prot_L-elsbetiae_contig720.16047.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig720.16047.1
Unique Nameprot_L-elsbetiae_contig720.16047.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length68
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig720.16047.1 vs. uniprot
Match: A0A8K0TT44_9PEZI (WSC domain-containing protein n=1 Tax=Plectosphaerella cucumerina TaxID=40658 RepID=A0A8K0TT44_9PEZI)

HSP 1 Score: 51.2 bits (121), Expect = 8.470e-6
Identity = 28/66 (42.42%), Postives = 34/66 (51.52%), Query Frame = 0 
Query:    5 LKTCIADAAFKTYYFA-LAEGSACYCGNP-----QPVDEERGICEEPCAGDVSSVCGGVNSYDLYE 64
            ++TCIA    + Y +A L     CYCGN       PV    G+CE PC GD S +CGG     LYE
Sbjct:  386 VETCIAFCNDRGYKYAGLEYQRECYCGNDVAADRAPVKGILGVCEMPCKGDNSQICGGYGGLSLYE 451
[Close]
BLAST of mRNA_L-elsbetiae_contig720.16047.1 vs. uniprot
Match: A0A086TF94_ACRC1 (Galactose oxidase-like protein n=1 Tax=Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137) TaxID=857340 RepID=A0A086TF94_ACRC1)

HSP 1 Score: 50.8 bits (120), Expect = 1.170e-5
Identity = 24/69 (34.78%), Postives = 36/69 (52.17%), Query Frame = 0 
Query:    1 PQACLKTCIADAAFKTYYFALAEGSACYCGNPQPVDE------ERGICEEPCAGDVSSVCGGVNSYDLY 63
            P  C   C   A F     A+  G+ CYCG+P  +D       + G+C+ PCAG+ +++CGG +S   Y
Sbjct:   52 PMVCTNAC---AEFGYMAAAMGHGNICYCGDPANIDTAGAKFVDEGLCDIPCAGNGTAMCGGGSSLSTY 117
[Close]
BLAST of mRNA_L-elsbetiae_contig720.16047.1 vs. uniprot
Match: W6Q5D8_PENRF (Carbohydrate-binding WSC n=2 Tax=Penicillium roqueforti TaxID=5082 RepID=W6Q5D8_PENRF)

HSP 1 Score: 50.1 bits (118), Expect = 1.400e-5
Identity = 21/52 (40.38%), Postives = 32/52 (61.54%), Query Frame = 0 
Query:   20 ALAEGSACYCGNPQPVDEER---GICEEPCAGDVSSVCGGVNSYDLYEIADN 68
            AL+ G+ CYCGN  P D  +     C+ PCAG  +  CGG ++++L + A+N
Sbjct:   61 ALSRGNMCYCGNEMPPDSAKIADSKCDVPCAGWPAGSCGGADTFNLIQAAEN 112
[Close]
BLAST of mRNA_L-elsbetiae_contig720.16047.1 vs. uniprot
Match: A0A6H5KL41_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL41_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 2.200e-5
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 0 
Query:   19 FALAEGSACYCGNPQPV----DEERGICEEPCAGDVSSVCGGVNSYDLYEIA 66
            FA+  G  C C          D + G+C+ PC GD S  CGGV+S+D+Y+++
Sbjct:  138 FAVTRGDLCTCFTEADTGIFDDRKGGVCDAPCTGDSSQPCGGVDSFDVYQLS 189
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig720.16047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A8K0TT44_9PEZI8.470e-642.42WSC domain-containing protein n=1 Tax=Plectosphaer... [more]
A0A086TF94_ACRC11.170e-534.78Galactose oxidase-like protein n=1 Tax=Acremonium ... [more]
W6Q5D8_PENRF1.400e-540.38Carbohydrate-binding WSC n=2 Tax=Penicillium roque... [more]
A0A6H5KL41_9PHAE2.200e-538.46WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 1..56
e-value: 2.3E-8
score: 34.1
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..66
score: 8.614

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig720contigL-elsbetiae_contig720:33539..33742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig720.16047.1mRNA_L-elsbetiae_contig720.16047.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig720 33539..33742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig720.16047.1 ID=prot_L-elsbetiae_contig720.16047.1|Name=mRNA_L-elsbetiae_contig720.16047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp
PQACLKTCIADAAFKTYYFALAEGSACYCGNPQPVDEERGICEEPCAGDV
SSVCGGVNSYDLYEIADN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd