mRNA_L-elsbetiae_contig7249.16112.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7249.16112.1
Unique NamemRNA_L-elsbetiae_contig7249.16112.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: D8LQ52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ52_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 2.160e-109
Identity = 182/246 (73.98%), Postives = 195/246 (79.27%), Query Frame = 1 
Query: 1114 SLSTRQSWCIPSRQRYVARPLLWHGRKFHFRMYALLRADMSAWLYRTAYILPASRPYSIGSNTELDGAPGTG----------FADELVHISNLAVNKHTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIADRAGGVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLPALTGCPPEPGRFEAAAEPASGATAPSTETWRNVMRFAAFKRSSRTRT 1821
            +LS  +S+ I   QRYVARP+LW GRKFHFR YALLRADMSAWLYRTAYIL ASRPYS+G N   D     G          FADE VHISNLAVNKHTEGHPGQVPC+          +MLELL SLV AATPFMQHQANPNHFEFLGLD+IAD AGGVWLMEANRLPGLQSSKQNLE+EN+VYDGMM D++RLLVLP LTGC PE G FE AA PASGA APSTETWRNVMRFAAFKRS RT+T
Sbjct:  267 ALSEHESYVI---QRYVARPMLWQGRKFHFRAYALLRADMSAWLYRTAYILSASRPYSLGGNDSRDDGVRVGAGVADMHRAAFADEFVHISNLAVNKHTEGHPGQVPCDLPSEYGALWPKMLELLGSLVDAATPFMQHQANPNHFEFLGLDIIADSAGGVWLMEANRLPGLQSSKQNLEKENEVYDGMMLDLIRLLVLPPLTGCSPEQGLFEVAATPASGARAPSTETWRNVMRFAAFKRSCRTKT 509
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A7S2XVN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.120e-43
Identity = 102/231 (44.16%), Postives = 128/231 (55.41%), Query Frame = 1 
Query: 1153 QRYVARPLLWHGRKFHFRMYALLRADMSAWLYRTAYILPASRPYSIGSNTELDGAPGTGFADELVHISNLAVNKHTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIADR-AGGVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLPALTGCPPEPGRFEAAAEPASGATAPSTET-------------WRNVMRFAAFKR 1803
            Q YVARPLL+HGRKFHFR YALL A M  + Y  AYIL A+  Y +         PG    D + HISN+AVNKH  G+PGQVP             M EL   +++ A+PF+  Q + +HFEFLGLD++AD  A  VWL+E NRLPGLQSSK N  EE+  Y+ MM   + +LV P L   P EP       EP  G    + E              W+NV++FA F +
Sbjct:  101 QEYVARPLLFHGRKFHFRCYALLAASMQGFFYDRAYILAATNQYRLEQ-------PG----DAMTHISNMAVNKHMAGYPGQVPTHLPTDYPQLFERMKELYSEVIRVASPFLAVQRSLSHFEFLGLDIMADADASRVWLLEVNRLPGLQSSKSNQAEEDVTYNTMMSAAMEMLVYPVLKLQPGEP---RGPVEPKGGWCPVNEECPTPTQIVEDHQQGWKNVLKFAMFTK 317
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A7S3Y052_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y052_HETAK)

HSP 1 Score: 137 bits (345), Expect = 2.500e-33
Identity = 81/191 (42.41%), Postives = 105/191 (54.97%), Query Frame = 1 
Query: 1231 MSAWLYRTAYILPASRPYSIGSNTELDGAPGTGFADELVHISNLAVNKHTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIADRAGGV-WLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLL-VLPALTGCPPEPGRFEAAAEPASGATAPSTETWRNVMRFAAF 1797
            +  + Y  AYIL A RPY +G       AP    +D+L HISN+AVNKH  G+PGQ+PC            M E+   LV+AA PF+Q QAN  HFEF GLD +AD  G   WL+E NRLPGLQ+S  N   E+Q+Y+ M+ D+L L+ V   L G       ++  A+P          TW+N   F AF
Sbjct:    7 LQPYFYEMAYILTAMRPYRLG-------AP----SDDLRHISNMAVNKHEAGYPGQIPCRVPVEFPALWASMTEVWAELVRAAAPFLQVQANARHFEFYGLDFLADADGETAWLLEVNRLPGLQASAANKAAEDQMYNKMIADLLELIGVSLPLEGT----NLWQPTAQPEEEVEVNPKMTWKNTFNFKAF 182
