mRNA_L-elsbetiae_contig723.16086.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig723.16086.1
Unique NamemRNA_L-elsbetiae_contig723.16086.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig723.16086.1 vs. uniprot
Match: D8LM12_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM12_ECTSI)

HSP 1 Score: 598 bits (1541), Expect = 4.560e-201
Identity = 386/668 (57.78%), Postives = 419/668 (62.72%), Query Frame = 1 
Query:  493 EEVWARGQRHVKISKLYLKGLLKRGPNIFVALAWSQAFWLFLEATAGNADSRGYVRLSSVACYALTLHTGGHLVLSRYSSGRHKLSHHALEFLLDLITDVVGFAWINFAEEMLAQACIYLRFRASHASTYDLKHASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQVFEVRAKTTLMYAVLAFAASLGAMEAGSVARGLLDWPVDFEETANQFDAGSFALPTSWLITQAVHIGLYGFFYRTAGGQGGRDGGSRGDGDDVVDIRPAASLFLLAYALLCSVVATRVVGGTVAASAIAVDGSATIDGXXXXXXXXXXX-----RNDLVIQAISSYEVTAAQATDAEVTTPGAXXXXXXXXXXXERSQAAPSAFSRGAGS-SHPGREPSLKPDDDGGEGHGSASLAAEALVA--------AAATAEAGRVRRQSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAIAYASLSTALGVCIMVRGADKLDARIRGDRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRTAGEXXXXXXXXXXAEMYRD---ALRSFHARRLLVVVGGVSLVVGWAWEEAFDLVLEGLVGEKADAGTVLAKLALAFVSTAVVLGREVRAAAGHGRHGGT-SGGRAAGETGVGDELREPLVAT 2442
            +EV+A+G+RH+KISKLYLKGLLKRGPNIFVALAWSQAFWL LEATAGN DSRGYVRLSSVACYAL LH GGHL+L RYSSGR KLSHHALEFLLDL+TDVVGFAWIN AEEMLAQ                                                           VFEVRAKTTL+YA LAFAASLGAME GS+AR LLDWPV FEETANQFDAGSFALPTSWL+TQ VHIGLYGFFYRTAGGQGGR  G  G+ DDVVD+R AASLFLLAYALLCS +ATRV+GGTVAA             XXXX            R+DLVI+AISSY VTAAQA+DA       XX                +++  G G  +  G   S K  D GGE  G+A LA              AA   +A   RR SLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGA AYA+LSTALGVC+MVRGADKL    R    A                              R  G            E  R    A+RS+HARRLLVVVGGVSLVVGWAWEEAFDL LEGL+G++ADA TV+AKL+LA  +T VVLGREVR A      GG       AGE G G  L EPLV T
Sbjct:    2 DEVYAKGRRHLKISKLYLKGLLKRGPNIFVALAWSQAFWLILEATAGNEDSRGYVRLSSVACYALALHAGGHLLLHRYSSGRRKLSHHALEFLLDLVTDVVGFAWINVAEEMLAQ-----------------------------------------------------------VFEVRAKTTLVYAALAFAASLGAMELGSLARSLLDWPVGFEETANQFDAGSFALPTSWLVTQGVHIGLYGFFYRTAGGQGGR--GGDGEEDDVVDVRLAASLFLLAYALLCSALATRVIGGTVAAXXXXXXXXXXXXXXXXXLTRSNSGGSTGSRSDLVIRAISSYGVTAAQASDAAXXXXXXXXGDVEASSTPSCGGGRNTSYREGGGDVADVGPSNSTKVGDGGGE-RGAAPLAXXXXXXXXXXXXXXAAGGEDA---RRDSLRRGLKAYMRLTVGMMVGWAYNLWGQVEFRQEELEFRFGPALGAAAYAALSTALGVCVMVRGADKLAGSNRRKNGAGGAVNDSVGGALGS----------------RPGGGYFHVERPEEDGEETRRRDAAVRSYHARRLLVVVGGVSLVVGWAWEEAFDLALEGLLGDEADAATVVAKLSLAVAATVVVLGREVRRAGRRDAGGGDLHDHNGAGEGGGG--LLEPLVPT 586
[Close]
BLAST of mRNA_L-elsbetiae_contig723.16086.1 vs. uniprot
Match: D8LM13_ECTSI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM13_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 1.660e-16
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = -1 
Query:  221 SATGSLDAGCWSGHGKIATVVNGLTFRSSFDSGNLARVILPAEQGGVGGVYQLWTAR 391
            SA    +AGCW G GKI TVVNGLTFRS++ SGNLARV+LPAEQGGVGGVYQLWTAR
Sbjct:   16 SAAPCSNAGCWEGPGKITTVVNGLTFRSTWCSGNLARVVLPAEQGGVGGVYQLWTAR 72
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig723.16086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM12_ECTSI4.560e-20157.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LM13_ECTSI1.660e-1678.95Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig723contigL-elsbetiae_contig723:11277..16675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_002440.1
Exons5
Model size2914
Cds size2010
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816805.3826628-UTR-L-elsbetiae_contig723:11276..116541622816805.3826628-UTR-L-elsbetiae_contig723:11276..11654Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig723 11277..11654 +
1691683826.8506677-UTR-L-elsbetiae_contig723:11276..116541691683826.8506677-UTR-L-elsbetiae_contig723:11276..11654Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig723 11277..11654 +
1622816805.393864-UTR-L-elsbetiae_contig723:12093..121741622816805.393864-UTR-L-elsbetiae_contig723:12093..12174Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig723 12094..12174 +
1691683826.8630612-UTR-L-elsbetiae_contig723:12093..121741691683826.8630612-UTR-L-elsbetiae_contig723:12093..12174Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig723 12094..12174 +
1622816805.4480743-UTR-L-elsbetiae_contig723:16230..166751622816805.4480743-UTR-L-elsbetiae_contig723:16230..16675Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig723 16231..16675 +
