mRNA_L-elsbetiae_contig72.16041.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig72.16041.1
Unique NamemRNA_L-elsbetiae_contig72.16041.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 5.790e-53
Identity = 134/272 (49.26%), Postives = 166/272 (61.03%), Query Frame = 1
Query:  637 VRELRRAKANALLASVSKWGDSR-VPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGRTPLF-CNIMLPRCSPKMVRVLVDAGADTARAFPVTQA-GRVFFNDTALTLTTFQLGKKMV-DGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTPSALTSMMPVMRTRARRRGVLLQALFRNSVK 1440
            +REL R  AN LL   S  G++  VPL +AA  GH+ V+RELI   GIEGC   S G  AL  AA   H+ I+A+L EAGVVD+G AL  AAG+G  A+VKFL + R  +      GAY+N R   G TPL  C       +P++VR+LVDAGADT     V    G V FNDT L  T  +L KK+V DGKPAT++ L RLEAI RLL+RV+AVHA SWLW SG+    RA E       P AL  M+P+++ R +RR  L+  L R SVK
Sbjct:  256 MRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLP-ALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 2.740e-52
Identity = 138/279 (49.46%), Postives = 175/279 (62.72%), Query Frame = 1
Query:  646 LRRAKANALLASVSKWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAG-VVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVN-TRHPTGRTPLFCNIMLPR---CSPKMVRVLVDAGADTARAFPVTQAGRVF--FNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTPSALTS-------MMPVMRTRARRRGVLLQALFRNSVK 1440
            L RAKAN LL S +  G S VPL +AAL G+  V RE+I   GI GCGG SGGV ALR AA+  H+  +A+L +AG VVD+G AL+ AA  G+  AVKFL ++R+     AD  AYVN TR P GRTP+ C + +     CSPK+VR+LVDAGA+T RA  VT+    +   ++T L  TT  L +  VDG+ AT++QL RL+  R LL R EAVHA SWLW SG  P  R A+AA    T +A T+       M P++R +   RGVLL+ LFR S K
Sbjct:  164 LLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ-----ADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPP--RIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 3.200e-46
Identity = 126/275 (45.82%), Postives = 160/275 (58.18%), Query Frame = 1
Query:  652 RAKANALLASVS-KWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNT-RHPTGRTPLFCNI---MLPRCSPKMVRVLVDAGADTARAFPVT-QAGRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSG----SFP--GNRAAEAADGATTPSALTSMMPVMRTRARRRGVLLQALFRNSVK 1440
            RAKAN LL  V+  W    +PL  AA  G  GV+ EL+   GI GCGG +GGV AL+ AA   H+ ++  L  AGVVD+G AL+ A   G    VKFL QQ+ G    ++  AYV+  R P GRTPL CNI   +   CSPK+VR+LVDAGADT      T Q G +    T L+L T  L  K+   K   ++ L RLE IRRLL+RVEAVHA SWLW +G      P  G  A E    +TT   L +++P++R RAR RG +  +L R +VK
Sbjct:  168 RAKANPLLTRVNLAW--QHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGT--PSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 7.010e-46
Identity = 132/276 (47.83%), Postives = 163/276 (59.06%), Query Frame = 1
Query:  634 AVRELRRAKANALLASV-SKWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGRTPLFCNIMLPRCSPKMVRVLVDAGADTARAFPV-TQAGR--VFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTP--SALTSMMPVMRTRARRRGVLLQALFRNSVKP 1443
            A R L  AKA+ LL +V    G + +PL  AA  GH  V+ ELI   GI+GCGG+SGGV AL+ AA+  ++ I+ +L  AGVVD+G AL+ AAG G    +KFL +Q R + KT D  AYVNTR   G TPL   I   R  P++VR+LV+AGADT     V  Q G   V      LT+   +   K+V   PA+ +QL +LEAIRRLL+RVEAVHA SWLW S      RAA      TT   +A+T  M V R RAR R V L AL R S KP
Sbjct:  163 AARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARAR-KTMDEAAYVNTRDRGGVTPLLWGIQHYR--PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 8.530e-44
Identity = 124/275 (45.09%), Postives = 162/275 (58.91%), Query Frame = 1
Query:  631 VAVRELRRAKANALLASVSKWGDSR-VPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGRTPLFCNIMLPRCSPKMVRVLVDAGADTARAFPV-TQAGRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTPSALTS---MMPVMRTRARRRGVLLQALFRNSVK 1440
            VAV  L  AKA+ LL   S  G  R +PL +AA  GH  V+ ELI   GI+GCGG+SGG  ALR AA    + I+A+L +AGVVD+G AL+ AAG G  A +KFL +Q RG+ K+ D  AY+NT +  G T L   I   RC P++V++LV+AGADT     +  Q G   F+ T L LT   LG +    KP T ++ ++LE IRRLL+R EAVHA SWLW S +     A     G TT ++  +   +M ++  R R R  LL AL R S K
Sbjct:  162 VAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGR-KSTDRAAYMNTLNGVGLTSLLDGIQ--RCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR--SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 8.920e-44
Identity = 126/281 (44.84%), Postives = 158/281 (56.23%), Query Frame = 1
Query:  634 AVRELRRAKANALLASVSKWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGRTPLF-----CNIMLPRCSPKMVRVLVDAGADTARAFPVTQA-GRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTPS-----ALTSMMPVMRTRARRRGVLLQALFRNSVKP 1443
            A REL RA AN L+        + +PL  AA  G+  V+RELI   GIEGCGG S G  AL  A E   V  +A+L  AGVVD+G AL  +AGLG+ A+VK+L Q      K    GAYVN R   G TPL      C +      P++ R+LV+AGADT      T + G V F+ T L LT   L  K VDG   ++ +L RLE IRRLL++VEAVHA SWLW S S  G R  + A   TT +      L  ++P++R RARR GV+  AL R+  KP
Sbjct:  149 ATRELLRANANPLITRAPL--PTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA---KHYGPGAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 1.800e-38
Identity = 120/270 (44.44%), Postives = 156/270 (57.78%), Query Frame = 1
Query:  655 AKANALLA-SVSKWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDS-GTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVN-TRHPTGRTPLFCNIMLPR---CSPKMVRVLVDAGADTARAFPV-TQAGRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGAT-TPSALTSMMPVMRTRARRRGVLLQALFRNSVK 1440
            AKAN LL  S    G S VPL +AA  G S V+ EL+   GI  CGG SGG+ ALR AA  G V I++ML +AGVVD  G ALL A G G+ AAV FL +Q+  + +T+    YVN  R   G T L  +    +   C+P++ R LVDAGADT  A  +  +  R   N T L        ++     PAT++QL RLEA RR+L+RV AVHA SW+W S +    R A +   A  +P+ LT+++PV+R RA RR +L   LFR S K
