mRNA_L-elsbetiae_contig7192.16029.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 645 bits (1663), Expect = 1.760e-222 Identity = 320/467 (68.52%), Postives = 372/467 (79.66%), Query Frame = 3 Query: 255 AESPGCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGETCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVR---------GFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVDNISSDEGIDVPESTFVGSDGLP 1628 AES GCFT+TD+YN+RGT + G SSKGP++ LD +GS + P + VT KWLL AELY+TNG+IFYC G+ GGDCDELRIQS GP DWYEVRGHGGSMYF T+VTSWDT K PQE YEGGRS+LNCVSEKLTGETC G AKNDMGECRMDII+SE+GY+G+ ++ESYGLTWKVR GFCKDLSN DVF+ TNVYG+I SDIHH YYG YSYGHQGGVWTNN+MH NHQY +A NKVYNN+NHGIIASKRCN+V+IYDN+VSDGGPDAVGIFLHRSSD A V+GN I NM DAGIALLES +ADI+DN IDG Q+GIRMSLGS GN+VYDN FN C +GL+TY GSD P VS+GRP+ NTF++N +T++AGGVK K SDN++V+NN FTGT ELEF+D+Q T WSGN+LP GVC+DNI+SD+G VP STF S G+P Sbjct: 17 AESEGCFTLTDLYNFRGTENDG---SSKGPLYMLDGSGSKITAP----TSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPD--VSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPS-GVCIDNITSDDGNSVPPSTFSSSSGVP 461
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 605 bits (1559), Expect = 6.960e-206 Identity = 301/463 (65.01%), Postives = 367/463 (79.27%), Query Frame = 3 Query: 255 AESPGCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGETCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVDNISSDEGIDVPESTFVG-SDGLP-LDC 1637 AE GCFT+TD+YN+R + S G S+KGPIF LDD+ + V NP ++NKWLL AEL++T G++FYC+G++ GGDCDELRIQS GPTD++EVR HGGSMYFE TIVTSWDT K PQ Y GGRS+LNCVSEKLTGE CVG+A+N+MGECRMDII+SEIGYLG+ ++ESYGLTWKVRGFCKDLSN DVFD TNVYGN++ SDIHHNYYG YSYGHQGGVW NN+MH NHQYGFDPHDDSD+L IIASKRCN+VQIY+NEV DGGP A GIFLHRSSD A+VH N + +M+DAG+A+LESM+ADIY+N ++GIR+SLGS+ N+V++N F GL+TYQGSD PT+GVS GRPS+N F++N I + GVK+K D+ ++++NVFTGT+ELEFFD+Q TRW GNTLP GVC+ NI SD+GID+ STF + GLP L+C Sbjct: 82 AEGEGCFTITDLYNFR--LESDG--SAKGPIFNLDDSYNTVLNP----KVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQ-GVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 592 bits (1527), Expect = 6.710e-196 Identity = 307/491 (62.53%), Postives = 362/491 (73.73%), Query Frame = 3 Query: 162 VMTIPSSCASGTI-PTFRYSNSSGQVGMGRLYAESPGCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGETCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVDNISSDEGIDVPESTFVGSDGLPL 1631 +M I SSC P+FRY+ SSG G RLYAE GCFTMTD+YN+RGT + G SSKGP++ LDD G+ ++ P S +TN WLLAAELY+T G +FYCKGT+ GGDC++LRIQS G D++EVRGHGGS+YFEDTIVTSWDT K PQE YE GRS+LNCVSEKLTG+ C G AKN+MGECRMDII+SEI YLG+ ++ESYG+TWKVRGFCKDLSN +VF+ TNVYG++ SDIHH YYG YSYGHQGGVWTNNKMH N QYGFDPHDDSD+L IA N+VYNN NHGIIASKRCN+V+I++NEV DGG A GIFLHRSSD A V NTITNM+DAGIA+LES DA IY N+I+GA+YGIRMSLGS N VY NSF YGL+TY+GSD P VS GRPS N N + D GVK+K D+ N F EF +S T WSGN + D C++ D+ D GSD +P+ Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSGVAG--RLYAEGEGCFTMTDLYNFRGTENDG---SSKGPVYMLDDDGTKLDIP----SGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPD--VSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG--CIEE---DDEFDAAS----GSDSIPI 884
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 6.440e-185 Identity = 273/458 (59.61%), Postives = 344/458 (75.11%), Query Frame = 3 Query: 267 GCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGE-TCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVDNISSDEGIDVPESTFVGSDGLPLDC 1637 GCFT++D+Y W+G ++G +SKGP+F LD V E + T KWLL A+L++T G+ YC+G GG+C ELRI+S +D++E+RGHGG++YFEDTIVTSWD + + PQE Y+ GRS++ CVSE LTGE TC A N+MGECRMDIIDSE+GYLG+ +E+YG+TWKVRGFC DLSN DVFD NVYG++ SDIHH YYGMYS+GHQGGVWTNN MH NHQYGFDPHDDSD+LIIA NKVYNN NHGIIASKRCN+V+IYDNEV DGG DA GIFLHRS D + V+GNTITNM DAGIA+LE+ DI+DN +DG ++GIR+ LGS+ N V+DN F + G+FTY GSD P V GRP +N F +N+I T GVK+K SDN+ ++NN F+GTTE+EF ++ WSGN++P C+++I ++ STF GS GLPL+C Sbjct: 10 GCFTLSDLYAWQGFYNNG---NSKGPVFVLDSNDRVDET----ATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPW--VGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPT-NTCLEDIDNN-------STFTGSSGLPLEC 447