1691683826.9315135-UTR-L-elsbetiae_contig723:16230..166751691683826.9315135-UTR-L-elsbetiae_contig723:16230..16675Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig723 16231..16675 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816805.4061933-CDS-L-elsbetiae_contig723:12174..123151622816805.4061933-CDS-L-elsbetiae_contig723:12174..12315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 12175..12315 +
1691683826.8771503-CDS-L-elsbetiae_contig723:12174..123151691683826.8771503-CDS-L-elsbetiae_contig723:12174..12315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 12175..12315 +
1622816805.4195228-CDS-L-elsbetiae_contig723:12976..135601622816805.4195228-CDS-L-elsbetiae_contig723:12976..13560Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 12977..13560 +
1691683826.888343-CDS-L-elsbetiae_contig723:12976..135601691683826.888343-CDS-L-elsbetiae_contig723:12976..13560Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 12977..13560 +
1622816805.4291987-CDS-L-elsbetiae_contig723:14577..152051622816805.4291987-CDS-L-elsbetiae_contig723:14577..15205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 14578..15205 +
1691683826.9014018-CDS-L-elsbetiae_contig723:14577..152051691683826.9014018-CDS-L-elsbetiae_contig723:14577..15205Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 14578..15205 +
1622816805.4383593-CDS-L-elsbetiae_contig723:15573..162301622816805.4383593-CDS-L-elsbetiae_contig723:15573..16230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 15574..16230 +
1691683826.9190538-CDS-L-elsbetiae_contig723:15573..162301691683826.9190538-CDS-L-elsbetiae_contig723:15573..16230Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig723 15574..16230 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig723.16086.1prot_L-elsbetiae_contig723.16086.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig723 12175..16230 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig723.16086.1

>prot_L-elsbetiae_contig723.16086.1 ID=prot_L-elsbetiae_contig723.16086.1|Name=mRNA_L-elsbetiae_contig723.16086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=670bp
MKCDTHMSSGFEEVWARGQRHVKISKLYLKGLLKRGPNIFVALAWSQAFW
LFLEATAGNADSRGYVRLSSVACYALTLHTGGHLVLSRYSSGRHKLSHHA