Sbjct:  140 AKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS----YVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKK 405          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 9.710e-38
Identity = 114/263 (43.35%), Postives = 144/263 (54.75%), Query Frame = 1
Query:  670 LLASVSKWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQR-RGKNKTADGGAYVNT-RHPTGRTPLFCNIMLPRCSPKMVRVLVDAGADTARAFPVTQAGRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTPSA----LTSMMPVMRTRARRRGVLLQALFRNSVK 1440
            LL +    G++ VPL  AAL GH  V REL+   GI GC GAS GV AL  AA   H+ ++A+L +AGVVD+G AL+    LG+  A+KFL +Q+  G  +T     Y +T R   G TPL   +    CSP++VR+LVDAGAD   A  V          T L   T  L +K+VD   AT  QL  L A RRLL++VE VHA SWLW  G   G  AA     A T S     L S +P+M  R+ RRG  L  +FR + K
Sbjct:  171 LLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTT----YASTPRDGRGHTPLLSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLW--GGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKK 427          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 6.000e-37
Identity = 106/220 (48.18%), Postives = 139/220 (63.18%), Query Frame = 1
Query:  838 HVGILAMLAEAGVVDS-GTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGRTPLFCNIMLPRCS---PKMVRVLVDAGADTARAFPVTQA-GRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATT---PSALTSMMPVMRTRARRRGVLLQALFRNSVKP*SGSARGTSR 1473
            H+ I+A+L  AGV D+ G  LLG AGLG+ A+V+FL +QRR K       AY N+   +G TPL C+I    CS   P++VR+LVDAGADT     VT   G V +NDT L +TT  L +K+VDGKPATE+QL RL+AIRRLL+RV+AVHA SWLW S +     A E + G      P +LT  +P+++ RA+   V +  L R+S  P S S RG+ R
Sbjct:    4 HMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRR-KESEMSVHAYANSSDGSGMTPLSCSIEW--CSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLT--LPILKRRAKTCHVFVATLLRSS--PIS-SGRGSRR 215          
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 3.210e-36
Identity = 115/263 (43.73%), Postives = 147/263 (55.89%), Query Frame = 1
Query:  661 ANALLASV--SKWGDSRVPLGIAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAEAGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGRTPLFCNIMLPRCSPKMVRVLVDAGADTARAFPVT-QAGRVFFNDTALTLTTFQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNRAAEAADGATTPSALTSMMPVMRTRARRRGVLLQALFRNSVK 1440
            A+ LL +V  S  G   +PL +A     S V+REL+   GIE CGG S GV AL  A    HVGI+AMLA AGVVD G+AL  AA  G  A+VKFL +Q  GK+ +A   AYVN  +  G TPL  NI    CS ++VR+LVDAGADT  A+ +T + G+     T LT     L +K   G   T ++   L+A  RLL++VEA HA SW+W +GS   +R       A  P  LT  +P+ R     R  LL A+ R S K
