mRNA_L-elsbetiae_contig7160.15991.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7160.15991.1
Unique NamemRNA_L-elsbetiae_contig7160.15991.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7160.15991.1 vs. uniprot
Match: A0A6H5KM27_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM27_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 6.270e-126
Identity = 266/386 (68.91%), Postives = 286/386 (74.09%), Query Frame = 1 
Query:   22 MVPAVMEACPELFCPEQRGPAVVTTXXXXXXXTEVHTRAILHLKSA--------TLQLLDRGFVRRAMGAVVAAPGAAADVLRALLGCPVGVLLSEGEEALRAVLPKVAGSDFPRRSSVASLCCKVWTRLYAEHPAGGRQAMETWTLNALLQADSEAPLPRAVAYETMCREPVLVFRCRGEALSCPYLLEILLRVLRSLLLASDRTIDQAVTAKNSRWEMVSASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEDTEEGSATVNGQMMSLVQQAIVARCLLVVALEGADGVSRGGAKDKGGGEQEEGEESDGAAAALGEGLATRAQCSKLVCGFLQTLFSECPPLLHLLLRQTLPDAAFALLLDGVSARR 1155
            M+PAVM+ CPELFCPEQRG     +         V   A++   S         T   LD+ FVRRA GAVVAAPG A DVLRALL CPV  LLS  E+ L+ VLPK+AG DFPRRSSVASLCC VW RLY  HP G  QAMETWTLNALLQ D+EAPLPRAV YE MCREPVLVFRCRGEALSCPYLL ILLRVLRSLLLAS+RTIDQAV AKN R E          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WED EEG+A+V+G+MMSLVQQAIVARCLLVVAL GA G+S GG+           EE +G     G+G+ATRAQC KLVC FLQTL SECPPLLHLLLRQTLP  A  LLLDGV A R
Sbjct:    1 MLPAVMDVCPELFCPEQRG----DSCDGNDYGDVVDATAVVEPPSGKFASGQEITPHPLDKAFVRRATGAVVAAPGGAVDVLRALLACPVPALLSTAEDVLKGVLPKIAGPDFPRRSSVASLCCDVWMRLYDAHPHG--QAMETWTLNALLQTDAEAPLPRAVTYEIMCREPVLVFRCRGEALSCPYLLRILLRVLRSLLLASERTIDQAVVAKNVR-EKGGEGNDKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWEDVEEGTASVDGRMMSLVQQAIVARCLLVVALGGA-GLSAGGSAK---------EEREGGVVVFGDGIATRAQCRKLVCEFLQTLISECPPLLHLLLRQTLPTEALKLLLDGVPASR 369
[Close]
BLAST of mRNA_L-elsbetiae_contig7160.15991.1 vs. uniprot
Match: D7FZF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF5_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.030e-83
Identity = 224/393 (57.00%), Postives = 241/393 (61.32%), Query Frame = 1 
Query:    1 LASLHAFMVPAVMEACPELFCPEQRGPAVVTTXXXXXXX----TEVHTRAILHLKSATLQLLDRGFVRRAMGAVVAAPGAAADVLRALLGCPVGVLLSEGEEALRAVLPKVAGSDFPRRSSVASLCCKVWTRLYAEHPAGGRQAMETWTLNALLQADSEAPLPRAVAYETMCREPVLVFRCRGEALSCPYLLEILLRVLRSLLLASDRTIDQAVTAKNSRWEMVSASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----WEDTEEGSATVNGQMMSLVQQAIVARCLLVVALEGADGVSRGGAKDKGGGEQEEGEESDGAAAALGEGLATRAQCSKLVCGFLQTLFSECPPLLHLLLRQTLPDAAFALLLDGVSARR 1155
            LASLHAFM+PAVM+ CPELFCPEQRG +                E  + + +  +  T   LD+ FVRRA GAVVAAPG A DVLRALL CPV  LLS  E+ L+ VLPKVAG DFPRRSSVASLCC VW RLY  HP G  QAMETWTLNALLQ D+EAPLPRAV YETMCREPVLVFRCRGEA                            V AKNSRWEMV ASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    WED EEG+ATV+G+MMSLVQQAIVARC                               +G     G+G+ATRAQ                          TLP  AF LLLDGV A R
Sbjct:   30 LASLHAFMLPAVMDVCPELFCPEQRGNSCDDNHYGDAVDGTAVVEAPSGSFVSGQEITPHPLDKAFVRRATGAVVAAPGGAVDVLRALLACPVPALLSTAEDVLKGVLPKVAGPDFPRRSSVASLCCNVWMRLYDAHPHG--QAMETWTLNALLQTDAEAPLPRAVTYETMCREPVLVFRCRGEA----------------------------VLAKNSRWEMVCASARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWEDVEEGTATVDGRMMSLVQQAIVARCXXXXXXXXXXXXXXXXXXXX----------XEGGVVVFGDGIATRAQ--------------------------TLPTEAFKLLLDGVPASR 356
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7160.15991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KM27_9PHAE6.270e-12668.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FZF5_ECTSI1.030e-8357.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7160contigL-elsbetiae_contig7160:3639..9002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIntegrator complex subunit 2
Ec32 orthologEc-19_003130.1
Exons8
Model size1173
Cds size1152
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816795.9506369-UTR-L-elsbetiae_contig7160:3638..36591622816795.9506369-UTR-L-elsbetiae_contig7160:3638..3659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7160 3639..3659 +
1691683819.7767112-UTR-L-elsbetiae_contig7160:3638..36591691683819.7767112-UTR-L-elsbetiae_contig7160:3638..3659Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7160 3639..3659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816795.9625947-CDS-L-elsbetiae_contig7160:3659..38031622816795.9625947-CDS-L-elsbetiae_contig7160:3659..3803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 3660..3803 +
1691683819.7888756-CDS-L-elsbetiae_contig7160:3659..38031691683819.7888756-CDS-L-elsbetiae_contig7160:3659..3803Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 3660..3803 +
1622816795.9724333-CDS-L-elsbetiae_contig7160:4005..41581622816795.9724333-CDS-L-elsbetiae_contig7160:4005..4158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 4006..4158 +
1691683819.7994292-CDS-L-elsbetiae_contig7160:4005..41581691683819.7994292-CDS-L-elsbetiae_contig7160:4005..4158Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 4006..4158 +
1622816795.9844153-CDS-L-elsbetiae_contig7160:4760..49211622816795.9844153-CDS-L-elsbetiae_contig7160:4760..4921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 4761..4921 +
1691683819.80816-CDS-L-elsbetiae_contig7160:4760..49211691683819.80816-CDS-L-elsbetiae_contig7160:4760..4921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 4761..4921 +