LEFLLDLITDVVGFAWINFAEEMLAQACIYLRFRASHASTYDLKHASAAA
AAAVIGAAPMVLAVLLLCFTDIISPVLSPPPPPAQVFEVRAKTTLMYAVL
AFAASLGAMEAGSVARGLLDWPVDFEETANQFDAGSFALPTSWLITQAVH
IGLYGFFYRTAGGQGGRDGGSRGDGDDVVDIRPAASLFLLAYALLCSVVA
TRVVGGTVAASAIAVDGSATIDGGGGGGGGDSSSRNDLVIQAISSYEVTA
AQATDAEVTTPGASAAAAAAAAAAERSQAAPSAFSRGAGSSHPGREPSLK
PDDDGGEGHGSASLAAEALVAAAATAEAGRVRRQSLRRGLKAYMRLTVGM
MVGWAYNLWGQVEFRQEELEFRFGPALGAIAYASLSTALGVCIMVRGADK
LDARIRGDRAAAAAAAPGAVNGDGGGGGGFGSGLGGAGRGHRTAGEEEEA
AAAAAAAEMYRDALRSFHARRLLVVVGGVSLVVGWAWEEAFDLVLEGLVG
EKADAGTVLAKLALAFVSTAVVLGREVRAAAGHGRHGGTSGGRAAGETGV
GDELREPLVATDGRGAAVL*
back to top

mRNA from alignment at L-elsbetiae_contig723:11277..16675+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig723.16086.1 ID=mRNA_L-elsbetiae_contig723.16086.1|Name=mRNA_L-elsbetiae_contig723.16086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5399bp|location=Sequence derived from alignment at L-elsbetiae_contig723:11277..16675+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAGAGTGGTGTGGATAGTTTTTGCGTTTGGACGTGCTTCGTACGTTCG
GCCTGCTATGTACAAGAATAAGAATGTATGTAACATTTAGTTTTGCGCAC
ACAGGGTACATGTTACACGAATATAACACAGGAGAACCCGGACGTACAAG
GTGGTACATACGGTTCTCTTGAAAAACGCCCTCCCGCCGGGAGCAAATTT
GAAATATGCCATCAAGCTCACCTGGCAGTCCACAGCTGATACACCCCACC
CACACCCCCCTGCTCTGCAGGTAGGATCACACGAGCGAGATTTCCACTGT
CGAAGCTCGACCTAAAAGTAAGGCCATTGACCACGGTGGCGATTTTCCCG
TGCCCACTCCAGCATCCTGCATCCAAAGGTATAGCCGATGAAGGAAGCAT
GGTCTAACCCGAGAAGCAAAGCACGCCGAGTACCCCACCACCAAACGGTG
AATGTGATCTATGGCACCCCACCACCAAACCAGATCATATCTCGTACCAT
AGATCACATTCACCGTTCAATGGCTTCCCCATTTCTTCCAATGAGGGATG
CAGTGATTGCACCTGAACTTGCGTGTTTTTAGTTGGTGCAGCCGGTTTGC
TGTCGATCTGTCGATACCAGATGTAGAAAAACCGGCGTAAGTTTCGGCGG
CGAGTTTTCGAAAATGGTTCCCATCCTCCGAACCGATACCTGCTGGGTTT
AAAACCAAACGGGCGATGTCGGGATCAGATGCGGGCTTTGTGTGTTTCTG
TGTTGCAGTCCAATACTGCAGCAGACACCAGCCTTCGCTTCCTCGCATCG
CTGTCTGTCTGCTTCAGACCCCGTCGCTGAATTGCTTCGTGCTTTCATCC
GAGGACACAGCCGAGGTATTTCATCGTATTATTTCGCTCCGGGGTTGAAT
GAAGTGTGACACCCACATGTCTTCTGGTTTCGAGGAGGTGTGGGCAAGAG
GGCAGAGGCACGTCAAAATCTCCAAGCTCTACCTCAAGGGCTTGTTGAAA
CGGGGACCAAACATTTTCGTTGCGCTTGCATGGTCTCAGGTAAGCCTTTC
CTGTGTGATCCGGTCCCCTCTGTGTATTTAGCCGCTCTAAAACAAGCAAT
ATTAGACTAGACTTGTAGTAACTAGAAGTAGACGACTTACACAGACCGTT
TACGACACACGATAACACACCCCCTGGACCGATTCCCAAAGCTCAAGTAT
