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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 784 |
| Cds size | 645 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816800.3978672-UTR-L-elsbetiae_contig72:25111..25179 | 1622816800.3978672-UTR-L-elsbetiae_contig72:25111..25179 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig72 25112..25179 + |
| 1691683823.282454-UTR-L-elsbetiae_contig72:25111..25179 | 1691683823.282454-UTR-L-elsbetiae_contig72:25111..25179 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig72 25112..25179 + |
| 1622816800.4340029-UTR-L-elsbetiae_contig72:27372..27443 | 1622816800.4340029-UTR-L-elsbetiae_contig72:27372..27443 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig72 27373..27443 + |
| 1691683823.31277-UTR-L-elsbetiae_contig72:27372..27443 | 1691683823.31277-UTR-L-elsbetiae_contig72:27372..27443 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig72 27373..27443 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816800.4130232-CDS-L-elsbetiae_contig72:25179..25759 | 1622816800.4130232-CDS-L-elsbetiae_contig72:25179..25759 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig72 25180..25759 + |
| 1691683823.2921238-CDS-L-elsbetiae_contig72:25179..25759 | 1691683823.2921238-CDS-L-elsbetiae_contig72:25179..25759 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig72 25180..25759 + |
| 1622816800.4236157-CDS-L-elsbetiae_contig72:27307..27372 | 1622816800.4236157-CDS-L-elsbetiae_contig72:27307..27372 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig72 27308..27372 + |
| 1691683823.3023653-CDS-L-elsbetiae_contig72:27307..27372 | 1691683823.3023653-CDS-L-elsbetiae_contig72:27307..27372 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig72 27308..27372 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig72.16035.1 >prot_L-elsbetiae_contig72.16035.1 ID=prot_L-elsbetiae_contig72.16035.1|Name=mRNA_L-elsbetiae_contig72.16035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp
MADVKSKRCTHHGCTKQPSYGKEGSKAEYCRDHAEDGMVNVVSKRCAIPG
CTTRASSGEENTGTRKKCARHAEEGVICICGRSSGDSNVGGGTDDAGARG
IGTASLVGSGARRRSRAPLPSPAEPSSGRTREVNKRARRSAGSGDIHPVQ
VKREGADNRGPDDEKPGACPEPGGVVKTEGLEVFCKAEPAEGAGDAGQAK
KKRRKATRGAPRGS* back to topmRNA from alignment at L-elsbetiae_contig72:25112..27443+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig72.16035.1 ID=mRNA_L-elsbetiae_contig72.16035.1|Name=mRNA_L-elsbetiae_contig72.16035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2332bp|location=Sequence derived from alignment at L-elsbetiae_contig72:25112..27443+ (Laminarionema elsbetiae ELsaHSoW15)
GCAAGATAGCGTCATGCGGCAAGGAAGGCAGCAAGGCAGAGTACTGCCGT
GACCATGCCAAGGACGGGATGGCGGACGTGAAGAGCAAGAGATGCACCCA
CCACGGTTGCACCAAGCAGCCATCATACGGCAAGGAAGGCAGCAAGGCAG
AGTACTGCCGTGACCATGCTGAAGACGGGATGGTGAATGTCGTCAGCAAG
AGATGTGCCATTCCGGGGTGCACCACAAGGGCCAGCTCCGGCGAGGAAAA
CACTGGCACCCGGAAAAAATGCGCACGACACGCAGAGGAAGGCGTTATTT
GTATTTGTGGCCGCTCCAGCGGGGACAGCAACGTAGGTGGTGGAACTGAT
GACGCGGGAGCAAGGGGTATTGGTACCGCCAGCCTTGTCGGCTCCGGTGC
AAGGCGGAGGAGCCGCGCTCCGTTGCCCTCCCCGGCGGAGCCCTCCTCGG
GAAGGACCAGGGAGGTCAACAAACGAGCCCGCCGGAGTGCTGGCAGTGGG
GACATACACCCAGTTCAGGTGAAGAGAGAGGGGGCTGACAACCGGGGGCC
CGACGACGAGAAGCCTGGAGCATGTCCAGAGCCAGGAGGTGTGGTGAAGA
CGGAAGGCCTGGAAGTTTTCTGCAAGGCGGAACCGGCGGAAGGTGCAGGT
GCGTTTCAACCGTGTCTAGGGCACCATCGTGACATGATGACGTGCTCGTG