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A482RWA3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWA3_9ARCH)

HSP 1 Score: 141 bits (355), Expect = 3.420e-32
Identity = 77/192 (40.10%), Postives = 109/192 (56.77%), Query Frame = 1 
Query: 1153 QRYVARPLLWHGRKFHFRMYALLRADMSAWLYRTAYILPASRPYSIGSNTELDGAPGTGFADEL-VHISNLAVNKHTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIADRAGG------------VWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLPALT 1689
            Q  V RPLL+ GRKFHFR YALL  DM+A+L+R  +IL +S PY    N          +A  L +H++NL++NK   GHPGQ+PC            +  L   +VQAA P+++ Q +  HF+F GLDV+  R               V ++E NRLPGL+SS  N + E+ +YD MMR  LR+++ P ++
Sbjct:  176 QECVPRPLLYQGRKFHFRCYALLMGDMAAYLHRHCFILTSSLPY----NPLEPCTSSEQYASRLRMHVTNLSINKKFTGHPGQIPCNLPADYPDVFLRLSSLWAEIVQAARPYLRCQRSRRHFDFYGLDVVCSRPSSAHHNDDSGAVSEVHVIELNRLPGLESSALNTQAEDALYDEMMRQALRIVLAPEIS 363
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A7S2RIR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIR6_9STRA)

HSP 1 Score: 131 bits (329), Expect = 5.300e-29
Identity = 74/220 (33.64%), Postives = 117/220 (53.18%), Query Frame = 1 
Query: 1153 QRYVARPLLWHGRKFHFRMYALLRADMSAWLYRTAYILPASRPYSIGSNTELDGAPGTGFADELVHISNLAVNK-HTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIADRAGGVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLPALTGCPPEPGRFEAAAEPASGATAPSTETWRNVMRFAAFKRSS 1809
            QRY   PLLWHG+KFH R+Y ++ AD+  ++ R A++  A++P+       +DGA     +D+ VHI+N   N  + E   G++  +           M + L+ LV AA PF++ Q +  +FE++G D + D +G  WL+E N  P  Q S   L     ++D ++ D+L LLVLP + G  P PG +E    PA      S  T  N +R+  F++ +
Sbjct:  196 QRYAPSPLLWHGKKFHVRVYVVVTADLRVYIQRRAFLHVANKPF------RMDGAS---VSDDEVHITNCCANSANREAFAGEIVIDLPSDYPDAFESMKQALQMLVDAAAPFLEAQTSHRYFEYMGCDFMVDTSGCAWLLECN-CPPSQDSATGLPHAEGLHDAVIGDLLDLLVLPEVAGTDPTPGEWEL-VRPAQPGFGISQRTTSNTLRWGLFEKKA 404
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: W7TQE7_9STRA (Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.500e-27
Identity = 80/216 (37.04%), Postives = 115/216 (53.24%), Query Frame = 1 
Query: 1153 QRYVARPLLWHGR-KFHFRMYALLR------------------ADMSAWLYRTAYILPASRPY----SIGSNTELDGAPGTGFADELVHISNLAVNKHTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIA-------------DRAGGVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLPALTG 1692
            QRY+ RPLL   + KFH+R+YALLR                  A    W+Y+  +IL AS  Y      GS  E+D A          H++NL++NKH  G+PGQ+P +           M     ++V+AA PF++ QA+  HFE  GLD +              D+   ++LME NRLPGLQSS+QN  +E+++YD M+R++L L V+P L+G
Sbjct:  200 QRYITRPLLLEKKYKFHYRVYALLRMTGVEETGRTSVDREARRARFQPWIYQHGFILRASERYHHATKCGSANEIDAA---------AHLTNLSLNKHCPGYPGQLPIDLARAPRTFGC-MKAHWAAVVRAAAPFLRAQASSGHFELFGLDYLPVEAACAPEDMMHLDKFDSMYLMEINRLPGLQSSRQNSADEDELYDCMIRELLDLCVMPFLSG 405
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A4D9DE03_9STRA (ADP,ATP carrier protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE03_9STRA)