1622816795.9960139-CDS-L-elsbetiae_contig7160:5724..57851622816795.9960139-CDS-L-elsbetiae_contig7160:5724..5785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 5725..5785 +
1691683819.817532-CDS-L-elsbetiae_contig7160:5724..57851691683819.817532-CDS-L-elsbetiae_contig7160:5724..5785Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 5725..5785 +
1622816796.0086567-CDS-L-elsbetiae_contig7160:6543..66451622816796.0086567-CDS-L-elsbetiae_contig7160:6543..6645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 6544..6645 +
1691683819.8266394-CDS-L-elsbetiae_contig7160:6543..66451691683819.8266394-CDS-L-elsbetiae_contig7160:6543..6645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 6544..6645 +
1622816796.0245595-CDS-L-elsbetiae_contig7160:7591..77871622816796.0245595-CDS-L-elsbetiae_contig7160:7591..7787Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 7592..7787 +
1691683819.8361313-CDS-L-elsbetiae_contig7160:7591..77871691683819.8361313-CDS-L-elsbetiae_contig7160:7591..7787Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 7592..7787 +
1622816796.0368636-CDS-L-elsbetiae_contig7160:8276..84611622816796.0368636-CDS-L-elsbetiae_contig7160:8276..8461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 8277..8461 +
1691683819.8459988-CDS-L-elsbetiae_contig7160:8276..84611691683819.8459988-CDS-L-elsbetiae_contig7160:8276..8461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 8277..8461 +
1622816796.0488865-CDS-L-elsbetiae_contig7160:8852..90021622816796.0488865-CDS-L-elsbetiae_contig7160:8852..9002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 8853..9002 +
1691683819.855592-CDS-L-elsbetiae_contig7160:8852..90021691683819.855592-CDS-L-elsbetiae_contig7160:8852..9002Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7160 8853..9002 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7160.15991.1prot_L-elsbetiae_contig7160.15991.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7160 3660..9002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7160.15991.1

>prot_L-elsbetiae_contig7160.15991.1 ID=prot_L-elsbetiae_contig7160.15991.1|Name=mRNA_L-elsbetiae_contig7160.15991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=384bp
MVPAVMEACPELFCPEQRGPAVVTTTITTTTTTEVHTRAILHLKSATLQL
LDRGFVRRAMGAVVAAPGAAADVLRALLGCPVGVLLSEGEEALRAVLPKV
AGSDFPRRSSVASLCCKVWTRLYAEHPAGGRQAMETWTLNALLQADSEAP
LPRAVAYETMCREPVLVFRCRGEALSCPYLLEILLRVLRSLLLASDRTID
QAVTAKNSRWEMVSASARRRNDKAAAEAAVAAAAAAAAAAASAAASGGPP
PPPPPPPPPAWEDTEEGSATVNGQMMSLVQQAIVARCLLVVALEGADGVS
RGGAKDKGGGEQEEGEESDGAAAALGEGLATRAQCSKLVCGFLQTLFSEC
PPLLHLLLRQTLPDAAFALLLDGVSARRRILAL*
back to top