CCAGTATTTGCTTGTGGGATATACTCTACGTGTGGGAGTGTGTGGCTGGA
GATAGATGTGTTCGACTGTATATGGATTGATACCTGCGTACATATTGTTG
AACACTTTTCAAAGTCTCACCTCGGCTGCCGGCAACATACCTTCTCGTCA
ACGTTTTCACTAAATTGCTTTTGCTCCAATTTGGAGAGCGGGTCTATGTA
AACGATTTTCTCCATGGCGCAGCAGGTAGGTATAGGTGTATTCAAGTCGC
TTTTTCAACGAAAGAACGAGATCATCTCTTACCACTGTAGATATCCCCGC
ATCTTACTTGATATTTTCGATAGTAGTTGCAGATTCTGTCAAGAAAACAA
AGAATCTGCTTCAGGCCAGTTCTTATGGTCTCAGAAAAGTGGGTAGGAAA
TGGTTTTATGCCTGGTTCGCGGAGAAACCCCTAGGCCAATTAAGAAAATG
TTCCGAAGCCTGCTTAATTCCAGCCGAACTGGCCGTCGATCCCTTGCATT
TGCCACACAAGCCACCGAGGGCAACTCTGCTGAAGGGTCATGATGCTCAG
TAACATGGAGCTCACTGTCTCAAGAGTAGATAACAACCCATGAGCAGGAG
GGCGAGGAATCGCTGTGTGCGTGTGTTTCTCGGGTGATTGCACCTTTTCT
CACCACCGTTTTTTGGTAGGAAAACCAGGCAATTTTCTCACCCAACAAAC
GCTTTCTGAGAACGGTGAGAAATGTCGTTGGCCATTCGCATTTGCCCCAC
AGGCCACCAAAAAAACTCTGCTTGACATTAGCGATGCTCGTCAACATGGA
GCTTGTATTCTGAAGGCTAGATCGTGATCCGTGAGCAGGAGGGCGAGCAA
TCGGTGGTACCGTGCGTTTTCGGGCCGTTGCACTATTTCCCATCGGCATT
TTCTGCCCTCCGAAGGGGTTTCTCCGCGAACCAGGCATAAAACCATTTCC
TACCCACTTTTCTGAGACCATAAGAACTGGCCTCAGCAAGATCCTGGGTG
TATTTATGAGTAATTTGGCCGCTTGAACCCGCTAAAATAATGCATGGAAA
CTTCTTTGTGTGATCGGCGTAACTTTCGAGGAAATACCTCGGCGAACGGA
CAGCTTACGATTACACAGCGGAATGTTGCTTCTATGGTTGGACGCACATT
GGACTGCATTCGCTTGCTTTGTACTGGAGCCAGAGCTCGTGTCTTCAGTT
GAATGATTTCCGACTTCCCTACGTCATAATGTTTTTTTGGAGTCTTTCGC
CGTTCGCTGTTGACCGTCAGAGTGGTTTCGTACGTACCATTGCCCAAATA
AATGCTCACAGTTTTGCCATCAAGACGAAGCTGTGTATTGCCATCGCGTT
GTGGCATGACCAATCTCAGTGACGAGCACCAGACTCCACGGCCCCTGTTG
CTCTCGTTTTAACCCGGCCCTGTTTGCTTGCTTACCTATCATCACCCTGG
TGTGTGCATCTTATGTCCCCCCTCCCTCCCTCCAATCCAAACTCAGGCGA
TGCAGGGCAAGCGAAGAAGAAGAGGAGAAAGGCCACGAGGGGGGCGCCGC
GAGGCTCCTGACATGGCAGTACATACATAGCACCAGCAGCAACAAACGGG
TGTGCATGGTGCTCTACGCGATGGATTGTGAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig72:25112..27443+ >mRNA_L-elsbetiae_contig72.16035.1 ID=mRNA_L-elsbetiae_contig72.16035.1|Name=mRNA_L-elsbetiae_contig72.16035.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig72:25112..27443+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGACGTGAAGAGCAAGAGATGCACCCACCACGGTTGCACCAAGCA
GCCATCATACGGCAAGGAAGGCAGCAAGGCAGAGTACTGCCGTGACCATG
CTGAAGACGGGATGGTGAATGTCGTCAGCAAGAGATGTGCCATTCCGGGG
TGCACCACAAGGGCCAGCTCCGGCGAGGAAAACACTGGCACCCGGAAAAA
ATGCGCACGACACGCAGAGGAAGGCGTTATTTGTATTTGTGGCCGCTCCA
GCGGGGACAGCAACGTAGGTGGTGGAACTGATGACGCGGGAGCAAGGGGT
ATTGGTACCGCCAGCCTTGTCGGCTCCGGTGCAAGGCGGAGGAGCCGCGC
TCCGTTGCCCTCCCCGGCGGAGCCCTCCTCGGGAAGGACCAGGGAGGTCA
ACAAACGAGCCCGCCGGAGTGCTGGCAGTGGGGACATACACCCAGTTCAG
GTGAAGAGAGAGGGGGCTGACAACCGGGGGCCCGACGACGAGAAGCCTGG
AGCATGTCCAGAGCCAGGAGGTGTGGTGAAGACGGAAGGCCTGGAAGTTT
TCTGCAAGGCGGAACCGGCGGAAGGTGCAGATGGCGGACGTGAAGAGCAA
GAGATGCACCCACCACGGTTGCACCAAGCAGCCATCATACGGCAAGGAAG
GCAGCAAGGCAGAGTACTGCCGTGACCATGCTGAAGACGGGATGGTGAAT
GTCGTCAGCAAGAGATGTGCCATTCCGGGGTGCACCACAAGGGCCAGCTC
CGGCGAGGAAAACACTGGCACCCGGAAAAAATGCGCACGACACGCAGAGG
AAGGCGTTATTTGTATTTGTGGCCGCTCCAGCGGGGACAGCAACGTAGGT
GGTGGAACTGATGACGCGGGAGCAAGGGGTATTGGTACCGCCAGCCTTGT
CGGCTCCGGTGCAAGGCGGAGGAGCCGCGCTCCGTTGCCCTCCCCGGCGG
AGCCCTCCTCGGGAAGGACCAGGGAGGTCAACAAACGAGCCCGCCGGAGT
GCTGGCAGTGGGGACATACACCCAGTTCAGGTGAAGAGAGAGGGGGCTGA
CAACCGGGGGCCCGACGACGAGAAGCCTGGAGCATGTCCAGAGCCAGGAG
GTGTGGTGAAGACGGAAGGCCTGGAAGTTTTCTGCAAGGCGGAACCGGCG
GAAGGTGCAGGCGATGCAGGGCAAGCGAAGAAGAAGAGGAGAAAGGCCAC
GAGGGGGGCGCCGCGAGGCTCCTGAGCGATGCAGGGCAAGCGAAGAAGAA
GAGGAGAAAGGCCACGAGGGGGGCGCCGCGAGGCTCCTGA back to top
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