HSP 1 Score: 110 bits (274), Expect = 6.220e-21
Identity = 73/199 (36.68%), Postives = 99/199 (49.75%), Query Frame = 1 
Query: 1153 QRYVARPLLWHGR-KFHFRMYALLR------------------ADMSAWLYRTAYILPASRPY----SIGSNTELDGAPGTGFADELVHISNLAVNKHTEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIA-------------DRAGGVWLMEANRLPGLQSSKQNLEEENQVYD 1641
            QRY+ RPLL   + KFH+R+YALLR                  A    WLY+  +IL AS  Y      GS  E+D A          H++NL++NKH  G+PGQ+P +           M     ++V+AA PF++ QA+  HFE  GLD +              D    ++LME NRLPGLQSS QN  +E+ +YD
Sbjct:   74 QRYITRPLLLEKKYKFHYRVYALLRMTGVEETGHTSVDGEARRARFQPWLYQHGFILRASERYHHATKCGSANEIDAA---------AHLTNLSLNKHCPGYPGQLPIDLARAPRTFGC-MKAHWAAVVRAAAPFLRAQASSGHFELFGLDFLPVEPARAPEDMMRLDEFDSMYLMEINRLPGLQSSPQNSADEDGLYD 262
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BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A835Z2B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B8_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.970e-20
Identity = 75/233 (32.19%), Postives = 99/233 (42.49%), Query Frame = 1 
Query: 1153 QRYVARPLLWH---GRKFHFRMYALLRADMSAWLYRTAYILPASRPYSIGSNTELDGAPGTGFADELVHISNLAVNKHTEGHPG----------------------------QVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQHQANPNHFEFLGLDVIADRAG--------------------------GVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLP 1680
            QRYVARPLL     G K HFR + +LR D+SAWL+  A +L A  PY++       G P        +H++NLA +K   G                               Q  C+           ML    +   AA P M+HQA+  HF   GLD +AD  G                          GVWL+EANR+PGL S+++N  E+   Y  + RD+L L VLP
Sbjct:  239 QRYVARPLLLPRCGGAKSHFRCFGVLRGDLSAWLHAGACVLRARAPYALSDA----GNPS-------IHLTNLAFSKRPGGXXXXXXXXXXXXXXXXXXXXXXXXXAQRFRPQTACDLPREHPALWPRMLAAWGAAAAAAAPLMRHQASAAHFALFGLDFLADAGGELSXXXXXXXXXXXXXXXXXXXXXXXGVWLLEANRVPGLASTRENWAEDEAFYGALTRDLLDLAVLP 460
[Close]
BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A7S0JK46_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JK46_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 1.050e-16
Identity = 75/242 (30.99%), Postives = 103/242 (42.56%), Query Frame = 1 
Query: 1153 QRYVARPLLWHGRKFHFRMYALLRADMSAWLYRTAYILPASRPYSIGSNTELDGAPGTGFADELVHISNLAVNKH--------TEGHPGQVPCEXXXXXXXXXXEMLELLRSLVQAATPFMQ-------HQANPNHFEFLGLDVIADRAGGVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLPALTGCPPEPGRFEAA--AEPASGATAPSTETWRNVMR---FAAFKRSSRTR 1818
            Q YVA P+L  GRKF  R Y LLR D SA+ Y  A +  AS  Y + S            AD   HI+N  V           T      V  E           ++ LL+ LV + +P +          ++P HFE    D+I        LME N  P   +      E  ++ + M  D+++LLVLPA TGC P PGRF     A+ +  A  PS  + + +     +  FK+S R R
Sbjct:    7 QEYVASPMLLGGRKFEMRQYLLLRGDGSAYTYERALLRLASVQYELSS------------ADRRAHITNKWVQTKWGTSNELCTLEQIEMVSTEWAQYGEVLGRSIVPLLQDLVDSLSPLLAAGRARVPQSSSPFHFELFACDLIVSDQAQAKLMEVNINPAFGTFTAATRE--RLIEPMFADLVKLLVLPAATGCSPRPGRFRCLRKADDSCAAGVPSEASSKELQAHFAYVTFKKSHRKR 234
[Close]
BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Match: A0A7S0XEB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEB2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.430e-12