mRNA from alignment at L-elsbetiae_contig7160:3639..9002+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7160.15991.1 ID=mRNA_L-elsbetiae_contig7160.15991.1|Name=mRNA_L-elsbetiae_contig7160.15991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5364bp|location=Sequence derived from alignment at L-elsbetiae_contig7160:3639..9002+ (Laminarionema elsbetiae ELsaHSoW15)
CTCGCAAGCTTGCACGCCTTCATGGTGCCGGCCGTTATGGAAGCGTGCCC
GGAGCTCTTCTGCCCCGAGCAAAGGGGGCCCGCCGTCGTCACCACCACCA
TCACCACCACCACCACCACCGAGGTACACACACGCGCAATCTTACACCTA
AAAAGCGCCACGCTTGTGCATGAACACAAACAAAACAGACTACTTGAAGC
CTTTTGCTCTCGTTTCTAGTGGTGCATACGCAGTACCATACATACAATGC
ACGCAAGCCTTTCCCCCCCGCGCGCGCTCCACCCTTAAATGACCCCCCCC
TCCCCCCGCCGCGCCGCCCCCGCCGCCCCCCGCTTGCGCCAAATCGGAAT
CGGAGTAGCCTCGGCAGCAGCTGCTGGACCGCGGGTTTGTTCGGCGGGCG
ATGGGGGCGGTGGTGGCGGCCCCAGGTGCCGCGGCGGACGTCCTCAGGGC
GCTCCTGGGGTGCCCGGTGGGGGTGCTGCTGTCCGAGGGGGAGGAAGCGC
TGAGGGCGGTGCTGCCCAAGGTGTTTATTTTGGGTTGTGCTTCCCCTTGC
CCTTGCCCTTCCCCTTGCCCTTGCCCTTGATGCTGGTGTTGGTTTGTCTG
TTTGTTTGTTATTCCTCTTTTTTTTTTTTGGGGGGGTGCCTTATCTTTTT
GGTTGATTGATTTACTGTGTTTGTGTGCTTGTTTTGGGAAGGGGGGTCGG
CAATGATGTCGTTCGCTCGTTCTTGTTTGTTTTGTTTTGTTTTGTTTTGT
TTGTTTGATTTTCTTGGTGCGAGTGCGACTGCAGGCTGTTTTTTTTTCTG
GTTTACTTGAACGCTTTCTGCGACAGCGATACCACGTGTCTGTCGGCCGC
AGAAAACGGTCGTTTACCATTCGGTCTCTTTTTAAGAGCTCCTTTCGCGG
TCAACTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCATTCACTCTATTTCTTATTCTCTCTCTCTCTCTCCC
TCTCTCTCTTTCTCCCCCTCTCCCCCTCTCCCCCTATGCCTCTCTACTTC
TCATGGGCCATCGTTAACCGTCTCACGTACGTCGCACTCTCCGCCCCTTC
CCCAACCGCGCCGTGTGCCCAGGTGGCCGGCTCGGACTTCCCCCGGCGGT
CTAGCGTGGCGTCCCTCTGCTGCAAGGTGTGGACGCGGCTATACGCCGAG
CACCCCGCCGGCGGGCGGCAGGCCATGGAGACGTGGACCCTGAACGCCTT
ACTGCAGGCCGACTCGGAGGCACCTCTACCCAGGTGACGGTGATGGTGAT
GGTGATAGTGATGGTGATGGTGGTGGCGGCGGTGGTGTTGATGGTGGTGG
TGTTGATGGTGATGGCGGTGGTGGCAGTGGCGGTGGCGGTGGTGGCGGTG
ATGGTGATGGTGATGGTGATGGTGATGGTAATGGTGGTGGGGGTGGTGAT
GGTGATGGTGATGGTGGTGGCGGCGGTGGTGTTGATGGTGGTGGCGGTGG
TGGCGGTGGCGGTGGTAGTGGTGGGAGCTGATTGTGATTACGGTGGGGAC
GATGGAGTGGGCGGCGGTGGGCGGCGGTGGGGATGATGTATAGTGATTGT
GGTGGTGGCGGTGGTGGTGGTGGGGAACTGATGGTGGCAATGGTGACGAT
GGTGACGACAATGGAAGGGACGGCGGTGGGCGGCGGCGGGGGTGACGTGA
TGACTGAGGTGTCTGGGTGTTTGCTCCGCCGGGGCGGCACTCGTGCAGCT
TCTTCGCTCTTTTGGTGGCCGTCGCGATGAGCCGGTTCTGCATTGGATGG
GGTCAGCGAGTCGGAGTATGAGACGAATCATCGGTGCAGCAGTGCGGAGG
AGCTTGTTGGTCCACCCTCTTTCCTCCTCCCTCGCTCTGTTCTGTCTCCA
CTGCCCCATCCCGACTCTTTTGTCTCCATTCGTCTTAAGTGACCCCTTGC
TCCTCCTCTTCTGGTCTCTGTTGCTGCCTCTCTCCGCCACTTTTGGGCCT
GCCTTTCCCGCGTCGGTCTTCTGCATGTCGTGGCGATTGGCGTCGCTCAC
GGGCTGCCGTTGCTCCGAACACCGGGCACCCCGTAGGGCCGTGGCCTACG
AGACCATGTGCCGAGAGCCGGTGCTGGTGTTCCGCTGTAGGGGAGAGGTA
AGCATGCGTACGACGTACATACGTAAATGGATAAACTTCACTTCGCCGGC
CAGAACTGTTTTTTTTTTTCTTTTATGGTGCTGCCGCGCGGAGGATGTTT