Sbjct:  172 ADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKH-SASRSAYVNKLNRFGLTPLLENITCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGD--TGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRRQRRAEAPVRLT--LPMTRRDTGTRRALLGAVSRYSEK 429          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig72.16041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT11_ECTSI5.790e-5349.26EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1H7_ECTSI2.740e-5249.46EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
D7FVK3_ECTSI3.200e-4645.82EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KJA9_9PHAE7.010e-4647.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQV0_9PHAE8.530e-4445.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI8.920e-4444.84EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU3_ECTSI1.800e-3844.44EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LL76_ECTSI9.710e-3843.35EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LSC5_ECTSI6.000e-3748.18EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI3.210e-3643.73EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig72contigL-elsbetiae_contig72:59824..63514 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue1.9e-51
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size2146
Cds size1029
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig72.16041.1prot_L-elsbetiae_contig72.16041.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig72 60524..61947 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816801.2231843-UTR-L-elsbetiae_contig72:59823..605231622816801.2231843-UTR-L-elsbetiae_contig72:59823..60523Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 59824..60523 -
1691683823.8893282-UTR-L-elsbetiae_contig72:59823..605231691683823.8893282-UTR-L-elsbetiae_contig72:59823..60523Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 59824..60523 -
1622816801.264102-UTR-L-elsbetiae_contig72:61947..619521622816801.264102-UTR-L-elsbetiae_contig72:61947..61952Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 61948..61952 -
1691683823.9260416-UTR-L-elsbetiae_contig72:61947..619521691683823.9260416-UTR-L-elsbetiae_contig72:61947..61952Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 61948..61952 -
1622816801.2748358-UTR-L-elsbetiae_contig72:62694..630221622816801.2748358-UTR-L-elsbetiae_contig72:62694..63022Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 62695..63022 -
1691683823.935479-UTR-L-elsbetiae_contig72:62694..630221691683823.935479-UTR-L-elsbetiae_contig72:62694..63022Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 62695..63022 -
1622816801.284894-UTR-L-elsbetiae_contig72:63430..635141622816801.284894-UTR-L-elsbetiae_contig72:63430..63514Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 63431..63514 -