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 1 
Query: 1486 FMQHQANPNHFEFLGLDVIADRAGGVWLMEANRLPGLQSSKQNLEEENQVYDGMMRDILRLLVLP 1680
            FM++Q N NHFEF G+D+I D     WL+EANRLPGL+SS  N   E+++YD MM  +L +++ P
Sbjct:    2 FMKYQINLNHFEFFGIDIIVDEFDQCWLIEANRLPGLESSNNNKVIEDEMYDTMMSSLLDIILEP 66
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7249.16112.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LQ52_ECTSI2.160e-10973.98Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XVN0_9STRA1.120e-4344.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3Y052_HETAK2.500e-3342.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A482RWA3_9ARCH3.420e-3240.10Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2RIR6_9STRA5.300e-2933.64Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TQE7_9STRA2.500e-2737.04Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DE03_9STRA6.220e-2136.68ADP,ATP carrier protein n=1 Tax=Nannochloropsis sa... [more]
A0A835Z2B8_9STRA2.970e-2032.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0JK46_9EUKA1.050e-1630.99Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0XEB2_9STRA2.430e-1250.77Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7249contigL-elsbetiae_contig7249:721..6503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score195.7
Seed ortholog evalue4.6e-47
Seed eggNOG ortholog2880.D8LQ52
Preferred nameTtll2
KEGG koko:K16608
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein polyglycylation
EggNOG OGsKOG2157@1,KOG2157@2759
Ec32 ortholog descriptionTubulin-tyrosine ligase/Tubulin polyglutamylase
Ec32 orthologEc-26_006110.4
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04812
Exons6
Model size2788
Cds size1308
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7249.16112.1prot_L-elsbetiae_contig7249.16112.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7249 3346..6283 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816807.5312748-UTR-L-elsbetiae_contig7249:720..17891622816807.5312748-UTR-L-elsbetiae_contig7249:720..1789Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 721..1789 -
1691683828.4922943-UTR-L-elsbetiae_contig7249:720..17891691683828.4922943-UTR-L-elsbetiae_contig7249:720..1789Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 721..1789 -
1622816807.5428889-UTR-L-elsbetiae_contig7249:2680..28231622816807.5428889-UTR-L-elsbetiae_contig7249:2680..2823Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 2681..2823 -
1691683828.5055346-UTR-L-elsbetiae_contig7249:2680..28231691683828.5055346-UTR-L-elsbetiae_contig7249:2680..2823Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 2681..2823 -
1622816807.5541413-UTR-L-elsbetiae_contig7249:3297..33451622816807.5541413-UTR-L-elsbetiae_contig7249:3297..3345Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 3298..3345 -
1691683828.5180607-UTR-L-elsbetiae_contig7249:3297..33451691683828.5180607-UTR-L-elsbetiae_contig7249:3297..3345Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 3298..3345 -
1622816807.6144593-UTR-L-elsbetiae_contig7249:6283..65031622816807.6144593-UTR-L-elsbetiae_contig7249:6283..6503Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 6284..6503 -
1691683828.5736163-UTR-L-elsbetiae_contig7249:6283..65031691683828.5736163-UTR-L-elsbetiae_contig7249:6283..6503Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7249 6284..6503 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816807.565872-CDS-L-elsbetiae_contig7249:3345..34751622816807.565872-CDS-L-elsbetiae_contig7249:3345..3475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 3346..3475 -
1691683828.530078-CDS-L-elsbetiae_contig7249:3345..34751691683828.530078-CDS-L-elsbetiae_contig7249:3345..3475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 3346..3475 -
1622816807.5776708-CDS-L-elsbetiae_contig7249:4443..47751622816807.5776708-CDS-L-elsbetiae_contig7249:4443..4775Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 4444..4775 -
1691683828.5413923-CDS-L-elsbetiae_contig7249:4443..47751691683828.5413923-CDS-L-elsbetiae_contig7249:4443..4775Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 4444..4775 -
1622816807.5910175-CDS-L-elsbetiae_contig7249:5036..54861622816807.5910175-CDS-L-elsbetiae_contig7249:5036..5486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 5037..5486 -
1691683828.552674-CDS-L-elsbetiae_contig7249:5036..54861691683828.552674-CDS-L-elsbetiae_contig7249:5036..5486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 5037..5486 -
1622816807.601978-CDS-L-elsbetiae_contig7249:5887..62831622816807.601978-CDS-L-elsbetiae_contig7249:5887..6283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 5888..6283 -
1691683828.5632284-CDS-L-elsbetiae_contig7249:5887..62831691683828.5632284-CDS-L-elsbetiae_contig7249:5887..6283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7249 5888..6283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7249.16112.1

>prot_L-elsbetiae_contig7249.16112.1 ID=prot_L-elsbetiae_contig7249.16112.1|Name=mRNA_L-elsbetiae_contig7249.16112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp
MLNKGHLVTMGRDDSLRDFPSIPAAEQQTTGAAAAAAETLKDRDLTFDSR
HPLTFRVTGAASVARLEPLLLNHHQEDRRKGIWHRALSSGGGGGNSPASN
AQLDFVWETTVTKEQHQQHRNARVLNRLNGAQVLEDKANLVLLQRLMAVP
TLESYVVSGRKMVAQWAKIRFQQRNKPPDARAMPPRPPPEGVIIDEDNSP
RRHPTTIRGAKAAVTTVVPGAVAKAAAAAAAAEVGDGGAGGEDWWCVKAA
GGNGGLDIWVLHEGNWKPVTEELSDTESYVIQVRTESLDNHQRLPPPPLS
LHANRGASRLVSDTWQDRCFGTGGSSTFGCTPSCAPTCPRGCTGQPIFCR
PAGPTPLEVTPSLTGHQERALLTSLCTSATSRSTSTQRATRDRCLVSSPP
STLICGRKCSSCCGLWSKRRRRSCSTRLTRTTSSF*
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mRNA from alignment at L-elsbetiae_contig7249:721..6503-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7249.16112.1 ID=mRNA_L-elsbetiae_contig7249.16112.1|Name=mRNA_L-elsbetiae_contig7249.16112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5783bp|location=Sequence derived from alignment at L-elsbetiae_contig7249:721..6503- (Laminarionema elsbetiae ELsaHSoW15)