TTTCAGACGTTGCGAAGGCCCGCGAACACAGCAAACACTAAGCCGGTGCG
TGCTGCCGGCTTGAGAATGCATGTGTATGTCTGTCAAGCCTCGTCTCGTC
TGCCCTCCCAGGCCTGCCTTGCCTGCCCCCCCCCCAACCCCCCGCTGCAC
TCATCGTAGGCTTCAGCGCGTTCGTAATGCGACGCTTCGAGCACCATAAT
GTCGCGGCGGTTCGCGCTTGGTGCTTTATTGCTGTGTGTCTCCGAGCCGA
GCCGACTATTCCGGCAGAAGAAACAAACCGGCGCGTGCAGCGTCCCATCT
TTGTTGGTGGCGAGAGGTCTGCCTTTTTAGTCGAGTGGCTACGTACGGCA
CGCGTGATCGATCGAGCATTCATACGTTAGATAACCCCCCCCCCCAGATC
CTTGGGAGTCCCGAGAGTGGCTGGCTGGTCTTGGTCTTGGTCTTGCGCTC
GTTCGTCCGTGTCTTTGGTGTCGACCGTCATCATCCCTTGGCTTTCCCTG
TTGCTGGTCACGTCGCTTTCTGTCGCCATGTCTTTCTGTCCCGCCTCAAC
TGCTTCTCTCTTGTTTCTTGTTTTTGCTGTCTCCCTCCCTCTCTCTCTCT
CTCGCTGCCTCCCCCCCTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCATC
TCCAGGCGCTGTCCTGCCCGTACCTGCTCGAAATCCTGCTGAGGGTGCTC
CGGTCCCTGCTGCTTGCCTCGGACCGGACGATCGACCAGGCCGTCACGGC
GAAGAACGTAAGTGAACAGATTCATTTCCCTTTGTTCTGTGTGGTTGGTG
GTTTTGATGCTTAAATAGGAGGGAGAGTGTGAGGGGCAGGAACAGCGTGA
CGAAATAAAAGGAGACCGTGAAGCATATATGTGTATGTATGTTGTCGGGA
GTGTTGGCTGGCTGTATGTATGTTTGTCTACGCGACGCAGATTCGATTTT
ACACGATTTGACGCGGTTTGGCACCACGGTTGACAAGATTTTCACGGCCC
AATAGCGCGTTGTTTTCGCGTATTTTATCATACCGGAGGTGACACATGAT
ACCACCATCCCCCCTGGACCGACGTTTAGAGGTCCATTACTCCGTAACGA
AGAGGGTGCCAGCACCAAACGACGCATTTTCGGAGAGCCCTCGACTAGAC
CTTTCCAACTCCACCCCCTTTCGGCACTGGCAGGCTTCTTGCTGGGGAGG
AATCGACCTTTGAAAATCTGTCCAAGGAGGGGTGGTATCTTGGGTCGCCT
ACGGTATTATATATAGCGCATTGAACTTTTGGCCGAATTAGCGAAACAAA
TGACGACGGCAGCAAGAAGCCACGGCCGACCACATTTGTGCGAGGCGCAC
GTGTGTCCCCCAAATGCAATACAGAACTGCGTTCCAGCTTTCTAAAAACG
CCGCCTTTGGGCATGATCTTCTGTGGAGTCTCCGGAAAGTCTGTAGATTT
TAATTATTGTATACAAATGTCAGCAGTCTACGTCCTTTCTGAGAAAAAAG
TGGCTTTTGTGGCGTTTCGCTTCCCTGGGGGCCCGGTTTCTTGATGGCTT
TCGGTTGGGTTTACCGCAATCTAAGCGCAAATCACATGCCGCCGTACGCC
TCTCGAGAGTTTGAGGCTTACCTACCGTACACGCGGCCCATTCCACATCA
TCATCACCCCCACCCCCACCCCCACGACATCCGGCTCTCCACCCGCGATG
CAGAGCCGCTGGGAGATGGTGTCCGCGTCCGCACGCCGAAGAAACGACAA
GGCGGCCGCCGAGGCCGCCGTGGCGGCGGCAGCGGCGGCGGCGGCGGCCG
CGGCAAGCGCGGCCGCTTCGGGAGGCCCGCCGCCCCCGCCCCCGCCGCCC
CCGCCGCCGGCCTGGGAAGACACCGAGGAAGGCTCCGCGACCGTCAACGG
TAAGAGGGAGAAGTGAGCAGAAAATAGGCTAAATAGAGTATCATACATGG
GATTTAAAGGTCCAGGGTTAGCGCCTAAATTGCAATGTGTCTCGGTCCCG
GGCAGGATCAACCGGAGCAATTAGTGCACATGCCGCCCGACCCCGCCAAA
GCCTTCGCCGCGCTTGTTGTTGCTCTGGACGCGACCGCCGAGCCGCTTAT
CGCGTGCCCGGCTGTCGNNNNNNNNNNAAGGGCCAGGGTTAGCGTCCTAA
ATTTAATTTTTCCCGCGCCCGGGCCGGACCAACCCGCCCAAATGTTTTCC
ATGCCCCCCCCCCCCCCCCCCGCCCCCGGCTGTGCTTAGTTCTCTTTGGT
TCGGTGACGTCCCCGAAAGTCGTTCTATGGTTGTGTATGATGTGGGGATG
TCGAGGATATTTTTGATCGGATGACGGCGTGCGGCCCTGAGTAGAACCCC
CCTCCCCGCTTCCGCCCCTGCCCTCGCGTCGTTCATAGGCCAAATGATGT
CTCTGGTACAGCAGGCTATCGTCGCGAGGTGCCTCCTGGTGGTCGCCCTA
GAAGGGGCAGACGGGGTGTCCCGAGGGGGGGCCAAGGATAAGGGAGGCGG
GGAGCAGGAGGAGGGAGAGGAGAGTGACGGTGCCGCTGCCGCCTTGGGCG