TCAACAGCGAGAAGAGTGTCGGTTCCAAAAAGGGCGGCGCTGGAAACATC
CCATCAAGAGCTGCCCGAAAACGTGTCGTTTAGTAGTAGAATCATAATCC
GTTGCGGAGTAACCGAGCTTTGAAAATCGGCCCAGGGGGTGTGTTCATCT
CTTGTCGTATACGGTACTGCTGTAGTCCTGGATACATAGACTGCCAATAG
TTGACTCCAAAATGTGCCGCGGGCCCAACAAACAACAGCACGAGCAGCAG
TATTGTACTCATAATATAGTCTTGGTTGGTCGGAGTTGGATCGTCGGGTA
GGCCATTGCCAGCAAGGACTGGCCCACACAACAGCGAGAATACCTCCTTC
CCCAGGGCCTTACTTTCGCGGAGTGGCCATGCCCGCGCCCGATCTCCGAT
TACGCCTCCCAAAGCTTCCCTCGCCGAGCCCTCGGTACACGATTGATCTC
CCCACTCCGTCCTATGCACGCTCACGTGGACGTTGTCATGCACCGAACAG
GCGTTTTGGCTTTTCCTCGAAGCAACGGCCGGGAACGCGGACAGCCGAGG
GTATGTACGACTTAGTAGCGTGGCGTGCTACGCTCTCACCCTGCACACGG
GGGGCCACCTGGTGCTGAGCCGCTACAGCAGCGGCCGGCACAAGCTGAGC
CACCACGCGCTCGAGTTCCTCCTGGATCTCATCACGGACGTCGTGGGCTT
CGCCTGGATCAATTTTGCCGAGGAAATGCTGGCACAGGCATGTATCTACT
TGCGCTTCAGAGCGAGCCACGCATCAACATACGATTTGAAACACGCATCA
GCTGCTGCCGCTGCTGCTGTCATAGGTGCTGCGCCGATGGTTCTGGCTGT
CCTTCTTCTCTGTTTCACAGACATAATTTCCCCCGTGCTTTCGCCCCCCC
CCCCTCCTGCGCAGGTGTTCGAGGTGAGGGCGAAAACTACGCTCATGTAC
GCAGTGCTGGCGTTCGCCGCAAGCCTGGGAGCTATGGAGGCCGGCTCTGT
CGCCCGAGGCCTGCTGGACTGGCCGGTGGACTTCGAAGAAACGGCGAACC
AGTTCGATGCGGGCTCGTTCGCTCTGCCTACCAGGTTCGTCGTGCTTGAA
TGTGTCTCTTAGGAGTGGTTAGTTACACATACTCCATATGTAGTTCCGCA
GCAGTATCATGGTATCAAGTGCTTGTCAAGTAAGTGAGAACGTTTTTCGT
TTCGTGGTGAAGCACAGCAAGTGTGAGAAAAACAACAATAAACGAACAGC
AACAACAACAACAACAGCAGCAGCAGCAGCAGTAGCAGTAGCAGCAGCAG
CAGCAGCAGAGGAGCGCAGGAAGCAACATACCACATTGTCTTGGAGGAGC
CGCATATATATATATGTATCAGGGCGGGCGTTCACGCAAAAGAGGTTGTC
TTCTTGTTGAAACTGCCGTTCCGTTGCCGTCCAACTGCACAAGACTAGTA
GAACCACCCGCTCTGCGCAAAAGGTTGGCTTTGTGTCTTTTTCAGGGCGC
AACGAATGCCGATCCCACAGCCACCGCCACGAGCACACAGGGAGGCACTC
TTTTCTGCCCTTTCTGGCAAAGTGGAAGCTGTATAGCTTGCGAATATTTT
CGCACGAATGGGTTCTTCGGAGTGGACTCAGGCGGGGCGCTTCGCTCCCA
CACAGATCGCCCCTTCAGGAGGAGGGCGAGAGCCGAGGCGCTGCTTTGGC
GTTTATTTTATTTTATTTCAAAATAAACAATGAATCAAAGATGGAACCTA
ACCCACACTAGAGCAAGGACTCGATATGGGATTCAAAACGGTATTCCATA
CAGAGACGTAATATTTGGCGAAGCGAGCAGAAAAACAAACCTACAATATC
AGAAGAGTCCAACATCTCCCCTGCAAAGATTTGCGATTTTCCTGCATGTG
TAGTGCTGAATCGTCCCCGAGCGCACACCGGCCGCGATGTCACGTGGGCG
ATCATCCCGAGTATCATGACACCGTTTTCCGGCCCCGGTACGGTTCGTGA
ACGCCTTGTAAATGCACACGTAAGTTTATTTCCGTCTTTGTCTGTCTCTC
TTTTTCTCTCTCTCTCTCTTCCTGTCGCCCGCGTTCCTCCTCGATCGACA
GTTGGTTGATCACGCAGGCCGTGCATATCGGGCTCTACGGATTTTTCTAT