GCCTGGGCCTCCGCACGCTTTGCATAGGAAGTCAACTGACTGGACAGAGG
AAACATCCAGTAGCGATAGCAGGAGCTGCTACTCACTCTGGTTCCAAGGG
AATTTGAAGCTGTGTGAACATCAATTTTCAAAGAGCTGCTGACGACGGAC
GCTCTCTCGGGTGCAAAGTGAGTTAGGTTAGTTAGCTGTTAGCAGCACGT
GCCACAAGCAGGATGTCCCTATGTTGAACAAGGGCCATCTTGTGACAATG
GGTCGAGATGACTCGCTGCGGGACTTTCCATCTATCCCAGCAGCCGAGCA
ACAGACGACGGGGGCGGCGGCGGCGGCGGCGGAAACTCTCAAAGATCGTG
ATCTAACGTTCGACAGCCGGCACCCCCTGACCTTCAGAGTGACGGGAGCT
GCTTCAGTAGCTCGCTTAGAGCCGCTTCTCCTTAACCACCACCAGGAAGA
CCGCCGGAAAGGTATCTGGCATCGCGCTCTCAGCAGCGGCGGGGGCGGTG
GAAATAGTCCTGCTTCTAATGCTCAGCTTGATTTCGTGTGGGAGACCACC
GTTACCAAGGAACAGCACCAACAGCACCGGAACGCCAGGGTGCTGAACCG
CCTCAACGGCGCGCAGGTGCCCCTTAGTTATTTGAATGAAGCACCTGTGC
TTGGTCGGTGCAGTGGGCACAAGTGTCAGTGTGTTGAACCTCCCCGAACC
TTGCCTGCAAAGACTGCTTCTGTACCCTATGTATGTAGTACACAGTAGTA
TGTAGATACACCACCAATTTACCCTGATGTGGCTATGCATGTGAACGGTA
TGTGCGTGAGGCAAGAGCTAGTTCTCGACTTTACGCGGCAGGACATTAGT
GTCCAGCTTCGGCATGCGTCGGAGCAAGCCTTTGTTTGCGCCAATTCCCA
CCTTGCGGACTTTGCCCTCTGGGCCGCATTAGGTCGACGCTTTCGAGCTC
ACAATTCCAGGCGTGCTCTCACCACGCGTCGTATCCCCATATCTCCATCG
TCGCCACGGCGCGTTAGGTGTTGGAAGATAAAGCGAACCTGGTGCTTCTA
CAGAGGCTGATGGCAGTGCCTACCCTGGAGTCTTACGTGGTCAGCGGTCG
AAAGATGGTTGCTCAATGGGCGAAAATACGCTTCCAGCAGCGGAACAAAC
CGCCGGACGCTCGCGCGATGCCGCCACGCCCTCCGCCCGAAGGCGTAATA
ATAGATGAGGACAATTCTCCGAGGCGTCACCCGACCACAATACGAGGTGC
AAAGGCAGCAGTGACGACAGTGGTACCGGGAGCAGTAGCGAAAGCGGCGG
CGGCGGCGGCGGCGGCAGAGGTCGGCGACGGAGGGGCAGGAGGGGAAGAT
TGGTGGTGCGTCAAAGCCGCTGGAGGAAACGGTGGGCTGGATATCTGGGT
GTTGCATGAGGGAAATTGGAAGCCGGTGACGGAAGAGCTGAGCGATACCG
AGAGCTATGTTATTCAGGTTCGAACAGGGAAGAGCTCGCATGCACATGTA
CTGCGCCGTTTATCAAGTTCAGAAATATTGCCGACATGTTTGCTGGAGGG
GCAATGAAGGGTACGTTTTTTTAGCTGAAACGCTTTGTATATACGATTTT
TGCAGCACGGGGTCGGTTTTCTGCTGGACAAGTTGTCTGCGCATGCGCCG
TCGAAGAACGCCGTCGGCAAAGAGCGTTCGACTTGTAAATAACCAGGTTT
CTCCTTTTTCTGTTCCACACTCACCCAGGTCAGAACGGAAAGTCTTGACA
ACCATCAGCGGCTCCCCCCCCCCCCTCTCTCTCTACACGCCAATCGTGGT
GCATCCCGTCTCGTCAGCGATACGTGGCAAGACCGCTGCTTTGGCACGGG
CGGAAGTTCCACTTTCGGATGTACGCCCTCCTGCGCGCCGACATGTCCGC
GTGGCTGTACCGGACAGCCTATATTCTGCCGGCCAGCCGGCCCTACTCCA
TTGGAAGTAACACCGAGCTTGACGGGGCACCAGGAACGGGCTTTGCTGAC
GAGCTTGTGCACATCAGCAACCTCGCGGTCAACAAGCACACAGAGGGCCA
CCCGGGACAGGTCGGTCGGACCCCTGCTGCTCGTACGCAAGCAAGCAGGG
TCCATGTTGTGCAGGAAGCGTGCCTGCCGTGTTCCTTGTCTGCAGCCAGA
ACAAAAAAACCCGTCTCTCGACAATCGCCTGCACGTACATAGAGGGCCGT
GCTTTCTAAAAGCAGAAGCAGGGCTGGGTGATCGCGAAACGCGTCCGTCC
CCGCGCGAAGGAAATGGTGCTCTCGCAAGATTGGTTGCCCGTGCCTTACA
ACCCGTGCGGACCTGCACCGCGTCTCACCACACTTCTCTGGCATGATACG
CACTCCGTTCACCAGAATACCCGATGGTGGTGCGTATGTACAATACTAGT
TGTGTATGTCGACGGGAGTTTCGGCTGGGGTTGAACAATGAGCGCGACTA
GTCCATTTTTGCATCCACCCTGCCATGATCTTTGAGAGGAACACGAAACA
CGGGGCTCACGAGCCCAGCCCCCGCGACTCAAAATCAAGTATTTTTCCTT
GGCTCCTGATTTCCATCAACACTCTTCCCAAGTATCCCCCCCCCTTCTTG
ACGCGTGAGCAGCCGTCGCTCGTATGAAGGTGGCATGTATGGTATTGTAG
AGTATGGACCAGACCGTTGGACGTAAAGCTATAAAACCCACCGCTCAAGA
TGCTTTCACGGAGAGGTACGTGTCAGTTTGAGAGGCTAGGTCACATGCCG
AGTGAACAAGTTTTGACATCAGGACCACTTCTTCAGCGCTGTGTTTACCT
GTCTTATGCACATCCCTTGCCTTGTCTGCCCTTGCTTTGCCCACGGACTG
CTCTCCCGTGAGAAACCAATAGCGTGGGTGGACCTTCGGGTATCGATACT
CTCGGGGGTCGGCAGCTGGTTATTCGTCTTGACCTTCAGCTTATAGTGCA
