prot_L-elsbetiae_contig720.16042.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig720.16042.1
Unique Nameprot_L-elsbetiae_contig720.16042.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length95
Homology
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BLAST of mRNA_L-elsbetiae_contig720.16042.1 vs. uniprot
Match: A0A6H5LAU8_9PHAE (CXXC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU8_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 4.230e-27
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 0 
Query:    1 RFESFACRNSRCIYCNPPGLPIYMAEWAMCSTRFKLKSGQPPPNVHGKVKKQAQPPRWEREAISTASAAARGG-ARYDEESV 81
            RFESFACRNS CIYC PPGLP+YMAEWA+ S RFKLK GQPPP + G+++KQA PPRWEREAI    A+A  G +  DEE++
Sbjct:  810 RFESFACRNSHCIYCKPPGLPLYMAEWAVSSARFKLKGGQPPPTL-GRIQKQAVPPRWEREAIPDGRASASSGVSSRDEEAL 890
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BLAST of mRNA_L-elsbetiae_contig720.16042.1 vs. uniprot
Match: D7G6J0_ECTSI (CXXC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J0_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 7.870e-27
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 0 
Query:    1 RFESFACRNSRCIYCNPPGLPIYMAEWAMCSTRFKLKSGQPPPNVHGKVKKQAQPPRWEREAISTASAAARGGARYDEE 79
            RFESFACRNS CIYC PPGLP+YMAEWA+ S RFKLK GQPPP + G+++KQA PPRWEREAI    A+A  G    +E
Sbjct:  448 RFESFACRNSHCIYCKPPGLPLYMAEWAVSSARFKLKGGQPPPTL-GRIQKQAVPPRWEREAIPDGRASAASGVSARDE 525
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig720.16042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAU8_9PHAE4.230e-2767.07CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G6J0_ECTSI7.870e-2767.09CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig720contigL-elsbetiae_contig720:9856..12246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig720.16042.1mRNA_L-elsbetiae_contig720.16042.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig720 9856..12248 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig720.16042.1 ID=prot_L-elsbetiae_contig720.16042.1|Name=mRNA_L-elsbetiae_contig720.16042.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=95bp
RFESFACRNSRCIYCNPPGLPIYMAEWAMCSTRFKLKSGQPPPNVHGKVK
KQAQPPRWEREAISTASAAARGGARYDEESVGGGGAGSGGRGSGV
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