CGTACGGCCGGAGGGCAAGGCGGTCGGGATGGCGGCAGCAGGGGCGATGG
AGATGACGTCGTCGACATCCGCCCGGCGGCTTCGTTGTTCCTCCTCGCGT
ATGCCCTCCTTTGCTCCGTGGTCGCCACTCGCGTGGTTGGTGGAACGGTG
GCTGCTTCCGCCATTGCCGTGGACGGCTCCGCCACCATCGACGGCGGTGG
CGGCGGCGGCGGCGGCGACAGCAGCAGCCGAAACGACCTCGTGATCCAGG
CGATTTCGTCTTACGAAGTCACGGCAGCACAGGCAACGGATGCAGAAGTG
ACAACACCAGGAGCATCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGA
GAGATCCCAGGCCGCGCCGTCGGCGTTTTCTCGTGGTGCCGGGTCCAGCC
ACCCCGGGCGGGAACCTTCCCTCAAACCCGACGACGACGGTGGCGAGGGG
CACGGGTCGGCTTCACTGGCGGCGGAGGCGTTGGTCGCGGCGGCGGCGAC
GGCGGAGGCAGGCCGGGTCCGGCGGCAGTCCCTCCGTCGGGGGCTCAAGG
CCTACATGAGGCTCACCGTGGGGATGATGGTGGGCGCGCCCTTGTGTTTG
TCGTTGCTGCAGCGCAACAACAGAGAGTCCTTCCCCGCCTTCCGTTTCAA
GCAAGCACCGCTTCCCTTCATATGTACTTCCGCCGCACGAACAGAGAAGG
AGGGCAAACCGACGGGCGCGAGAGACCTGTGTAGCCGCGCAGCGTTGTCG
GATGATGCATGCTTCGTATGATATGTACCTGTTGAATGCCATCCGTTTGT
GAGTTGCGGCGATGAATGTCTGACGAGCGAGCGCGCGTTGAAATGACAAA
AACATATACATATATACATTTATATCTTGAGTCTTTTACCTTCCTCTGCA
AACGTGTGCCTATTTTCGTGCGGGCTTAACGTTTGCTTGCGGTCCAGGTG
GGCTGGGCCTACAACCTGTGGGGCCAGGTCGAGTTCCGCCAGGAGGAGCT
AGAGTTTCGCTTCGGCCCGGCCTTGGGGGCCATCGCTTACGCGTCTCTCA
GCACCGCTTTGGGCGTGTGCATCATGGTGCGAGGCGCCGACAAGCTAGAC
GCCAGAATCCGCGGCGACCGGGCGGCGGCGGCGGCGGCGGCTCCCGGTGC
GGTGAACGGCGACGGCGGTGGCGGTGGCGGATTCGGGTCCGGGCTCGGGG
GCGCTGGCCGCGGCCATCGGACGGCGGGGGAGGAGGAGGAGGCCGCGGCG
GCGGCGGCCGCCGCCGAGATGTACAGGGACGCGCTGCGGTCGTTCCACGC
GAGGCGCCTGCTCGTGGTGGTCGGCGGGGTATCCCTGGTCGTGGGGTGGG
CGTGGGAGGAAGCCTTCGACCTGGTGCTCGAGGGGTTGGTCGGCGAGAAG
GCCGACGCCGGTACCGTGTTGGCGAAGCTGGCGCTCGCGTTTGTCTCCAC
CGCGGTTGTCCTCGGGCGAGAGGTGAGGGCCGCCGCGGGACACGGCCGTC
ACGGCGGCACCTCCGGGGGGCGCGCTGCTGGAGAGACCGGCGTCGGCGAC
GAGCTGCGGGAGCCATTAGTGGCCACGGACGGCCGGGGCGCGGCAGTTCT
ATAAGGAAACCCTTCCAGGGGCGGGGGGGTTATCGAAGGCTCACTTTCTT
AATCAGTGCCTTAGTAAAGGCAAGAGTTACGTCAAGCCAATGGCAATGGG
GTGCTTCTATTCCACAAGTGTAGTTACAGCGGTATTTAGTAGTGATGTTT
ACGTTTTTCTTTTTGGGGGGCGGGAAAGAGGGGGAGTCATTTTTGTTTCG
TGTGATGGGGGCTGCTTTCAGACAGGAGTTTTGAAGTTTTGCAGGGGTGT
GGCAGGTAGTGTGTGTGCGCTTGGACGTGCTTTTCAGGTACATATGTATG
TACACAGTATAGCAGCACAGGTGTGAGGGCGTGTCATCGCTGTACATACA
TGTACGTCGTACTTGTCGTGCTTGCTTTGTCACCACCCGCCCGATGCTTG
ATCGGCGTACCTATTTACTACGCCGTTTTCCACAAGAAGTGCTTATATG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig723:11277..16675+