GTGATCGGGTCTGCCCCACGTTGGTCTTATAAGCCCCATCCCCGTAATAT
CGACCCTAACGCATCTACCTGCCGGCAGGTGCCTTGTGAGCTCCCCACCG
AGTACCCTGATTTGTGGCCGGAAATGCTCGAGCTGTTGCGGTCTCTGGTC
CAAGCGGCGACGCCGTTCATGCAGCACCAGGCTAACCCGAACCACTTCGA
GTTTCTAGGGTTGGATGTCATCGCGGACCGTGCGGGAGGGGTGTGGCTTA
TGGAGGGTGAGACACACTCGTGTCGTTGCTCTCGGGTTGTGCCTGTCGTC
GCAGACCGTGCGTCGGAGAGCAGCCTGGCCAGTGGCGGGGGCGAACTTAA
GCTTCTGTACCGCATTTGGTGTCATTTAATTTCCAGGGTCGCGGCAGTAG
TGCTGTTGTGTTGCCGGGTTGTGGGTAGTCCCCCTCGGGCATCGGCAACG
CGGCCTTGTGTGCTTATAGGTAAGTGCCCCGCGATTGCGCCATTGGCCCA
TGATACAGCCAAGGAGGTCGGCTCAAAGCATGGGTGTGCGGATAGAAATC
GCGTGTCACGGAAGATGAGTATCCCGCATGCACATCACAGCCAGTAGTAT
CGATGTGCGTTGTGTAAAATGGGTGTACCAAGTAACTCTACTACTACTGC
TGTAGCTGACAACTGGTTTCGAATCTGCTGCTGTCGCAACTGCTGGGCCT
CCGTGTGTCACCCTATGCCCGGGCTGTCAGCAAACCGGTTGCCTGGACTG
CAGAGCTCCAAGCAAAACCTGGAGGAAGAGAACCAGGTCTATGACGGGAT
GATGCGGGACATCCTCCGGCTTTTGGTGCTTCCGGCGCTCACTGGCTGTC
CGCCCGAACCGGGACGATTTGAGGTTAGTGCGCGCACTTGGCCATCCATA
CACCGCCTCGGTCAAAGCCTGCTCTGTTCTTAACGGCACAGACGGGGAAC
TTGGTTGGACAGCTTTTTAGGACCCGGCACAATTGTAAGCATCGACACTG
GCGCGAGATTTAGACAGTGCATGTTGTCTTCACATCAAAAACCGTTCCGA
TCTCTCTATTCAGTACACCTCCATGAGTCCGTACTATTCCAACTCTGACG
CGGTCATATCCCGTGGTCACAGGATAACTTGCCCCAAAAGGTTATATAGA
CTACTGAAAAATGAAAAAAATATAATGGACCCGAGGCAAAGCACAAAACA
AAAGATCAGATGCAGATAGTCTGGAGCCCTCCGCTCCCCTCTACACGCTA
TGCGAGGTGAAAACAAAAGTGGACAAGCCAACATCACCAACCGCGGGGGG
ATACGCCCCCTGGTTCTATCTTGGTTCCCCAAACAATGCCGGGGTATTCC
GCGCCGGGTTCTCGCCGGCCAGGCCACAGTAGTAGCGTCAGTGTAACCCT
GCATCATGTCTACACCAGCTACTGCTGTTTTCCGTAGTCTTGGAATAAAG
TCTGACATGAGCTATTTAGCGCAGAAAAAGCGACAGAAATGTGCACCTAC
TCTGTACCGCGCCTCGGCGTAGCTTCGATTGCCATGGATGATGGAAGGAA
GGGGCTAAGTACGACACTCGTGGTGTGGTGTGCGTGCCGACTCTGATCGG
TTCTACTGCCGCTAGCATGCTGTCTTTCTTGTTCGGGGTGATCTTGATTG
TTTTGCTGGCGTTGCGCGCGCCATTCCTCTACTATGTAGTCACAAAAAAA
CTGTTGCTTCGCCTACTCGGGCGCTAATTTGTGCACACGCGCCAACTGTG
ACTTGGTTTTTCAGGCTGCCGCCGAGCCGGCTTCGGGTGCAACAGCGCCA
TCCACAGAAACGTGGAGGAACGTCATGCGCTTCGCAGCTTTTAAACGATC
TTCCAGGACTAGAACGTCTCTGTCGTGATGAGTGCTCTTCAAGTGCTCTA
CTTTCGTATTCATTTTAAGCAGGGATGTTCACGAGTCGGATTGCAAGATG
TACAACTTTGAGCCGTCCGTGCCTCTTGGGCGTAGGCTGAGAACCCACTG
CTCTCGGCCGAATGGGTGCGCTTCGTTAGACATCTTGGATTTGGAGAGAA
TTACAAGGGTGCTCGTGGCGGCACGCTGACGCGACCCGCCGCGACGCTCG
TAGGCTGCAGGACGGTGTCAAGTGTTGTAGTGGGGGGAAATTGTGTGGAA
AGTGCAAAAGGAACAAATGTACTGTAGGTCTTGAGGGTCGCAGCCCAGCA
CACCGAGCAACCGGCAGAGGAAAATCTCGCAATTTCTACTGTAAAAAAGG
TCGATTTGTTGTGTCGGAGATGGTTTTAAACGATTAAATCAACGGCGAAG
AGCTATTTGATTGATCATTACCACAAAAACATATTATTCCAACCACTGCT
TAAGACCACCGAAAGATTTGTCGCCGCCCGATCTCCTTGTTCGCATCGGG
CATTCGCTTCCGAATCCGATAGCTGTGGCGGTGGTACTGAAGTACATAAT
AATGAGAGAAGAAACTACATAGTGCAAGCAAGGTCGCGTGAGCGTTTCCA
GGGTCGTGCCGGCAGCGGCGGTTACATGTGAAATTTACGGGTAATTACCC
CAAAATGCACCGGATAAATTATCAGGCGAAAATAATTTCCCGTACAAATT
ATTGTTTGTTGGCAAATTTAGGTAAATTCTGCGGCGTTGCGATCCTCGCG
CGGGGTTGTGACCCTCGCATATAAAGTCGAGGTATCGCGAGCTCGTCTCC
GCAGCAATCGCTCCTAAAAGAGTAAAGTAACAGTTCCGTATGTGGAAAAG
AGGGTTTCGTCCTCGACAGACGTTAGTGTGATCCGACCCTTTATGAGGGT
GGTACCCCCATTACCCCCCCCCCTTTTTTCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7249:721..6503-

