prot_L-elsbetiae_contig7239.16101.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7239.16101.1
Unique Nameprot_L-elsbetiae_contig7239.16101.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length109
Homology
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: A0A6H5L829_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L829_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 4.300e-16
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 0
Query:   37 DKARQAAEDEAKE-ELCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSAN---CPTCRIAFKKITKTLTGDDI 107
            ++ ++AA D+AK+ ELC IC E LP + RG+I CGH FCF CIH W+  S +   CP+CR+ F KI KTL+  D+
Sbjct:   42 ERTKKAAADDAKKGELCIICQEALPDIERGIIACGHTFCFGCIHTWSSRSGDSVLCPSCRVPFNKIKKTLSPKDV 116          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: D7FGW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW0_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 8.280e-16
Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   37 DKARQAAEDEAKE-ELCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQT---SANCPTCRIAFKKITKTLTGDDI 107
            ++ R+AA D+AK+ ELC IC E LP + RG+I CGH FCF CIH W      SA CP+CR  F KI KTL+  DI
Sbjct:   42 ERTRKAAADDAKKGELCIICLEALPDIERGIIACGHTFCFGCIHDWASNRGDSALCPSCRFPFNKIKKTLSPKDI 116          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: A0A6H5K2A7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A7_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.570e-15
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   51 LCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSANCPTCRIAFKKITKTLTGDDIAE 109
            +C IC + LP + RGV+ CGHVFCF+CIH WT+ S+ CP CR+  K+ITKTL+  D A+
Sbjct:   79 MCAICCDKLPDLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAK 137          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: D7FGV7_ECTSI (Similar to PHD finger family protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV7_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 6.720e-15
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0
Query:   51 LCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSANCPTCRIAFKKITKTLTGDDIAE 109
            +C IC + LP + RGV+ CGHVFCF+CIH WT+ S+ CP CR+  K+ITKTL+  D A+
Sbjct:  175 MCAICCDKLPNLERGVLSCGHVFCFACIHQWTKNSSICPGCRVQIKRITKTLSPADEAK 233          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: A0A1R2BZC3_9CILI (RING-type domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BZC3_9CILI)

HSP 1 Score: 62.4 bits (150), Expect = 2.430e-10
Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 0
Query:   50 ELCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSANCPTCRIAFKKITK 100
            +LC ICY  +   G  V  CGH+FCFSCIH W++T   CP C+  F KITK
Sbjct:   10 DLCAICYNQIELQGC-VDSCGHLFCFSCIHKWSETENTCPICKARFFKITK 59          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: A0A6P4BUW5_ARADU (uncharacterized protein LOC107471428 n=9 Tax=Arachis TaxID=3817 RepID=A0A6P4BUW5_ARADU)

HSP 1 Score: 56.6 bits (135), Expect = 4.770e-7
Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 0
Query:   47 AKEELCPICYEILPAMGRGVIPCGHVFCFSCIHLW------TQTSANCPTCRIAFKKITKTLTGDDI 107
            + E  C IC+    A  RG++PCGH FCF CIH W      T+ +A CP C+ +F+ I K    D I
Sbjct:  290 SSELSCVICHADFSAT-RGILPCGHRFCFECIHSWANHRTSTRKNATCPLCKASFQSIKKVEHADRI 355          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: UPI0010A49F90 (E3 ubiquitin-protein ligase RNF126-like n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A49F90)

HSP 1 Score: 53.5 bits (127), Expect = 1.370e-6
Identity = 24/48 (50.00%), Postives = 27/48 (56.25%), Query Frame = 0
Query:   51 LCPICYEILPAMG-RGVIPCGHVFCFSCIHLWTQTSAN--CPTCRIAF 95
            +CPIC E     G  G +PCGH FCF CIH+W     N  CP CR  F
Sbjct:   13 ICPICKEEFKLGGDAGKLPCGHFFCFECIHVWLNFDQNDTCPVCRRPF 60          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: UPI00201F67D8 (peroxisome biogenesis factor 10-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI00201F67D8)

HSP 1 Score: 55.1 bits (131), Expect = 1.440e-6
Identity = 25/50 (50.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:   49 EELCPICYEILPAMGRG---VIPCGHVFCFSCIHLWTQTSANCPTCRIAF 95
            +  CP+C E     GR    V PCGH+FC+ CIH W QT A CP CR  F
Sbjct:  243 DRKCPLCLE-----GRQFSTVTPCGHLFCWKCIHEWCQTKAECPLCRDQF 287          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: UPI0009E26718 (uncharacterized protein LOC110019553 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E26718)

HSP 1 Score: 54.7 bits (130), Expect = 2.270e-6
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0
Query:   45 DEAKEELCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSAN------CPTCRIAFKKITK 100
            D+  E  C IC+    ++ RGV+PCGH FC+SCI +W    A+      CP C+  F  ITK
Sbjct:  297 DQQTEPSCVICWTEFCSL-RGVLPCGHRFCYSCIQVWADCMASKGKVSACPLCKANFTSITK 357          
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Match: A0A835YZ14_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ14_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.140e-6
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 0
Query:   42 AAEDEAKEELCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSANCPTCRIAFKKI 98
            A +  A  E C IC+E LP   +GV+ CGH +CF CI  W++T   CP C+  +  I
Sbjct:   61 AGDPGAAAEACSICFE-LPTK-KGVLKCGHFYCFDCIMEWSKTETTCPLCKARYTSI 115          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7239.16101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L829_9PHAE4.300e-1650.67RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGW0_ECTSI8.280e-1654.67RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K2A7_9PHAE4.570e-1555.93RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FGV7_ECTSI6.720e-1555.93Similar to PHD finger family protein, partial n=1 ... [more]
A0A1R2BZC3_9CILI2.430e-1052.94RING-type domain-containing protein n=2 Tax=Stento... [more]
A0A6P4BUW5_ARADU4.770e-741.79uncharacterized protein LOC107471428 n=9 Tax=Arach... [more]
UPI0010A49F901.370e-650.00E3 ubiquitin-protein ligase RNF126-like n=1 Tax=Pr... [more]
UPI00201F67D81.440e-650.00peroxisome biogenesis factor 10-like n=2 Tax=Halio... [more]
UPI0009E267182.270e-641.94uncharacterized protein LOC110019553 n=1 Tax=Phala... [more]
A0A835YZ14_9STRA3.140e-642.11RING-type domain-containing protein n=1 Tax=Tribon... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 52..91
e-value: 2.9E-7
score: 40.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 52..92
e-value: 3.2E-10
score: 40.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 52..92
score: 13.448
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 30..106
e-value: 2.5E-16
score: 61.5
NoneNo IPR availablePANTHERPTHR22763:SF162coord: 44..98
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 44..98
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 44..99
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 69..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7239contigL-elsbetiae_contig7239:2546..4456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7239.16101.1mRNA_L-elsbetiae_contig7239.16101.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7239 2534..4456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7239.16101.1 ID=prot_L-elsbetiae_contig7239.16101.1|Name=mRNA_L-elsbetiae_contig7239.16101.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp
MASAMVSPPVVAGPSGNGKGSGSAAPLPEGATSGMSDKARQAAEDEAKEE
LCPICYEILPAMGRGVIPCGHVFCFSCIHLWTQTSANCPTCRIAFKKITK
TLTGDDIAE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS