mRNA_L-elsbetiae_contig7224.16078.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7224.16078.1
Unique NamemRNA_L-elsbetiae_contig7224.16078.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 1.630e-146
Identity = 219/277 (79.06%), Postives = 248/277 (89.53%), Query Frame = 1
Query:  169 CCAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLG-ESGEELARQAGLIIATALGEE-GVPVLLYGDLKNGRRLAEVRRSTPYFASGDIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAISRLMLE 993
            CCAVVYVSEGRN+ LLDALA+AA    PG+AGLIRQFRD QYHRTGFTIGG CP AVARASVEVSR+A+R+IDL  HEA HPRIGVVDHVSVHPLG E  +E+A++AGL IATALG++ G+PVLLYGDL NGRRLAEVRRSTPYF  G++PATIDADLGPNEVDASRG+ TVGCTPLVTNYNILLSTDDKR+ASKVT+S+RE+DGGLPWVE+LTL+R+DG +EAACNLLRP++TT A VLA AEEQAA +GIRVV+HYETGLT+E A AAISRL  E
Sbjct:   35 CCAVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGEGSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNEVDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSE 311          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA)

HSP 1 Score: 218 bits (554), Expect = 6.690e-63
Identity = 127/277 (45.85%), Postives = 163/277 (58.84%), Query Frame = 1
Query:  172 CAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLH-EANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGEEG-VPVLLYGDLKNGRRLAEVRRSTPYFASGDIPATID-ADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAISRLMLE 993
            C  VYVSEGRN  LLD L   A  + PG   L+++F D  YHR+ FT+GG  P  V   ++ V  +A   +D+  H +A HPR+GVVDHVS HPLG +  E+AR+A   +   +G +  VPVLLYG   N + LA+VRRST YF      A +  AD GP +VD   GL+  G  P V N+NI L T +K++A+ VTK+VR RDGG   VEALTLR E G  E ACNLL    T  A VL  A + A   G+ V E Y  G+T +   A    ++LE
Sbjct:   16 CCKVYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGA-PEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNTPLEVARKAACALGQRVGGKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPVDVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILAETKHVLLE 290          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK)

HSP 1 Score: 205 bits (522), Expect = 1.200e-57
Identity = 124/279 (44.44%), Postives = 163/279 (58.42%), Query Frame = 1
Query:  181 VYVSEGRNTHLLDALADAA--TAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGES---GEELARQAGLIIATALGEEGVPVLLYGDLKNGRRLAEVRRSTPYFASGDIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLG-IRVVEHYETGLTEEGASAAISRLMLEGR 999
            +YVSEGR+   ++ L + A     +     L+ +F D  Y+RT F   G    +V+R   EV+  A+ S++L  HEA+HPRIGVVDH+SVHPLGE+    EE AR+ G    T   E+G+P+L YG L NG+RL+ VRRST YF  G     + ADLGP  VD  RG + VG  P V NYN+     D++    + +++RE+DGGLP VEA+ LR   G YEAACNLL   +  P  VLAAA   AA  G I V   Y  GLT    +  ++R  L GR