1691683823.9458878-UTR-L-elsbetiae_contig72:63430..635141691683823.9458878-UTR-L-elsbetiae_contig72:63430..63514Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig72 63431..63514 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816801.2352853-CDS-L-elsbetiae_contig72:60523..605421622816801.2352853-CDS-L-elsbetiae_contig72:60523..60542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig72 60524..60542 -
1691683823.9039488-CDS-L-elsbetiae_contig72:60523..605421691683823.9039488-CDS-L-elsbetiae_contig72:60523..60542Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig72 60524..60542 -
1622816801.2513108-CDS-L-elsbetiae_contig72:60937..619471622816801.2513108-CDS-L-elsbetiae_contig72:60937..61947Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig72 60938..61947 -
1691683823.9138913-CDS-L-elsbetiae_contig72:60937..619471691683823.9138913-CDS-L-elsbetiae_contig72:60937..61947Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig72 60938..61947 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig72.16041.1

>prot_L-elsbetiae_contig72.16041.1 ID=prot_L-elsbetiae_contig72.16041.1|Name=mRNA_L-elsbetiae_contig72.16041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=343bp
MNGHSAVVKALIKAGARLEAVNGMSFTPLHIAAQDGQWEAMNALIAAGAE
VNSRLPDGATPLYLASEGGHTVAVRELRRAKANALLASVSKWGDSRVPLG
IAALQGHSGVIRELIGHGGIEGCGGASGGVGALRCAAEIGHVGILAMLAE
AGVVDSGTALLGAAGLGQTAAVKFLFQQRRGKNKTADGGAYVNTRHPTGR
TPLFCNIMLPRCSPKMVRVLVDAGADTARAFPVTQAGRVFFNDTALTLTT
FQLGKKMVDGKPATEDQLDRLEAIRRLLMRVEAVHAASWLWTSGSFPGNR
AAEAADGATTPSALTSMMPVMRTRARRRGVLLQALFRNSVKP*
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mRNA from alignment at L-elsbetiae_contig72:59824..63514-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig72.16041.1 ID=mRNA_L-elsbetiae_contig72.16041.1|Name=mRNA_L-elsbetiae_contig72.16041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3691bp|location=Sequence derived from alignment at L-elsbetiae_contig72:59824..63514- (Laminarionema elsbetiae ELsaHSoW15)
ACTACCAGCAGTACCAACGGTGCGCCTCTCTAGGCAGATGCTTCAAAGGT GGCCCCCTATATGACAAGCAATGTGTTTCCAAAGGTGGGAGAACATGGCA TATGGGTTACAGGAGCTCCGGATCTGGCCTTGTTCTTGCATTTTATAGTG GCACAGCCATCCACACGTTGACACACCAAGCGACCAATGAAAGCGTAACA TCGGTAACGCTCACTTGACTCCCGGTATCTGTAATCCACCCTGCCAGCAG CCTCGAACTTGCCTGGCCCGCGGCCGATGGGGCTCCGTGACAATAGAGCC CCGAGTCCGCATAGTATGTAGATACTCCTTTTGTGCGAATGTCACGACTG AGCCCCGCGAGGTAACGTGCCGAGGTAGGGGGCACACACAACACGCTTTG CTTGGCTAACGCCGGCCTTGGCCCCGGCTCCCGGCTACGCTAAAACACTG AACCACTCCTCGTGATCTGCAACGCCTCTATTGCACAAACAGGCGAGATG ACGCCCCCATATCAGCAGCAGCGCGGCCCTCCGAACAAACTGCATGATGC CGCACGTTATGGCAGCCCTCAGAGAGTGCTGGATTTGCTCGATGAGTCCA TCGACATCGACCAAGGCACCCCGACCGGATCCACCCCTCGCATGCTAGCA GCTCTGGAAGGACGCTCGCAAATCGTCAGAATTCTCCTGGACAAGGGGGC CAACATGTCAAAACAGGCTGGCAGCTTCACAAGGCCATCTCCCTGTGGTC GTCGACCTTGTTACCGCTGGGGCCGAAGTTGATGCTGGCAACCATAACGG