prot_L-elsbetiae_contig72.16037.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig72.16037.1
Unique Nameprot_L-elsbetiae_contig72.16037.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length487
Homology
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: D7FNE3_ECTSI (Similar to zinc finger CCCH-type containing 12C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE3_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 9.190e-43
Identity = 86/169 (50.89%), Postives = 116/169 (68.64%), Query Frame = 0
Query:  298 SATPGIPPLVVIDGSNTAFAYREGG---GRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPEAHVIKELTRHATDKR 463
            SA+PG   LV IDGSN AFA+ +G     RW   GP  AIQ+F+ RG+  V F+P  R+ ++   D+ YP F+EA  SG I  VPA  NDDL+ L+YAI + A VVSND+FRDH+ +  TLA LG + AEL+ +L+ HQV YTFAR EF+P+PEA++I+ +T+   +KR
Sbjct:  391 SASPGTT-LVAIDGSNVAFAFSDGSMGEKRWSFRGPSAAIQFFKRRGIPCVIFVPNWRMSTLTRNDECYPEFEEALRSGEICRVPANKNDDLFILRYAIGKKAYVVSNDQFRDHARSSQTLAALGLNAAELQAFLAQHQVCYTFARAEFIPDPEANLIRMITQQEAEKR 558          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: D7FTY5_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY5_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 6.870e-38
Identity = 81/156 (51.92%), Postives = 104/156 (66.67%), Query Frame = 0
Query:  305 PLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPEAHVIKELTRHAT 460
            PLVVIDG++ A  Y     RW A  PLLAIQ+F++RGV  VAF+PR RV  V P+DD Y AF EAR+  AIS +P G N  L+ LK+AI+ NA VV+N +   H A+  TLA LG+++ EL  YLS   V YTFA D+F P+PEA +IK   + A+
Sbjct:  649 PLVVIDGTDIALTYWRTDDRWSALQPLLAIQFFKERGVPCVAFLPRERVYGVTPQDDFYTAFHEARSRRAISEIPQGANASLFILKHAIENNAYVVTNAQLSGHIASPATLASLGQTKNELHSYLSRSHVRYTFAGDDFTPDPEAPLIKMFAKQAS 804          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: A0A6H5KK30_9PHAE (RNase NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK30_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.960e-36
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 0
Query:  304 PPLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPEAHVIKELTRHA 459
            P  VVIDG++ A  +R   G+W A+G LLAIQ+FE RGV  VAF+PR R+  V P D    AFQEARA GAI+ +P G   DL  LKYAI+    VV+N +   H+ +++ LA LG+++ +LR+YLS + V YTF R++F PNPE   I+ L   A
Sbjct:  661 PKKVVIDGNDVALCHRGAHGQWSAQGALLAIQFFERRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAINEIPRGEKADLSILKYAIESKVHVVTNKKLSTHATSNEALAFLGQTKQDLREYLSHYHVCYTFVRNDFKPNPETPFIRMLLNQA 816          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: A0A6H5KJR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJR8_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 6.570e-27
Identity = 79/212 (37.26%), Postives = 103/212 (48.58%), Query Frame = 0
Query:  305 PLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDSVRPED--------------------------------------------------------DVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPEAHVIKELTRHAT 460
            PLVV+DG++ A  Y     RW A  PLLAIQ+F++ GV  VAF+PR RV SV  +D                                                        D Y AF EAR+  AIS +P G N  L+ LK AI+ NA VV+N +   H A+  TLA LG+++ EL+ YLS   V YTFA D+F P+PEA +IK   + A+
Sbjct:  604 PLVVLDGTDIALTYWRTDDRWSALQPLLAIQFFKEWGVPCVAFLPRERVCSVTLQDGGSPTSFEGGFLRSDLVHKDMRRPVVGVRAGSYSLLTFGMPRPNPFNPVGSSPLVTDFYTAFHEARSRRAISEIPQGANASLFILKRAIEHNAYVVTNAKLSGHIASPATLASLGQTKNELQSYLSRSHVRYTFAGDDFTPDPEAPLIKMFAKQAS 815          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: D7FTX8_ECTSI (RNase NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX8_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.670e-26
Identity = 60/112 (53.57%), Postives = 76/112 (67.86%), Query Frame = 0
Query:  304 PPLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTL 415
            P  VVIDG++ A  +R   G+W A+GPLLAIQ+FE RGV  VAF+PR R+  V P D    AFQEARA GAIS +P G   DL+ LKYAI+    VV+N R   H+A+++TL
Sbjct:  673 PKKVVIDGNDVALCHRGADGQWSAQGPLLAIQFFEQRGVPCVAFLPRERMAGVSPRDGCNTAFQEARAKGAISEIPRGEKGDLFILKYAIESKVHVVTNKRLSTHAASNETL 784          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: R7Q260_CHOCR (RNase NYN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q260_CHOCR)