Sbjct:   57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHYS-SVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGETMVFAEEAAREIGAYFGT---EKGIPILFYGSL-NGKRLSAVRRSTSYFRGGQ-DREVAADLGPRAVDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARA-LAGR 328          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO)

HSP 1 Score: 203 bits (517), Expect = 2.240e-57
Identity = 128/290 (44.14%), Postives = 170/290 (58.62%), Query Frame = 1
Query:  181 VYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEEL--ARQAGLIIATALGEE--GVPVLLYGDL-KNGRRLAEVRRSTPYF----------ASGDI-PATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAISRLMLEGRK 1002
            VY+SEG    LL+ L   A+  D G+A L+  F D+ Y+RTGFT+    P  +AR +V ++R AL +IDLRLH A+HPR+GVVDH+S HPLG +G  L  A +A  +I   LGE    VPV LYG   KN + LA++RR+  YF          ASG I P  +  D GP  +D SRGL TVG  P V NYN+LL TDD +++ ++ ++V  R GGLP VEA+ L  E G  E ACNLL    ++P  V AA ++ A   GI V + Y TG T E       +++    K
Sbjct:   15 VYISEGSKLALLEQLKGVAST-DTGTA-LVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLG-TGATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEHLDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHE-GGVEIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEELCTLAEQILAAQTK 300          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC)

HSP 1 Score: 186 bits (473), Expect = 5.650e-51
Identity = 120/284 (42.25%), Postives = 161/284 (56.69%), Query Frame = 1
Query:  160 STGCCAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLG-ESGEELARQAGLIIATALGEE--GVPVLLYGDLKNGRR-LAEVRRSTPYFASG-----------DIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDG---AYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEE 957
            ++GC   VY+SEG  + L+  L   A     GSA L+  F D+ Y+RTGFT+    P  +A + V ++R AL +IDLR H A+HPR+GVVDH+S HPLG ++    A +    I T LGE    VPV LYG   + +R LA++RR+  YF               +PA +  D GP+E+D  RGL TVG  P V N+NILL TDD ++A ++ ++V  R GGLP VEA+ L  E+G     E ACNLL    +    V A+ +E A   GI V   Y TG T E
Sbjct:    5 ASGCN--VYISEGLRSTLVQQLKVCADKCISGSA-LVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGEGELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSELDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPE 285          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE)

HSP 1 Score: 176 bits (445), Expect = 2.550e-47
Identity = 113/269 (42.01%), Postives = 146/269 (54.28%), Query Frame = 1
Query:  181 VYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALG--EEGVPVL---LYGDLKNGRR-LAEVRRSTPYFASG------------DIPATIDA-----DLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGI 918
            VY+SEGR+  L+  L +AA  A PG A L+  F+DE YHRTGFT+    P  +  A V +SR AL+ +DLR H+A+HPR+GVVDH+++HPLG      A  +  +  T  G  EE VP L    YG     RR LA++RR   YF                +PA  D      DLGP    A  G+VT+G TP V NYN+ LS  D   A K+ K++ ER GGLP V+A+ L+  DG  E ACNLL      P  + A  E  A   G+