>mRNA_L-elsbetiae_contig723.16086.1 ID=mRNA_L-elsbetiae_contig723.16086.1|Name=mRNA_L-elsbetiae_contig723.16086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4020bp|location=Sequence derived from alignment at L-elsbetiae_contig723:11277..16675+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGTGTGACACCCACATGTCTTCTGGTTTCGAGGAGGTGTGGGCAAG
AGGGCAGAGGCACGTCAAAATCTCCAAGCTCTACCTCAAGGGCTTGTTGA
AACGGGGACCAAACATTTTCGTTGCGCTTGCATGGTCTCAGATGAAGTGT
GACACCCACATGTCTTCTGGTTTCGAGGAGGTGTGGGCAAGAGGGCAGAG
GCACGTCAAAATCTCCAAGCTCTACCTCAAGGGCTTGTTGAAACGGGGAC
CAAACATTTTCGTTGCGCTTGCATGGTCTCAGGCGTTTTGGCTTTTCCTC
GAAGCAACGGCCGGGAACGCGGACAGCCGAGGGTATGTACGACTTAGTAG
CGTGGCGTGCTACGCTCTCACCCTGCACACGGGGGGCCACCTGGTGCTGA
GCCGCTACAGCAGCGGCCGGCACAAGCTGAGCCACCACGCGCTCGAGTTC
CTCCTGGATCTCATCACGGACGTCGTGGGCTTCGCCTGGATCAATTTTGC
CGAGGAAATGCTGGCACAGGCATGTATCTACTTGCGCTTCAGAGCGAGCC
ACGCATCAACATACGATTTGAAACACGCATCAGCTGCTGCCGCTGCTGCT
GTCATAGGTGCTGCGCCGATGGTTCTGGCTGTCCTTCTTCTCTGTTTCAC
AGACATAATTTCCCCCGTGCTTTCGCCCCCCCCCCCTCCTGCGCAGGTGT
TCGAGGTGAGGGCGAAAACTACGCTCATGTACGCAGTGCTGGCGTTCGCC
GCAAGCCTGGGAGCTATGGAGGCCGGCTCTGTCGCCCGAGGCCTGCTGGA
CTGGCCGGTGGACTTCGAAGAAACGGCGAACCAGTTCGATGCGGGCTCGT
TCGCTCTGCCTACCAGGCGTTTTGGCTTTTCCTCGAAGCAACGGCCGGGA
ACGCGGACAGCCGAGGGTATGTACGACTTAGTAGCGTGGCGTGCTACGCT
CTCACCCTGCACACGGGGGGCCACCTGGTGCTGAGCCGCTACAGCAGCGG
CCGGCACAAGCTGAGCCACCACGCGCTCGAGTTCCTCCTGGATCTCATCA
CGGACGTCGTGGGCTTCGCCTGGATCAATTTTGCCGAGGAAATGCTGGCA
CAGGCATGTATCTACTTGCGCTTCAGAGCGAGCCACGCATCAACATACGA
TTTGAAACACGCATCAGCTGCTGCCGCTGCTGCTGTCATAGGTGCTGCGC
CGATGGTTCTGGCTGTCCTTCTTCTCTGTTTCACAGACATAATTTCCCCC
GTGCTTTCGCCCCCCCCCCCTCCTGCGCAGGTGTTCGAGGTGAGGGCGAA
AACTACGCTCATGTACGCAGTGCTGGCGTTCGCCGCAAGCCTGGGAGCTA
TGGAGGCCGGCTCTGTCGCCCGAGGCCTGCTGGACTGGCCGGTGGACTTC
GAAGAAACGGCGAACCAGTTCGATGCGGGCTCGTTCGCTCTGCCTACCAG
TTGGTTGATCACGCAGGCCGTGCATATCGGGCTCTACGGATTTTTCTATC
GTACGGCCGGAGGGCAAGGCGGTCGGGATGGCGGCAGCAGGGGCGATGGA
GATGACGTCGTCGACATCCGCCCGGCGGCTTCGTTGTTCCTCCTCGCGTA
TGCCCTCCTTTGCTCCGTGGTCGCCACTCGCGTGGTTGGTGGAACGGTGG
CTGCTTCCGCCATTGCCGTGGACGGCTCCGCCACCATCGACGGCGGTGGC
GGCGGCGGCGGCGGCGACAGCAGCAGCCGAAACGACCTCGTGATCCAGGC
GATTTCGTCTTACGAAGTCACGGCAGCACAGGCAACGGATGCAGAAGTGA
CAACACCAGGAGCATCAGCAGCAGCGGCAGCAGCAGCAGCAGCAGCAGAG