HSP 1 Score: 89.0 bits (219), Expect = 4.410e-15
Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 0
Query:  305 PLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDS---VRP-------EDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNP 447
            P V+IDG N    Y E    + + G  LA+ Y+   G++++A +PR +VD    +RP        DD      E  + G +   PAG +DD + L+YA+ + A V+SNDRF       +T   +     ++R +L  H + YTF   +FVPNP
Sbjct:  472 PTVIIDGQNVGRDYGENDHIFQSRGVKLALDYYAANGIRALALLPRNKVDQRTYLRPGVRNTLVADDPE-LLNELHSQGRVYFTPAGSHDDFFILRYAMRKEADVISNDRFIKELEMQETAEDV----RDMRTFLETHLIPYTFIGQDFVPNP 619          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: UPI000644C6F7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C6F7)

HSP 1 Score: 87.4 bits (215), Expect = 1.660e-14
Identity = 53/158 (33.54%), Postives = 80/158 (50.63%), Query Frame = 0
Query:  305 PLVVIDGSNTAFAYREGGGRWFAEGPLL-AIQYFEDRGVKSVAFIP------RP-------RVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPE 448
            P++VIDG N A  Y  G  + F+   +  AI+Y+  RG + + F+P      +P       R+   +P  D    F E    G + M P    DD Y ++YA    A +V+NDR+ DH    +T A     R + R ++  H +S+TFAR EF+PNP+
Sbjct:  647 PMIVIDGPNVALKY--GNSKTFSVLAIKKAIEYYSQRGFEVITFVPEHVATRKPSGPNAPMRITDFQPFVDDMKMFNELVEKGLVCMTPPQDYDDSYAIQYAKKHGAMIVTNDRYNDHINKQETEA----ERQKARRFIREHCISFTFARHEFLPNPD 798          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: D3B617_POLPP (RNase NYN domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B617_POLPP)

HSP 1 Score: 83.2 bits (204), Expect = 4.070e-13
Identity = 53/157 (33.76%), Postives = 79/157 (50.32%), Query Frame = 0
Query:  306 LVVIDGSNTAFAYREGGGRWFAEGPLL-AIQYFEDRGVKSVAFIPRP-------------RVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPE 448
            LVVIDG N A  Y  G    F+   +  A+ Y+  RG ++VAF+P               ++   +P  D +  FQE  A   + + P    DD Y ++YA   NA +V+NDR+ DH    +T A     R + R ++  H +S+TF R EF+PNP+
Sbjct:  785 LVVIDGPNVALKY--GKKNCFSVIAIKKALDYYIQRGYEAVAFVPESVASRKPTGPNAPMKLLDFQPVVDNFAMFQELVARELVCLTPPQDYDDSYAIQYAKKHNAIIVTNDRYNDHINKQETDA----ERQKARKFIREHCISFTFVRQEFLPNPD 935          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: A0A8J4PVQ7_9MYCE (RNase NYN domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PVQ7_9MYCE)