Sbjct:    3 VYISEGRDKALIGKL-EAAAQATPGVA-LVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEVPALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATASARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLLDAAAAPPGTLQARLEGIAGAWGL 269          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO)

HSP 1 Score: 169 bits (428), Expect = 5.390e-45
Identity = 108/261 (41.38%), Postives = 137/261 (52.49%), Query Frame = 1
Query:  181 VYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLG-----ESGEELARQAGLIIATALGEEGVPVLLYGDLK-NGRRLAEVRRSTPYF---ASGDIPATID------ADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGI 918
            VY SEG N  LL  L    +  +     L+ +F D  Y+R+ FT+        A A+ E+++ A+ ++DLR HEA+HPR+GVVDH+S HPL      E    LAR  G I+         PV LYG     GRRLA++RRS  YF   A       ID       DLGP  V    G+V VG +  +TNYNILL+T D     K+ + V ER GGLP V+A+ LR  +GA E ACNLL    T P  VL      AA  GI
Sbjct:    2 VYXSEGXNVKLLKTLEQLVSGRN--GVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTAAAAMEDAAALARSIGSIVXAE--PTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVXVSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVLERVRSLAAAHGI 258          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A804P0U8_MAIZE (Uncharacterized protein n=14 Tax=Zea mays TaxID=4577 RepID=A0A804P0U8_MAIZE)

HSP 1 Score: 166 bits (419), Expect = 3.240e-43
Identity = 108/281 (38.43%), Postives = 144/281 (51.25%), Query Frame = 1
Query:  172 CAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTI------GGVCPLAVARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGEE-GVPVLLYGDL-KNGRRLAEVRRSTPYFA-----------SGDIPATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEE 957
            C  +Y+SE RN+  L A+  AA A  P  A L+  F D+ Y+R G+T+      GG  P  +  AS  V   A+ ++DL  H   HPR+GVVDHV+ HPL  +  E        +A  +G+   VP  LYG   ++GR LA +RR   YF            + D    +  D GP    AS G+V VG TP V NYN+ L+T D  VA ++ ++V ER GGL  V+A+ L   DGA E ACNLL P       V       AA LG+ V + Y T L+ E
Sbjct:    9 CCKLYISEARNSGALRAIEHAAAALRP-LAVLVNTFADDAYNRVGYTLVSPLAGGGASP-PLRCASFRVVAAAIEAVDLDAHAGAHPRLGVVDHVAFHPLASAHLEDVTALARAVAADIGDRLQVPTYLYGAAHRDGRTLASIRRQLGYFTPTSPGGEQWHGAPDSLLPVAPDAGPRTSSASNGVVVVGATPWVDNYNVPLTTADVSVARRIARAVSERGGGLACVQAMGLAHGDGATEVACNLLHPDAVGADQVQERVSRLAAGLGVGVGQGYFTDLSRE 287          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A7S1SLQ1_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLQ1_9CHLO)

HSP 1 Score: 162 bits (410), Expect = 2.180e-42
Identity = 98/243 (40.33%), Postives = 135/243 (55.56%), Query Frame = 1
Query:  265 LIRQFRDEQYHRTGFTIGGVCPLAVARASV---EVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGES---GEELARQAGLIIATALGEEGVPVLLYGDLKNG-RRLAEVRRSTPYFA-------SGDIPAT--IDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETG 945
            L+  F  E YHRT FT+   C  ++   SV    +++ A+  +DL +H+A HPR+GVVDH+S HPLG S   GE  +    +      G    P  LYG    G RRLA++RR+  YF        SG I  +  + AD GP +VD   G+V VG TP V N+N+LL++ D  +   ++K+V +R GGLP VE++ LR   G  E ACNLL  + + P  VL    E AAT G+ V + YE G
Sbjct:    6 LLNNFGGEPYHRTSFTL---CSPSIHELSVVASSIAKAAIARLDLTVHQATHPRLGVVDHISCHPLGVSASLGEAASLAHAIGSCVGGGPHPAPTFLYGAADGGGRRLADLRRAFGYFDGAAGGQWSGAIRGSEALRADFGPTDVDERVGIVAVGATPWVVNFNVLLNSTDMTLGRSISKAVSQRGGGLPAVESMALRHTGGLIEVACNLLDYKISGPDAVLKRVTELAATEGVEVKQWYEIG 245          
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Match: A0A811SGE6_9POAL (Hypothetical protein n=3 Tax=Andropogoneae TaxID=147429 RepID=A0A811SGE6_9POAL)

HSP 1 Score: 157 bits (397), Expect = 5.810e-40
Identity = 104/289 (35.99%), Postives = 142/289 (49.13%), Query Frame = 1
Query:  172 CAVVYVSEGRNTHLLDALADAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLA---------VARASVEVSRQALRSIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGE--EGVPVLLYGDL-KNGRRLAEVRRSTPYFASGDI---------------PATIDADLGPNEVDASRGLVTVGCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAYEAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEE 957
            C  +Y+SE RN   L A+  AA    P +A L+  F D+ Y+R G+T+  V PLA         + RA+  V   AL ++D   H   HPR+GVVDHV+ HPL  +  E        +A  +G+  + VP  LYG   K+GR LA +RR   YF    +               P  +  D GP     S+G+V VG T  V NYN+ + T D   A ++ ++V ER GGL  V+A+ L   DGA E ACNLL P       V       AA +G+ V E Y T  ++E
Sbjct:    8 CCKLYISEARNAGALRAIERAAAGLRP-AAVLVNAFADDDYNRVGYTL--VSPLAGDVAASPPPLHRAAFRVVAAALEAVDFGAHAGAHPRLGVVDHVAFHPLAGARLEDVAALTRAVAADIGDKLQAVPTYLYGAAHKDGRTLASIRRQLGYFTPTSLGGEQWRGAPDSWPSSPLPVAHDAGPGTPSRSKGVVVVGATAWVDNYNVPVRTADVGAARRIARAVSERGGGLASVQAMGLAHGDGAAEVACNLLDPAAVGAEQVQERVRRLAAEMGVGVGEGYFTDFSQE 293          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7224.16078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBA3_ECTSI1.630e-14679.06FTCD_N domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A4D9D4Y2_9STRA6.690e-6345.85FTCD_N domain-containing protein n=1 Tax=Nannochlo... [more]
A0A7S3XW83_HETAK1.200e-5744.44Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J9WP56_9CHLO2.240e-5744.14Probable formimidoyltransferase-cyclodeaminase n=1... [more]
I0YZZ2_COCSC5.650e-5142.25Formiminotransferase n=1 Tax=Coccomyxa subellipsoi... [more]
A8HWL3_CHLRE2.550e-4742.01Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
A0A061R7T0_9CHLO5.390e-4541.38Formimidoyltransferase-cyclodeaminase-like isoform... [more]
A0A804P0U8_MAIZE3.240e-4338.43Uncharacterized protein n=14 Tax=Zea mays TaxID=45... [more]
A0A7S1SLQ1_9CHLO2.180e-4240.33Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A811SGE6_9POAL5.810e-4035.99Hypothetical protein n=3 Tax=Andropogoneae TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7224contigL-elsbetiae_contig7224:2925..6437 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score435.3
Seed ortholog evalue2.5e-119
Seed eggNOG ortholog2880.D8LBA3
Preferred nameFTCDNL1
Hectar predicted targeting categorymitochondrion
GOsGO:0000139,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005790,GO:0005793,GO:0005794,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0006996,GO:0007010,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0012505,GO:0015631,GO:0016020,GO:0016043,GO:0016054,GO:0016740,GO:0016741,GO:0016742,GO:0016829,GO:0016840,GO:0016841,GO:0019439,GO:0019752,GO:0030407,GO:0030409,GO:0030412,GO:0030868,GO:0031090,GO:0031984,GO:0034641,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:0071840,GO:0071944,GO:0097425,GO:0098588,GO:0098791,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606
EggNOG free text desc.formimidoyltetrahydrofolate cyclodeaminase activity
EggNOG OGs2QS19@2759,COG3404@1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionFormiminotransferase, N-terminal subdomain
Ec32 orthologEc-27_004640.1
Exons5
Model size1702
Cds size933
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.5807085-UTR-L-elsbetiae_contig7224:2924..36151622816804.5807085-UTR-L-elsbetiae_contig7224:2924..3615Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7224 2925..3615 -
1691683826.269624-UTR-L-elsbetiae_contig7224:2924..36151691683826.269624-UTR-L-elsbetiae_contig7224:2924..3615Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7224 2925..3615 -
1622816804.6540034-UTR-L-elsbetiae_contig7224:6359..64371622816804.6540034-UTR-L-elsbetiae_contig7224:6359..6437Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7224 6360..6437 -
1691683826.333859-UTR-L-elsbetiae_contig7224:6359..64371691683826.333859-UTR-L-elsbetiae_contig7224:6359..6437Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7224 6360..6437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816804.592-CDS-L-elsbetiae_contig7224:3615..38371622816804.592-CDS-L-elsbetiae_contig7224:3615..3837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 3616..3837 -
1691683826.2800953-CDS-L-elsbetiae_contig7224:3615..38371691683826.2800953-CDS-L-elsbetiae_contig7224:3615..3837Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 3616..3837 -
1622816804.6026185-CDS-L-elsbetiae_contig7224:4616..47571622816804.6026185-CDS-L-elsbetiae_contig7224:4616..4757Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 4617..4757 -