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 502 bits (1293), Expect = 2.970e-168 Identity = 257/425 (60.47%), Postives = 299/425 (70.35%), Query Frame = 3 Query: 354 LDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGETCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVDNISSDEGIDVPESTFVGSDGLP 1628 LDD+G+ + +P + VT KWLL +ELY+T+G+IFYC G+ GGDCDELRIQS GP DWYEVRGHGGSMYF T+VTSWDT K PQE YEGGRS+LNCVSEKLTGETC GKAKND GECRMDII+SE+GY+G+ +AESYGLTWKVRGFCKDLSN DVF+ TNVYG+I S+IHH YYGMYSYGHQGGVWTNN+MH NHQYGFDPHDDSD+L IA ASKRCN+VQIY+NEVSDGGP+AVGIFLHRSSD A V+G G DAP VS+GRP+ NTF++N IT+TAGGVK+K SDN+++SNN FTGT ELEFFD+Q T WS N+LP GVC+DN++SD+G VP STF S G+P Sbjct: 2 LDDSGNKITSP----TSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPD--VSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPS-GVCIDNVTSDDGNSVPPSTFSSSSGVP 364
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 477 bits (1228), Expect = 1.100e-158 Identity = 237/349 (67.91%), Postives = 274/349 (78.51%), Query Frame = 3 Query: 279 MTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGETCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWK--------VRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSF 1301 MTD+YN+RGT G SSKGP++ LDD G+ ++ P S +TN WLLAAELY+T G +FYCKGT+ GGDC++LRIQS G D++EVRGHGGS+YFEDTIVTSWDT K PQE YEGGRS+LNCVSEKLTG+ C G AKN+MGECRMDII+SEI YLG+ ++ESYG+TWK VRGFCKDLSN +VFD TNVYG+++ SDIHH YYG YSYGHQGGVWTNNKMH N QYGFDPHDDSD+L IIASKRCN+V+I++NEV DGG AVGIFLHRSSD A V NTITNM+DAGIALLE+ DA IY N I+GA+YGIRMSLGS N VY NSF Sbjct: 1 MTDLYNFRGTEKDG---SSKGPVYMLDDDGTKLDIP----SGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSF 330
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 411 bits (1056), Expect = 1.470e-126 Identity = 229/471 (48.62%), Postives = 303/471 (64.33%), Query Frame = 3 Query: 243 GRLYAESPGCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTG--ETCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVS-SGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVF---TGTTELEFFDSQGTRWSGNTLPDFGVCVDNISSDEGIDVPESTFVGSDGLPLDC 1637 G+ Y GC T+TDIY +G + GP+F LD +VV GSP T WLL ++++ GS+ G GGD LRIQS G D+YE+RGHGGS+ F DT VTSWDT+ K Y+ RS++ CVSE+L +TC G A N MGECRMDII SE+G +G+ AESYG++WKVRG+C + N +VF++T V G+I+ SDI+ YYG YS+GH GG+WT NKMH N QYGFDPHDDSD+L IA N V+ N NHGIIASKRCN+V+I+ N V DGG AVGIFLHRSSD V GNT+ +MKDAG+A++ESM A I+DN +YGIR+S+G+A N V +NSF C YG++TYQG+D P G +NTF +N++ GGVK++ ++ ++ ++N F + E F D + W+ N +PD +C + D+ ID +S D LP C Sbjct: 398 GKNYIRGGGCATLTDIYTAQGGHND------DGPLFVLDSNDNVVG-----GSP-TGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD-DIC---LKGDKNIDYMKSY----DSLPDLC 845
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 1.450e-125 Identity = 225/449 (50.11%), Postives = 289/449 (64.37%), Query Frame = 3 Query: 252 YAESPGCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEG-GRSYLNCVSEKLTGET--CVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCK---DLS---NHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAG---GVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVD 1562 Y E GC T+T +Y + GP++ LD+ VV G T WLL L + +GS GT GD D LR+ S D+ EVRG+GG+++F+ T VTSWDT+ + E++G GRS++NCV++ C G++ + GECRMDII S +G +GW +AESYGLTWKVRG C+ D NH++F+ NVYG+IL S+I+ YYG YSYGHQGGVW +N M N QYGFDPHDDSD L I+ N VY N NHGIIASKRCN+V+I++NEV DGG DAVGIFLHRSSD A VH N + NM+DAG+A++ES DA+IYDN +YGIR+SLGS N + +N F+ YGL+TY GSD P S+GRPS+N FD N+I +T G GV +K D+ + +NVFTG + EF DS T W NT G C+D Sbjct: 192 YFEGGGCGTLTQMYEAQ---------EGDGPLYVLDENNDVV------GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSD-DFIEVRGYGGNLHFQSTTVTSWDTD-NGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTI-ETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNTG---GGCLD 619