HSP 1 Score: 82.4 bits (202), Expect = 7.070e-13
Identity = 51/156 (32.69%), Postives = 76/156 (48.72%), Query Frame = 0
Query:  307 VVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPRPRVDSVRPED--------------DVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPE 448
            +VIDG N A  Y     ++   G   A+ Y++ RG + VAF+P          D              D   AFQ+   SG +S+ PA   DD+Y + YA   NA +V+NDR+     ND         + ++R ++  H +S+TF RDEF+PNP+
Sbjct:  764 IVIDGPNVAKKYGTK-KKFSVMGLKKALDYYDQRGYEVVAFVPESYASRKNHHDPKKNFTLFEYQDVADDLVAFQKLTESGKVSLTPAQDYDDIYTIHYARMHNACIVTNDRY-----NDIIDKCQESEKQKIRKFIRDHCISFTFVRDEFLPNPD 913          
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Match: A0A7J6SE35_PEROL (RNase NYN domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SE35_PEROL)

HSP 1 Score: 79.3 bits (194), Expect = 2.940e-12
Identity = 50/169 (29.59%), Postives = 84/169 (49.70%), Query Frame = 0
Query:  305 PLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIP----------------RPRVDSVR---------PEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVVSNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPE 448
            PL++IDG N A   R GG ++  +G  + + Y+  RG + + F+P                + +V +V          P D++     + +  G +++ P+   DD Y L+YA+ ++A +VSND +RD          L   ++E   +L  H VSYTF +DEF+PNP+
Sbjct:  246 PLILIDGPNVA--NRHGGQQFTCKGLQICVDYYTSRGHEVMVFLPDYLVNRNELFRLRNAQKMKVQTVHGIKAAPTHIPVDNIG-ILLKLQTQGRLALTPSKDYDDSYCLQYALKKDAVIVSNDMYRDW-----VKKQLSWKKSESIQWLRTHVVSYTFVKDEFMPNPD 406          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig72.16037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNE3_ECTSI9.190e-4350.89Similar to zinc finger CCCH-type containing 12C n=... [more]
D7FTY5_ECTSI6.870e-3851.92RNase NYN domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KK30_9PHAE1.960e-3648.72RNase NYN domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KJR8_9PHAE6.570e-2737.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTX8_ECTSI3.670e-2653.57RNase NYN domain-containing protein n=1 Tax=Ectoca... [more]
R7Q260_CHOCR4.410e-1533.33RNase NYN domain-containing protein n=1 Tax=Chondr... [more]
UPI000644C6F71.660e-1433.54hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3B617_POLPP4.070e-1333.76RNase NYN domain-containing protein n=1 Tax=Polysp... [more]
A0A8J4PVQ7_9MYCE7.070e-1332.69RNase NYN domain-containing protein n=1 Tax=Polysp... [more]
A0A7J6SE35_PEROL2.940e-1229.59RNase NYN domain-containing protein n=1 Tax=Perkin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 307..446
e-value: 2.7E-11
score: 43.5
NoneNo IPR availableGENE3D3.40.50.11980coord: 306..458
e-value: 7.8E-29
score: 102.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig72contigL-elsbetiae_contig72:38401..43043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig72.16037.1mRNA_L-elsbetiae_contig72.16037.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig72 38015..43106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig72.16037.1 ID=prot_L-elsbetiae_contig72.16037.1|Name=mRNA_L-elsbetiae_contig72.16037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=487bp
MSWLPWPPLWPPGLNSSSPQPSADTGKHANLLEAPPAVPPPAAAGSPAAA
GSWDFASGGGWSVACRVGHQHQEASATASSGQFSQSSRPKRKREEEPTVA
RASGAEINQQSAASERNLASMDSMMDVDDGAAGGVGTDAGRVSKKSREAA
PGPDSSPPQPPQSWTRGKFRITHHSAVPGENGPLFSPGKRPLAPAAGERR
WRGGTRKDNNRSLLRGPPPPPGRASRLSSAAAGRSRFSPAAGPSSSSSSS
SRFSFGASSSSKFSFGASSSSSSRFSFGEKGAAAFSATNTDDGDGSNSAT
PGIPPLVVIDGSNTAFAYREGGGRWFAEGPLLAIQYFEDRGVKSVAFIPR
PRVDSVRPEDDVYPAFQEARASGAISMVPAGGNDDLYFLKYAIDRNAPVV
SNDRFRDHSANDDTLAMLGRSRAELRDYLSGHQVSYTFARDEFVPNPEAH
VIKELTRHATDKRARPSCEARGAPSSHPSPEPPWPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN