGTTGCGCAGACCACCACAGTCAAGGGCAGCGACGGCCATGTTGGCTAC
GCGCGGTTGA
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