AGATCCCAGGCCGCGCCGTCGGCGTTTTCTCGTGGTGCCGGGTCCAGCCA
CCCCGGGCGGGAACCTTCCCTCAAACCCGACGACGACGGTGGCGAGGGGC
ACGGGTCGGCTTCACTGGCGGCGGAGGCGTTGGTCGCGGCGGCGGCGACG
GCGGAGGCAGGCCGGGTCCGGCGGCAGTCCCTCCGTCGGGGGCTCAAGGC
CTACATGAGGCTCACCGTGGGGATGATGTTGGTTGATCACGCAGGCCGTG
CATATCGGGCTCTACGGATTTTTCTATCGTACGGCCGGAGGGCAAGGCGG
TCGGGATGGCGGCAGCAGGGGCGATGGAGATGACGTCGTCGACATCCGCC
CGGCGGCTTCGTTGTTCCTCCTCGCGTATGCCCTCCTTTGCTCCGTGGTC
GCCACTCGCGTGGTTGGTGGAACGGTGGCTGCTTCCGCCATTGCCGTGGA
CGGCTCCGCCACCATCGACGGCGGTGGCGGCGGCGGCGGCGGCGACAGCA
GCAGCCGAAACGACCTCGTGATCCAGGCGATTTCGTCTTACGAAGTCACG
GCAGCACAGGCAACGGATGCAGAAGTGACAACACCAGGAGCATCAGCAGC
AGCGGCAGCAGCAGCAGCAGCAGCAGAGAGATCCCAGGCCGCGCCGTCGG
CGTTTTCTCGTGGTGCCGGGTCCAGCCACCCCGGGCGGGAACCTTCCCTC
AAACCCGACGACGACGGTGGCGAGGGGCACGGGTCGGCTTCACTGGCGGC
GGAGGCGTTGGTCGCGGCGGCGGCGACGGCGGAGGCAGGCCGGGTCCGGC
GGCAGTCCCTCCGTCGGGGGCTCAAGGCCTACATGAGGCTCACCGTGGGG
ATGATGGTGGGCTGGGCCTACAACCTGTGGGGCCAGGTCGAGTTCCGCCA
GGAGGAGCTAGAGTTTCGCTTCGGCCCGGCCTTGGGGGCCATCGCTTACG
CGTCTCTCAGCACCGCTTTGGGCGTGTGCATCATGGTGCGAGGCGCCGAC
AAGCTAGACGCCAGAATCCGCGGCGACCGGGCGGCGGCGGCGGCGGCGGC
TCCCGGTGCGGTGAACGGCGACGGCGGTGGCGGTGGCGGATTCGGGTCCG
GGCTCGGGGGCGCTGGCCGCGGCCATCGGACGGCGGGGGAGGAGGAGGAG
GCCGCGGCGGCGGCGGCCGCCGCCGAGATGTACAGGGACGCGCTGCGGTC
GTTCCACGCGAGGCGCCTGCTCGTGGTGGTCGGCGGGGTATCCCTGGTCG
TGGGGTGGGCGTGGGAGGAAGCCTTCGACCTGGTGCTCGAGGGGTTGGTC
GGCGAGAAGGCCGACGCCGGTACCGTGTTGGCGAAGCTGGCGCTCGCGTT
TGTCTCCACCGCGGTTGTCCTCGGGCGAGAGGTGAGGGCCGCCGCGGGAC
ACGGCCGTCACGGCGGCACCTCCGGGGGGCGCGCTGCTGGAGAGACCGGC
GTCGGCGACGAGCTGCGGGAGCCATTAGTGGCCACGGACGGCCGGGGCGC
GGCAGTTCTATAAGTGGGCTGGGCCTACAACCTGTGGGGCCAGGTCGAGT
TCCGCCAGGAGGAGCTAGAGTTTCGCTTCGGCCCGGCCTTGGGGGCCATC
GCTTACGCGTCTCTCAGCACCGCTTTGGGCGTGTGCATCATGGTGCGAGG
CGCCGACAAGCTAGACGCCAGAATCCGCGGCGACCGGGCGGCGGCGGCGG
CGGCGGCTCCCGGTGCGGTGAACGGCGACGGCGGTGGCGGTGGCGGATTC
GGGTCCGGGCTCGGGGGCGCTGGCCGCGGCCATCGGACGGCGGGGGAGGA
GGAGGAGGCCGCGGCGGCGGCGGCCGCCGCCGAGATGTACAGGGACGCGC
TGCGGTCGTTCCACGCGAGGCGCCTGCTCGTGGTGGTCGGCGGGGTATCC
CTGGTCGTGGGGTGGGCGTGGGAGGAAGCCTTCGACCTGGTGCTCGAGGG
GTTGGTCGGCGAGAAGGCCGACGCCGGTACCGTGTTGGCGAAGCTGGCGC
TCGCGTTTGTCTCCACCGCGGTTGTCCTCGGGCGAGAGGTGAGGGCCGCC
GCGGGACACGGCCGTCACGGCGGCACCTCCGGGGGGCGCGCTGCTGGAGA
GACCGGCGTCGGCGACGAGCTGCGGGAGCCATTAGTGGCCACGGACGGCC
GGGGCGCGGCAGTTCTATAA
back to top