1691683826.2877097-CDS-L-elsbetiae_contig7224:4616..47571691683826.2877097-CDS-L-elsbetiae_contig7224:4616..4757Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 4617..4757 -
1622816804.6139798-CDS-L-elsbetiae_contig7224:5245..53201622816804.6139798-CDS-L-elsbetiae_contig7224:5245..5320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 5246..5320 -
1691683826.2959313-CDS-L-elsbetiae_contig7224:5245..53201691683826.2959313-CDS-L-elsbetiae_contig7224:5245..5320Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 5246..5320 -
1622816804.6250753-CDS-L-elsbetiae_contig7224:5659..60231622816804.6250753-CDS-L-elsbetiae_contig7224:5659..6023Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 5660..6023 -
1691683826.3118246-CDS-L-elsbetiae_contig7224:5659..60231691683826.3118246-CDS-L-elsbetiae_contig7224:5659..6023Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 5660..6023 -
1622816804.6410608-CDS-L-elsbetiae_contig7224:6228..63591622816804.6410608-CDS-L-elsbetiae_contig7224:6228..6359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 6229..6359 -
1691683826.3243768-CDS-L-elsbetiae_contig7224:6228..63591691683826.3243768-CDS-L-elsbetiae_contig7224:6228..6359Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7224 6229..6359 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7224.16078.1prot_L-elsbetiae_contig7224.16078.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7224 3616..6359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7224.16078.1

>prot_L-elsbetiae_contig7224.16078.1 ID=prot_L-elsbetiae_contig7224.16078.1|Name=mRNA_L-elsbetiae_contig7224.16078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp
MLSLHRGSFLATKSADRVRFTITRHALSTGCCAVVYVSEGRNTHLLDALA
DAATAADPGSAGLIRQFRDEQYHRTGFTIGGVCPLAVARASVEVSRQALR
SIDLRLHEANHPRIGVVDHVSVHPLGESGEELARQAGLIIATALGEEGVP
VLLYGDLKNGRRLAEVRRSTPYFASGDIPATIDADLGPNEVDASRGLVTV
GCTPLVTNYNILLSTDDKRVASKVTKSVRERDGGLPWVEALTLRREDGAY
EAACNLLRPRQTTPAMVLAAAEEQAATLGIRVVEHYETGLTEEGASAAIS
RLMLEGRKAL*
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mRNA from alignment at L-elsbetiae_contig7224:2925..6437-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7224.16078.1 ID=mRNA_L-elsbetiae_contig7224.16078.1|Name=mRNA_L-elsbetiae_contig7224.16078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3513bp|location=Sequence derived from alignment at L-elsbetiae_contig7224:2925..6437- (Laminarionema elsbetiae ELsaHSoW15)
CAGCCAATCGAGCGAGAGTAGGGTGTCTTGAAATGTTCCAAGCGAAGCGG CAGCACACACAGAGCTCGCTTGCCGTTCATGTTATCACTGCATCGAGGTT CTTTTCTGGCCACCAAGTCTGCCGACCGCGTAAGATTCACCATCACCCGC CACGCTCTCAGTACAGGCTGCTGCGCGGTGGTCTATGTATCCGAGGGAAG AAACACGCAGTGAGTGAAGCAAGTACAAAAACGTGGGTCCACATGCTCGG TATGTTTTTCGTCCACTCTGTCTATGCGCAGCAACTATGGTACGCCTACG ACATGCAAGGTTTACTTTTGTATGGGGGGGGAAATCAGATGCGATCTCAG TGCAAGTTCTCGCCGCCCGCCTGCTCGGTTGCGTCGATCTCTCTCGGGCC TCCCCGTACAAAAGCTTGCTGGATGCTCTCGCCGACGCTGCAACGGCGGC CGACCCCGGTTCCGCTGGCCTGATCAGGCAGTTCAGAGATGAGCAGTACC ATAGAACGGGCTTCACGATCGGCGGGGTGTGCCCCCTTGCCGTCGCGAGA GCTTCGGTCGAGGTCAGCCGCCAGGCCCTGCGGAGTATCGACCTCCGCTT GCACGAAGCTAACCACCCTAGAATAGGAGTGGTTGATCACGTTTCGGTTC ACCCGCTGGGAGAGAGCGGCGAGGAGTTAGCCCGGCAGGCAGGGCTAATC ATCGCGACAGCGTTGGGCGAGGAAGGTGTGCCGGTCTTGTTGTACGGCGA TCTGAAGAACGGGAGGCGGCTAGCGGAGGTGAGGGTGGAGGAGGGAACCC CGTCGTGTCAAATGGAGAGACAGACGTAAGCGGTCGAAATCGGCAAGTTT TGAGTTTGAATCGATTGCTCAACATGAAGCGCCTATTCTACTACTGTACC CTCGAAAATCTTCATCCTGGGTGTGCTCCAGTACTCACTGCGCTGTGACG TTTCCATTGGAGGTGTAGATATCTATTTATGTAGGTGGATGTAGTAGATG GTGTTCGCGATCAGTTACATACACCGTCGTGGAACGCCTCTCTGTACGTT GGTTTGGTCATGATTCAATACGGTGCTGAGCAGCAGTGCTGCTCCACCTC TCTGTTCCCCTTGGCAGGTGCGCAGATCAACGCCCTACTTCGCCAGCGGA GATATCCCCGCGACGATCGACGCAGACCTTGGACCTAACGAGGTTTGTGC ATGAAAACATGTTTTGAGATGTGAGTGTTTGCGATACTACTACTATAGCA CCCCTTATCTCTGTCACGCACAGCGCGTATACCATAAGAAAGGCTGTGTG TTGTTTGCTGGCAATCGGAACAGAAAAGGGAAAGAGGAAGACTCGTAAAA AGGACCAAACGCAGCGCCTTTACAGGCCTACGGTCTCGGGGACTTTTTAC TGGTAGCAATCGCGCCGTCGAATCCTGCGCTCGCAGCTCACGTGCCCGCG CCGGTGCGCCTTTCAGGCTACCGCATACACCCGCATCGAGCCATTTGCAC ACCAGGTAGACGCACCTCAAGATTCGAATTTCAGTCCCATCACCCCCACC ACTTCTTCAAGTTCCATTCCAACGAATTGCCTACCCCACGCGAAATACGA ACACGTATTGTAGATATACTAAATACCACGAAAACAAAACACCGCTACAT ATTCGATCATCGTGCATCGTGCGGCGGCAGGTGGATGCCTCTCGCGGGCT CGTGACCGTCGGCTGCACCCCGCTGGTGACGAATTACAACATCCTTCTCA GCACCGATGACAAGCGCGTCGCCTCGAAAGTGACCAAGAGCGTGAGAGAG AGAGACGGCGGGTTGCCATGGGTGAGACGAGACGGCTCTCGCTCTGGGCG TCGGGCTCGCCACGTGTTTTCTGCGCTTAAAATGTCCTCGCACGAAAGGC GGCCAGTGCTGAGACGTGTACCGTAAGCGATAGGCGGGTACGTACTTCTA TGCGCCTGTTGCGCCCCCGGGACCAGCCGACGCTTTCGGCGTTCCCATCC TTGGTGTTACGATGTTGTGTTGAAAGGCGCGAAGGCAGCCGCGAGCCTCA AAGTTTATAATGCTCGATCCCGGGGCGAAGAATGGCACCGTGTGTTTGTG CATCGACTGGGAATCAATTTTGACGAACCAGTACATAAATACATACATAC ACACACAGACGACGCTAACGTTGTACGTGTCGTTTTTCAACAGCCAAAAG CAGTTTGGGGGCTCCTTTATTTGGGCTGACGTGCAGAGAAACGCTGTTGG GTGCGGTAGCCCACGCGGCCCCCAGAAGTTGCCCAAGACGTTCCGTGTCG CCTGCGATTTGCCGGAGGTTTTTTGAGTTGCATGTTCGCGCGAGTGAGTC CTTGTAATTACTTCCAAACCCCTTTTGCGTATTGTAGGGTGGGCGGGTGG GTACTTGGAGTACCGACCGTGCACAGAAAAGGAGGCTGCTCGCTGTACGC CAGATTTAGAAATATCTCTCCCCAAAGCAGCACTCAAGTAAAGGAGCCCC CAATCTGGCACTTGAGCTGATGCAACCTGGCACGACTGTTTCGGGAGCCT TTCTTCACCGGAGCCGACTGACGAACTGATCATCCGCCGCAAATCGGCAG GTGGAAGCGCTGACCCTTAGAAGAGAAGACGGCGCCTATGAGGCCGCGTG TAACTTGCTTCGGCCGAGGCAGACGACGCCCGCGATGGTGTTGGCCGCTG CCGAGGAGCAGGCGGCCACTCTGGGCATCCGAGTGGTGGAGCACTACGAG ACCGGACTCACGGAAGAGGGGGCGTCGGCTGCCATATCTCGGTTGATGTT GGAGGGAAGAAAAGCCTTGTGAGGCGGTTCCACCAACTGGGAGAGATACT TTGTACCATGCATTTACAACAGTAGTAGTAGCAGTAGCGTCGATTTGTTG TTAAAGCCGGACAACAAAATGGCGCCTGCTGATGTAATGTGCTTGATTGA ACCCTGCATAGATTTGGGGGGGGGGCGCGTGTGTGTGCTTGGGTGGCTGG CGGACTGTGATTTTCCCTGGCTTCATCGCGAGAGGCTGTCATGTTGGAAC GGCAGGCTTCGGATGGGTGACCTTCCTCCGAATGGGTGGCAAGGTACCGT ATGCTGGTAGACATATTTATTTCTTGGCCCCCGGCCCGTGATCTAATCAG TTGCGTCATTCAGTTGACTATATCTTATTTCAGGGGTTCTAATTTTGAAG AAGTCTCGCCTACATCCTGTGTGTGTAAATGCTTCGTGGAAAATGGATAA AAGTGGGTGTGTCTTCTTCCTTTTGGGACAAAAATGGTTATATTTTATTC GTTTGTTATTTTGTGCTTAGCGGACCCTTCAGGTTCATTTTTTATTTCAT TTTTCGTTTTTCAGTACAAACACCCTTTTTAGAGTAAGTTATCCTATCCT GTGATCACGGGGATCAGTCGCGTCAGTGTTGGGTTAGCACGGACATATGG AGGTACTGGAGAGACTGTTTTTCATGTGAAGACAACAACATCAACACCAC AGAGTCCATGCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7224:2925..6437-

>mRNA_L-elsbetiae_contig7224.16078.1 ID=mRNA_L-elsbetiae_contig7224.16078.1|Name=mRNA_L-elsbetiae_contig7224.16078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig7224:2925..6437- (Laminarionema elsbetiae ELsaHSoW15)
ATGTTATCACTGCATCGAGGTTCTTTTCTGGCCACCAAGTCTGCCGACCG
CGTAAGATTCACCATCACCCGCCACGCTCTCAGTACAGGCTGCTGCGCGG
TGGTCTATGTATCCGAGGGAAGAAACACGCAATGTTATCACTGCATCGAG
GTTCTTTTCTGGCCACCAAGTCTGCCGACCGCGTAAGATTCACCATCACC
CGCCACGCTCTCAGTACAGGCTGCTGCGCGGTGGTCTATGTATCCGAGGG
AAGAAACACGCACTTGCTGGATGCTCTCGCCGACGCTGCAACGGCGGCCG
ACCCCGGTTCCGCTGGCCTGATCAGGCAGTTCAGAGATGAGCAGTACCAT
AGAACGGGCTTCACGATCGGCGGGGTGTGCCCCCTTGCCGTCGCGAGAGC
TTCGGTCGAGGTCAGCCGCCAGGCCCTGCGGAGTATCGACCTCCGCTTGC
ACGAAGCTAACCACCCTAGAATAGGAGTGGTTGATCACGTTTCGGTTCAC
CCGCTGGGAGAGAGCGGCGAGGAGTTAGCCCGGCAGGCAGGGCTAATCAT
CGCGACAGCGTTGGGCGAGGAAGGTGTGCCGGTCTTGTTGTACGGCGATC
TGAAGAACGGGAGGCGGCTAGCGGAGCTTGCTGGATGCTCTCGCCGACGC
TGCAACGGCGGCCGACCCCGGTTCCGCTGGCCTGATCAGGCAGTTCAGAG
ATGAGCAGTACCATAGAACGGGCTTCACGATCGGCGGGGTGTGCCCCCTT
GCCGTCGCGAGAGCTTCGGTCGAGGTCAGCCGCCAGGCCCTGCGGAGTAT
CGACCTCCGCTTGCACGAAGCTAACCACCCTAGAATAGGAGTGGTTGATC
ACGTTTCGGTTCACCCGCTGGGAGAGAGCGGCGAGGAGTTAGCCCGGCAG
GCAGGGCTAATCATCGCGACAGCGTTGGGCGAGGAAGGTGTGCCGGTCTT
GTTGTACGGCGATCTGAAGAACGGGAGGCGGCTAGCGGAGGTGCGCAGAT
CAACGCCCTACTTCGCCAGCGGAGATATCCCCGCGACGATCGACGCAGAC
CTTGGACCTAACGAGGTGCGCAGATCAACGCCCTACTTCGCCAGCGGAGA
TATCCCCGCGACGATCGACGCAGACCTTGGACCTAACGAGGTGGATGCCT
CTCGCGGGCTCGTGACCGTCGGCTGCACCCCGCTGGTGACGAATTACAAC
ATCCTTCTCAGCACCGATGACAAGCGCGTCGCCTCGAAAGTGACCAAGAG
CGTGAGAGAGAGAGACGGCGGGTTGCCATGGGTGGATGCCTCTCGCGGGC
TCGTGACCGTCGGCTGCACCCCGCTGGTGACGAATTACAACATCCTTCTC
AGCACCGATGACAAGCGCGTCGCCTCGAAAGTGACCAAGAGCGTGAGAGA
GAGAGACGGCGGGTTGCCATGGGTGGAAGCGCTGACCCTTAGAAGAGAAG
ACGGCGCCTATGAGGCCGCGTGTAACTTGCTTCGGCCGAGGCAGACGACG
CCCGCGATGGTGTTGGCCGCTGCCGAGGAGCAGGCGGCCACTCTGGGCAT
CCGAGTGGTGGAGCACTACGAGACCGGACTCACGGAAGAGGGGGCGTCGG
CTGCCATATCTCGGTTGATGTTGGAGGGAAGAAAAGCCTTGTGAGTGGAA
GCGCTGACCCTTAGAAGAGAAGACGGCGCCTATGAGGCCGCGTGTAACTT
GCTTCGGCCGAGGCAGACGACGCCCGCGATGGTGTTGGCCGCTGCCGAGG
AGCAGGCGGCCACTCTGGGCATCCGAGTGGTGGAGCACTACGAGACCGGA
CTCACGGAAGAGGGGGCGTCGGCTGCCATATCTCGGTTGATGTTGGAGGG
AAGAAAAGCCTTGTGA
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