CGACCGAGCCCTCCACCAAGGTGATTAAATGAAGTCATGTTTTCTCCATT GGTCGAGAATGCGAGCATACTACTGCTGTTGTACCTCCAACAAGTAGCGT TGCAATTGGTTCGCTCCAGGACGTTCACCGTCATAATCAGGGTTGCACCT AAATAACCATCTGACTATCTACTCTGTACTCTACTATGCAGGTACTCTTG CTGCTGTACAGTGTGGAGCGAACAATTATGCAGGATTAATTGAACACGTA AACAATATATCTCTCTTCCCTACATGTATGTACGCATAAATACAATGATA GATTTGAACGGGAAAACTACTGTTCCGATATGTCATCAGTAGGCTGTCGG TACTCAATGGCCCAAACGAACGTCAGGAAGCAGCAGCAGCTGTTTAGACC TGCGCAGCTGTGTTGACCTGCACAGCTGTGTTGACAAAGGCGGAGCGTGT TGATGAAGGGCGGAGCGCCCACACAGAAGCACCCGGTTGGTGCTGTTGCT GTGCTTAGGAGGGCAGCTGTTACGTCTGATCTATAACGTGGCGATTAATT AAGGACGGGACCTTCTTTTTGCGGGAAAAGAGGCGTTCGAGTTGACAGAA TCTTTGGTTCAAAGATCTGGGTTATTATTTTTTCTTTCGTCTTGCATCAC CCCCGTCCCCTGTGCTCTCATGAGCTCGCTCCGAAGGGTGACCTTGTACA TGCTACAAATAATACAACCAACCTGCTGTCTTCGGTGTCTTCCTCTTGCC TTTGGCTATTAGCTGCGATGAACGGGCACTCGGCGGTGGTGAAAGCACTG ATCAAGGCAGGCGCGCGCCTGGAAGCGGTGAACGGGATGAGCTTCACGCC GCTTCATATTGCGGCACAAGACGGGCAGTGGGAGGCGATGAATGCGCTGA TCGCGGCTGGCGCTGAAGTGAACAGCCGCTTGCCCGACGGAGCGACACCG CTGTACCTTGCCAGCGAGGGAGGGCACACGGTTGCGGTGCGGGAGCTGCG TCGCGCGAAGGCGAACGCGCTGCTGGCTTCCGTGAGTAAATGGGGGGATT CGCGGGTCCCTTTGGGGATAGCAGCGCTGCAAGGGCACTCGGGGGTGATT CGCGAGCTGATAGGGCACGGCGGGATCGAAGGCTGCGGTGGTGCAAGCGG GGGCGTAGGCGCTCTCCGTTGTGCGGCAGAGATTGGGCACGTCGGCATCT TAGCAATGCTGGCGGAAGCCGGGGTGGTCGACAGCGGCACGGCCCTGCTT GGCGCCGCCGGGCTGGGCCAGACGGCGGCGGTTAAGTTCCTTTTTCAGCA GCGCAGAGGGAAAAATAAAACAGCCGACGGAGGAGCTTACGTCAACACTC GCCACCCTACCGGCCGAACGCCGCTGTTCTGCAACATCATGCTTCCCCGG TGCTCTCCCAAGATGGTGCGGGTCCTCGTGGACGCCGGGGCCGACACGGC GCGCGCCTTCCCGGTCACCCAAGCGGGTCGCGTGTTTTTCAACGACACCG CCCTGACCCTCACGACGTTCCAGCTCGGCAAGAAGATGGTCGACGGCAAA CCCGCCACGGAGGATCAGCTGGACAGGCTGGAGGCCATCCGCCGCTTGCT GATGAGGGTGGAGGCCGTTCACGCGGCCTCTTGGCTGTGGACCAGCGGGA GCTTCCCCGGCAACCGAGCCGCCGAAGCTGCCGACGGGGCCACGACGCCT TCAGCGCTGACATCGATGATGCCGGTGATGAGGACAAGGGCCAGGAGGCG CGGAGTTCTCTTGCAGGCCCTGTTCAGGTGGGCGGTGATACAATATGACG CTTTGGGGCTGAGCTTTACACTAGCGGTCGTACCGCATGTCGTTTTGGTG TGGCGTATCGTCCCGCGTCTACTGTAAACTGACTCGTGTTTTCTTTACTG TGCTCGTTTGTCATGTGTTGCACCGGGGAGCGTGACTTCTCACGTTGGCT TACTGTTTCGGGTTTCTGGGCTTTTTTCGCTGCGAGGGTTGCTCCAGGAG ATAAACTCAGCCGGATCGGACAAACAACGCCCGTCATGTTGCTATTTTCG TTGCCCCCGTCTTATATACACTCCTCGCGGAAGTGTTTGTTCGAGATTCG AGACAACCACAAACCGACGCTTTTTTCGCACACATTCGTTCGTCTTGGCC TTTCCGCCTGTCTCTTTTGCAGGAATTCTGTGAAGCCTTGATCGGGATCA GCACGCGGAACATCACGTTGCCGTTAATCTCTAGGTTCGCCGCGATCAAC GGGGGGTGGCGTATGTTGGGACTGCACATGCATCAGCTGCAGCAGAAGCC AGGGTAGCGCTGTCGAAGTTTTGCATGGGAGTGGGTGTTTTGGGCGGTGG TTTGTTCACTATGTGCGCCGAGCTGAGTTGTGGCTCGAGGGCTAGAACCG GGCGACAAGAGCGTCGACAGCGGTTGTGGCCGCAAGCCGCCTACTTTTTA TTTGAGCTCAACCGATGTCGTTCTCCCTGACACCAAATTGGCTGGTGGTT TATGTAGCCAGAATCACGCTGTGTTTGCTGGCTCTCAAGGTCCGGAGATG TTGTGTGGATGCCTGGCGTCTTGGTTGTTCGCAGCAACCTATGCAGGCTA TGCGGGTTAGTGCGGCCTGCTACCGGGGTTCGGTGCTTTCGACGGCTCGG TTTGGACGTGCAAGCTTGTTCATGCTCAACAGGAGGATACTTGCGAGCGG TTTGGCATAAGTAAGTAACCGCCGTGTGTGGGGACGCGTTTTATCCTTCG GGTGTTCAGTTGGTACGAGGAACAAGAGCCAGGGAATGGTGCCCCTTCGG GCCCGTTCTTTTGGCGCGATTGTCCAGGCTGTTTAAGGGTGGACCACGCA GTACAGCTTCGAAATCCCGGGCAGAGTATCCAGGAGAGTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig72:59824..63514-

