prot_L-elsbetiae_contig7207.16056.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7207.16056.1
Unique Name	prot_L-elsbetiae_contig7207.16056.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	115

Homology

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BLAST of mRNA_L-elsbetiae_contig7207.16056.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 4.680e-10
Identity = 30/39 (76.92%), Postives = 31/39 (79.49%), Query Frame = 0

Query:   77 LQALVRMGLLTPNLDSPMHSCWTNTKHCNAKTARPCQVC 115
            + ALVRMGLLT NLDSPMHS WTN KH NAKT R CQ C
Sbjct:  117 ITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQAC 155

[Close]

BLAST of mRNA_L-elsbetiae_contig7207.16056.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 4.150e-9
Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 0

Query:   79 ALVRMGLLTPNLDSPMHSCWTNTKHCNAKTARPCQVC 115
            ALVR+GLLT NLDSP+HS WTN KH NAKT R CQ C
Sbjct:   25 ALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQAC 61

[Close]

BLAST of mRNA_L-elsbetiae_contig7207.16056.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.150e-7
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0

Query:   78 QALVRMGLLTPNLDSPMHSCWTNTKHCNAKTARPCQVC 115
            +ALVR+GLLT NLDSPMHS W N KH NAKT   CQ C
Sbjct:   21 EALVRLGLLTANLDSPMHSLWANQKHHNAKTT--CQAC 56

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7207.16056.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7207.16056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FZI4_ECTSI	4.680e-10	76.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FWW9_ECTSI	4.150e-9	75.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPX4_9PHAE	3.150e-7	71.05	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 86..115
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..85
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..63

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7207	contig	L-elsbetiae_contig7207:4347..4691 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7207.16056.1	mRNA_L-elsbetiae_contig7207.16056.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7207 4347..4692 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7207.16056.1 ID=prot_L-elsbetiae_contig7207.16056.1|Name=mRNA_L-elsbetiae_contig7207.16056.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp
LEPGFIVWNLLVGNSPPSSSRGGDRCVRTLELMFCPGRTCESFVQTAHRA
LFCAPANLLTLGCLYRYILVSCFCSLLQALVRMGLLTPNLDSPMHSCWTN
TKHCNAKTARPCQVC