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 373 bits (957), Expect = 4.470e-116 Identity = 219/461 (47.51%), Postives = 277/461 (60.09%), Query Frame = 3 Query: 246 RLYAESP------GCFTMTDIYNWRGTVSSGGIVSSKGPIFQLD-DTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGE--TCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVF-TGTTE---LEFFDSQGTRWSGNTLPDFGVCVDNISSDEGID 1589 RLY ES GC T+ I+ R + K P++ +D D+G V E T WLL ELY+ +G GT GGD DELR+ S T + +R HGGS+ F T V SWDT +P E+ GRSY++ VSE +T E TC G AKN MGE RMDI +SEIGYLG+ ++ESYGLTWKVRGFCKD SN ++FD NVYGN+ SDIHH +G+Y+YGHQ G W NKMH N YGFDPHDDSD L I N+VYNN HGIIASKRCN V I NEV G + GIFLHRSSD A+V GN + + DAG+A+LES +AD+ +N + +YG+RMS+G A N +N + Y +TY GSD P + VSSGR NN F NS + +K+K +D +NVF G + + F D+ + GNT D G +++D D Sbjct: 59 RLYLESADGETRGGCATLGQIWESR---------AGKAPLYAVDPDSGDVSETE-------TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEP-DVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFD 501
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 379 bits (974), Expect = 1.350e-114 Identity = 211/459 (45.97%), Postives = 279/459 (60.78%), Query Frame = 3 Query: 192 GTIPTFRYSNSSGQVGMGRLYAESPGCFTMTDIYNWRGTVSSGGIVSSKGPIFQLDDTGSVVENPGPIGSPVTNKWLLAAELYMTNGSIFYCKGTTTGGDCDELRIQSNGPTDWYEVRGHGGSMYFEDTIVTSWDTELKAPQEEYEGGRSYLNCVSEKLTGE--TCVGKAKNDMGECRMDIIDSEIGYLGWLNAESYGLTWKVRGFCKDLSNHDVFDKTNVYGNILRSDIHHNYYGMYSYGHQGGVWTNNKMHHNHQYGFDPHDDSDHLIIARNKVYNNFNHGIIASKRCNDVQIYDNEVSDGGPDAVGIFLHRSSDKALVHGNTITNMKDAGIALLESMDADIYDNVIDGAQYGIRMSLGSAGNNVYDNSFNACFGYGLFTYQGSDAPTEGVSSGRPSNNTFDSNSITDTAGGVKLKLSDNLIVSNNVFTGTTELEFFDSQGTRWSGNTLPDFGVCVD 1562 GTI + S+ S G GC T+TD+YN + S GP++ LD + ++V G SP T WLL + L + +G Y GT+ GGD D LRIQS D++E+RG GGS+ F +T VTSWDT+ + EYEGGRS++NCV++ + +C G++ + GECRMDIIDS +G +GW +AESYGLTWKVRG C DLSN ++ D NVYG+I S+I+ YYGMYSYGHQGGVWT+N M N YGFDPHDDSD L IA N VY N NHGIIASKRCN+V+IY AL+ES A+IYDN I+ +YGIR+SLGSA N+++DN+F++ YGL+TY+GSD P + GR +N+FD+N+I++T +K+K D+ +NNVF EF DS T W+ N + G C+D Sbjct: 396 GTIASISTSSDSSSFSGG-------GCATLTDMYNTQ---------SGSGPLYVLDSSNNIVSGGGGSASP-TGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIG--GGCLD 832 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7192.16029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7192.16029.1 >prot_L-elsbetiae_contig7192.16029.1 ID=prot_L-elsbetiae_contig7192.16029.1|Name=mRNA_L-elsbetiae_contig7192.16029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp MATTSPTSSIPSASSSAMFMTASPTPTPPTTPSIPSASPTPVMTIPSSCAback to top mRNA from alignment at L-elsbetiae_contig7192:4040..7714+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7192.16029.1 ID=mRNA_L-elsbetiae_contig7192.16029.1|Name=mRNA_L-elsbetiae_contig7192.16029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3675bp|location=Sequence derived from alignment at L-elsbetiae_contig7192:4040..7714+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7192:4040..7714+ >mRNA_L-elsbetiae_contig7192.16029.1 ID=mRNA_L-elsbetiae_contig7192.16029.1|Name=mRNA_L-elsbetiae_contig7192.16029.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3204bp|location=Sequence derived from alignment at L-elsbetiae_contig7192:4040..7714+ (Laminarionema elsbetiae ELsaHSoW15)back to top |