>mRNA_L-elsbetiae_contig7249.16112.1 ID=mRNA_L-elsbetiae_contig7249.16112.1|Name=mRNA_L-elsbetiae_contig7249.16112.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2616bp|location=Sequence derived from alignment at L-elsbetiae_contig7249:721..6503- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTGAACAAGGGCCATCTTGTGACAATGGGTCGAGATGACTCGCTGCG
GGACTTTCCATCTATCCCAGCAGCCGAGCAACAGACGACGGGGGCGGCGG
CGGCGGCGGCGGAAACTCTCAAAGATCGTGATCTAACGTTCGACAGCCGG
CACCCCCTGACCTTCAGAGTGACGGGAGCTGCTTCAGTAGCTCGCTTAGA
GCCGCTTCTCCTTAACCACCACCAGGAAGACCGCCGGAAAGGTATCTGGC
ATCGCGCTCTCAGCAGCGGCGGGGGCGGTGGAAATAGTCCTGCTTCTAAT
GCTCAGCTTGATTTCGTGTGGGAGACCACCGTTACCAAGGAACAGCACCA
ACAGCACCGGAACGCCAGGGTGCTGAACCGCCTCAACGGCGCGCAGATGT
TGAACAAGGGCCATCTTGTGACAATGGGTCGAGATGACTCGCTGCGGGAC
TTTCCATCTATCCCAGCAGCCGAGCAACAGACGACGGGGGCGGCGGCGGC
GGCGGCGGAAACTCTCAAAGATCGTGATCTAACGTTCGACAGCCGGCACC
CCCTGACCTTCAGAGTGACGGGAGCTGCTTCAGTAGCTCGCTTAGAGCCG
CTTCTCCTTAACCACCACCAGGAAGACCGCCGGAAAGGTATCTGGCATCG
CGCTCTCAGCAGCGGCGGGGGCGGTGGAAATAGTCCTGCTTCTAATGCTC
AGCTTGATTTCGTGTGGGAGACCACCGTTACCAAGGAACAGCACCAACAG
CACCGGAACGCCAGGGTGCTGAACCGCCTCAACGGCGCGCAGGTGTTGGA
AGATAAAGCGAACCTGGTGCTTCTACAGAGGCTGATGGCAGTGCCTACCC
TGGAGTCTTACGTGGTCAGCGGTCGAAAGATGGTTGCTCAATGGGCGAAA
ATACGCTTCCAGCAGCGGAACAAACCGCCGGACGCTCGCGCGATGCCGCC
ACGCCCTCCGCCCGAAGGCGTAATAATAGATGAGGACAATTCTCCGAGGC
GTCACCCGACCACAATACGAGGTGCAAAGGCAGCAGTGACGACAGTGGTA
CCGGGAGCAGTAGCGAAAGCGGCGGCGGCGGCGGCGGCGGCAGAGGTCGG
CGACGGAGGGGCAGGAGGGGAAGATTGGTGGTGCGTCAAAGCCGCTGGAG
GAAACGGTGGGCTGGATATCTGGGTGTTGCATGAGGGAAATTGGAAGCCG
GTGACGGAAGAGCTGAGCGATACCGAGAGCTATGTTATTCAGGTGTTGGA
AGATAAAGCGAACCTGGTGCTTCTACAGAGGCTGATGGCAGTGCCTACCC
TGGAGTCTTACGTGGTCAGCGGTCGAAAGATGGTTGCTCAATGGGCGAAA
ATACGCTTCCAGCAGCGGAACAAACCGCCGGACGCTCGCGCGATGCCGCC
ACGCCCTCCGCCCGAAGGCGTAATAATAGATGAGGACAATTCTCCGAGGC
GTCACCCGACCACAATACGAGGTGCAAAGGCAGCAGTGACGACAGTGGTA
CCGGGAGCAGTAGCGAAAGCGGCGGCGGCGGCGGCGGCGGCAGAGGTCGG
CGACGGAGGGGCAGGAGGGGAAGATTGGTGGTGCGTCAAAGCCGCTGGAG
GAAACGGTGGGCTGGATATCTGGGTGTTGCATGAGGGAAATTGGAAGCCG
GTGACGGAAGAGCTGAGCGATACCGAGAGCTATGTTATTCAGGTCAGAAC
GGAAAGTCTTGACAACCATCAGCGGCTCCCCCCCCCCCCTCTCTCTCTAC
ACGCCAATCGTGGTGCATCCCGTCTCGTCAGCGATACGTGGCAAGACCGC
TGCTTTGGCACGGGCGGAAGTTCCACTTTCGGATGTACGCCCTCCTGCGC
GCCGACATGTCCGCGTGGCTGTACCGGACAGCCTATATTCTGCCGGCCAG
CCGGCCCTACTCCATTGGAAGTAACACCGAGCTTGACGGGGCACCAGGAA
CGGGCTTTGCTGACGAGCTTGTGCACATCAGCAACCTCGCGGTCAACAAG
CACACAGAGGGCCACCCGGGACAGGTCAGAACGGAAAGTCTTGACAACCA
TCAGCGGCTCCCCCCCCCCCCTCTCTCTCTACACGCCAATCGTGGTGCAT
CCCGTCTCGTCAGCGATACGTGGCAAGACCGCTGCTTTGGCACGGGCGGA
AGTTCCACTTTCGGATGTACGCCCTCCTGCGCGCCGACATGTCCGCGTGG
CTGTACCGGACAGCCTATATTCTGCCGGCCAGCCGGCCCTACTCCATTGG
AAGTAACACCGAGCTTGACGGGGCACCAGGAACGGGCTTTGCTGACGAGC
TTGTGCACATCAGCAACCTCGCGGTCAACAAGCACACAGAGGGCCACCCG
GGACAGGTGCCTTGTGAGCTCCCCACCGAGTACCCTGATTTGTGGCCGGA
AATGCTCGAGCTGTTGCGGTCTCTGGTCCAAGCGGCGACGCCGTTCATGC
AGCACCAGGCTAACCCGAACCACTTCGAGTTTCTAGGTGCCTTGTGAGCT
CCCCACCGAGTACCCTGATTTGTGGCCGGAAATGCTCGAGCTGTTGCGGT
CTCTGGTCCAAGCGGCGACGCCGTTCATGCAGCACCAGGCTAACCCGAAC
CACTTCGAGTTTCTAG
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