prot_L-elsbetiae_contig7226.16082.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7226.16082.1
Unique Nameprot_L-elsbetiae_contig7226.16082.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length371
Homology
BLAST of mRNA_L-elsbetiae_contig7226.16082.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 5.350e-9
Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MVDVRTKRCGHPTCTELPSYGLADTRKAEFCAQHALEGMV 40
            MVDV +KRCGHP CT+ PSYG   ++KAE CAQHAL+GMV
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40          
BLAST of mRNA_L-elsbetiae_contig7226.16082.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 1.710e-6
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    1 MVDVRT-KRCGHPTCTELPSYGLADTRKAEFCAQHALEGMVAKS 43
            MVD+   +RC H  C + P+YG+  TRKAEFCA HAL+GMV+ S
Sbjct:    8 MVDIHNIRRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMVSGS 51          
BLAST of mRNA_L-elsbetiae_contig7226.16082.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.190e-5
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0
Query:    1 MVDVRTKRCGHPTCTELPSYGLADTRKAEFCAQHALEGM 39
            MVDV  +RC HP CT+ PS+G   ++K EFCAQHA +GM
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39          
BLAST of mRNA_L-elsbetiae_contig7226.16082.1 vs. uniprot
Match: D7FUJ4_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ4_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 3.020e-5
Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 MVDVRTKRCGHPTCTELPSYGLADTRKAEFCAQHALEGMV 40
            MV V+ KRC HP CT+ PSYG   ++K EFC QHA + MV
Sbjct:    1 MVSVQQKRCSHPECTKNPSYGKDGSKKVEFCVQHAHQDMV 40          
BLAST of mRNA_L-elsbetiae_contig7226.16082.1 vs. uniprot
Match: D7FTH3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH3_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 3.780e-5
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 MVDVRTKRCGHPTCTELPSYGLADTRKAEFCAQHALEGMV 40
            M+D+ +KRCGHP C + PS+G   +++ E CAQH+ EGMV
Sbjct:    1 MIDLVSKRCGHPGCMKHPSHGKDGSKRPEICAQHSQEGMV 40          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7226.16082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI5.350e-970.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5LBM3_9PHAE1.710e-656.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMB1_ECTSI1.190e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FUJ4_ECTSI3.020e-557.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FTH3_ECTSI3.780e-552.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7226contigL-elsbetiae_contig7226:1864..2976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7226.16082.1mRNA_L-elsbetiae_contig7226.16082.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7226 1830..4014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7226.16082.1 ID=prot_L-elsbetiae_contig7226.16082.1|Name=mRNA_L-elsbetiae_contig7226.16082.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp
MVDVRTKRCGHPTCTELPSYGLADTRKAEFCAQHALEGMVAKSAAWCIHR
GCSKRPSYGVEGTDIAEFCSPHAKQGMVDVRTKRCKHPSCKTRPSYGVEG
TRQTLFCAKHAQDGMVDTCSTRCRHPRCTTRPHYGIGGSKKPEFCGRHAR
DGMIDIVNKKCGHPACTITPSYGVDGTHKSEFCVQHAQHGMVDVISKRCA
HQGCRKSPSFGFEEGRIKEFCATHAKNGMTGYWIWSRPGSTSALATDDNA
GAGGGGKRRRRHSQEVRDTARRDGDLSRRLRSRATAFGEEETAVLAAGKS
TSASSKRARVYVNDDAARAACPDPVKEEVVDQTVMDDTEGPSSEPEERGS
GQQAHQESESAPEVVVEGSS*
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