>mRNA_L-elsbetiae_contig72.16041.1 ID=mRNA_L-elsbetiae_contig72.16041.1|Name=mRNA_L-elsbetiae_contig72.16041.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2058bp|location=Sequence derived from alignment at L-elsbetiae_contig72:59824..63514- (Laminarionema elsbetiae ELsaHSoW15)
ATGAACGGGCACTCGGCGGTGGTGAAAGCACTGATCAAGGCAGGCGCGCG
CCTGGAAGCGGTGAACGGGATGAGCTTCACGCCGCTTCATATTGCGGCAC
AAGACGGGCAGTGGGAGGCGATGAATGCGCTGATCGCGGCTGGCGCTGAA
GTGAACAGCCGCTTGCCCGACGGAGCGACACCGCTGTACCTTGCCAGCGA
GGGAGGGCACACGGTTGCGGTGCGGGAGCTGCGTCGCGCGAAGGCGAACG
CGCTGCTGGCTTCCGTGAGTAAATGGGGGGATTCGCGGGTCCCTTTGGGG
ATAGCAGCGCTGCAAGGGCACTCGGGGGTGATTCGCGAGCTGATAGGGCA
CGGCGGGATCGAAGGCTGCGGTGGTGCAAGCGGGGGCGTAGGCGCTCTCC
GTTGTGCGGCAGAGATTGGGCACGTCGGCATCTTAGCAATGCTGGCGGAA
GCCGGGGTGGTCGACAGCGGCACGGCCCTGCTTGGCGCCGCCGGGCTGGG
CCAGACGGCGGCGGTTAAGTTCCTTTTTCAGCAGCGCAGAGGGAAAAATA
AAACAGCCGACGGAGGAGCTTACGTCAACACTCGCCACCCTACCGGCCGA
ACGCCGCTGTTCTGCAACATCATGCTTCCCCGGTGCTCTCCCAAGATGGT
GCGGGTCCTCGTGGACGCCGGGGCCGACACGGCGCGCGCCTTCCCGGTCA
CCCAAGCGGGTCGCGTGTTTTTCAACGACACCGCCCTGACCCTCACGACG
TTCCAGCTCGGCAAGAAGATGGTCGACGGCAAACCCGCCACGGAGGATCA
GCTGGACAGGCTGGAGGCCATCCGCCGCTTGCTGATGAGGGTGGAGGCCG
TTCACGCGGCCTCTTGGCTGTGGACCAGCGGGAGCTTCCCCGGCAACCGA
GCCGCCGAAGCTGCCGACGGGGCCACGACGCCTTCAGCGCTGACATCGAT
GATGCCGGTGATGAGGACAAGGGCCAGGAGGCGCGGAGTTCTCTTGCAGG
CCCTGTTCAGATGAACGGGCACTCGGCGGTGGTGAAAGCACTGATCAAGG
CAGGCGCGCGCCTGGAAGCGGTGAACGGGATGAGCTTCACGCCGCTTCAT
ATTGCGGCACAAGACGGGCAGTGGGAGGCGATGAATGCGCTGATCGCGGC
TGGCGCTGAAGTGAACAGCCGCTTGCCCGACGGAGCGACACCGCTGTACC
TTGCCAGCGAGGGAGGGCACACGGTTGCGGTGCGGGAGCTGCGTCGCGCG
AAGGCGAACGCGCTGCTGGCTTCCGTGAGTAAATGGGGGGATTCGCGGGT
CCCTTTGGGGATAGCAGCGCTGCAAGGGCACTCGGGGGTGATTCGCGAGC
TGATAGGGCACGGCGGGATCGAAGGCTGCGGTGGTGCAAGCGGGGGCGTA
GGCGCTCTCCGTTGTGCGGCAGAGATTGGGCACGTCGGCATCTTAGCAAT
GCTGGCGGAAGCCGGGGTGGTCGACAGCGGCACGGCCCTGCTTGGCGCCG
CCGGGCTGGGCCAGACGGCGGCGGTTAAGTTCCTTTTTCAGCAGCGCAGA
GGGAAAAATAAAACAGCCGACGGAGGAGCTTACGTCAACACTCGCCACCC
TACCGGCCGAACGCCGCTGTTCTGCAACATCATGCTTCCCCGGTGCTCTC
CCAAGATGGTGCGGGTCCTCGTGGACGCCGGGGCCGACACGGCGCGCGCC
TTCCCGGTCACCCAAGCGGGTCGCGTGTTTTTCAACGACACCGCCCTGAC
CCTCACGACGTTCCAGCTCGGCAAGAAGATGGTCGACGGCAAACCCGCCA
CGGAGGATCAGCTGGACAGGCTGGAGGCCATCCGCCGCTTGCTGATGAGG
GTGGAGGCCGTTCACGCGGCCTCTTGGCTGTGGACCAGCGGGAGCTTCCC
CGGCAACCGAGCCGCCGAAGCTGCCGACGGGGCCACGACGCCTTCAGCGC
TGACATCGATGATGCCGGTGATGAGGACAAGGGCCAGGAGGCGCGGAGTT
CTCTTGCAGGCCCTGTTCAGGAATTCTGTGAAGCCTTGAGAATTCTGTGA
AGCCTTGA
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