AGGGCCTTGCGACCAGGGCGCAGGTGCGTTCGTCTCGTCCGGTGTAGAGT
TGGCCCGAGGCGATTGCGCGCGCGCGTGCGCGTGTGTGTGTGTGGGGGTG
ACGCGGAGGGTGGTGTGGAGGGTGGCGGGGGTGACGTGAAGAGTGGCGTG
GGGGGCGACTGCAGGCGGCTGGCACACTTTTTTTGTTTCTGGAGGGGGTT
CGTGTGAAGGAGTAAGTAAAGGAGGGTTATCTAGGTGCTGCTTGTGTGGT
TGTCGTTTTGTGCTGCTTCTCGACCAAAATATGTTCTTGTTCCCTCCCGG
GGTTTCCTTCTCATCTGCTTTTTGCCGCTGCGCGCGGCGTTGTTTTGACT
GCTGCGGCTGCTGCTTCTACCTCTGTTGCTGCTGCTGCTGCTGCTACTGC
TTTCACGAGCGTAGTGCTCCAAGCTGGTGTGCGGTTTCCTGCAGACCCTG
TTTTCGGAATGCCCGCCCCTGCTGCACCTTCTGCTGCGACAAACGCTCCC
GGACGCGGCCTTTGCGCTCCTGCTTGACGGGGTGAGTGCTCGCCGTAGAA
TATTGGCGCTATAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7160:3639..9002+

>mRNA_L-elsbetiae_contig7160.15991.1 ID=mRNA_L-elsbetiae_contig7160.15991.1|Name=mRNA_L-elsbetiae_contig7160.15991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2304bp|location=Sequence derived from alignment at L-elsbetiae_contig7160:3639..9002+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGCCGGCCGTTATGGAAGCGTGCCCGGAGCTCTTCTGCCCCGAGCA
AAGGGGGCCCGCCGTCGTCACCACCACCATCACCACCACCACCACCACCG
AGGTACACACACGCGCAATCTTACACCTAAAAAGCGCCACGCTTATGGTG
CCGGCCGTTATGGAAGCGTGCCCGGAGCTCTTCTGCCCCGAGCAAAGGGG
GCCCGCCGTCGTCACCACCACCATCACCACCACCACCACCACCGAGGTAC
ACACACGCGCAATCTTACACCTAAAAAGCGCCACGCTTCAGCTGCTGGAC
CGCGGGTTTGTTCGGCGGGCGATGGGGGCGGTGGTGGCGGCCCCAGGTGC
CGCGGCGGACGTCCTCAGGGCGCTCCTGGGGTGCCCGGTGGGGGTGCTGC
TGTCCGAGGGGGAGGAAGCGCTGAGGGCGGTGCTGCCCAAGCAGCTGCTG
GACCGCGGGTTTGTTCGGCGGGCGATGGGGGCGGTGGTGGCGGCCCCAGG
TGCCGCGGCGGACGTCCTCAGGGCGCTCCTGGGGTGCCCGGTGGGGGTGC
TGCTGTCCGAGGGGGAGGAAGCGCTGAGGGCGGTGCTGCCCAAGGTGGCC
GGCTCGGACTTCCCCCGGCGGTCTAGCGTGGCGTCCCTCTGCTGCAAGGT
GTGGACGCGGCTATACGCCGAGCACCCCGCCGGCGGGCGGCAGGCCATGG
AGACGTGGACCCTGAACGCCTTACTGCAGGCCGACTCGGAGGCACCTCTA
CCCAGGTGGCCGGCTCGGACTTCCCCCGGCGGTCTAGCGTGGCGTCCCTC
TGCTGCAAGGTGTGGACGCGGCTATACGCCGAGCACCCCGCCGGCGGGCG
GCAGGCCATGGAGACGTGGACCCTGAACGCCTTACTGCAGGCCGACTCGG
AGGCACCTCTACCCAGGGCCGTGGCCTACGAGACCATGTGCCGAGAGCCG
GTGCTGGTGTTCCGCTGTAGGGGAGAGGGCCGTGGCCTACGAGACCATGT
GCCGAGAGCCGGTGCTGGTGTTCCGCTGTAGGGGAGAGGCGCTGTCCTGC
CCGTACCTGCTCGAAATCCTGCTGAGGGTGCTCCGGTCCCTGCTGCTTGC
CTCGGACCGGACGATCGACCAGGCCGTCACGGCGAAGAACGCGCTGTCCT
GCCCGTACCTGCTCGAAATCCTGCTGAGGGTGCTCCGGTCCCTGCTGCTT
GCCTCGGACCGGACGATCGACCAGGCCGTCACGGCGAAGAACAGCCGCTG
GGAGATGGTGTCCGCGTCCGCACGCCGAAGAAACGACAAGGCGGCCGCCG
AGGCCGCCGTGGCGGCGGCAGCGGCGGCGGCGGCGGCCGCGGCAAGCGCG
GCCGCTTCGGGAGGCCCGCCGCCCCCGCCCCCGCCGCCCCCGCCGCCGGC
CTGGGAAGACACCGAGGAAGGCTCCGCGACCGTCAACGAGCCGCTGGGAG
ATGGTGTCCGCGTCCGCACGCCGAAGAAACGACAAGGCGGCCGCCGAGGC
CGCCGTGGCGGCGGCAGCGGCGGCGGCGGCGGCCGCGGCAAGCGCGGCCG
CTTCGGGAGGCCCGCCGCCCCCGCCCCCGCCGCCCCCGCCGCCGGCCTGG
GAAGACACCGAGGAAGGCTCCGCGACCGTCAACGGCCAAATGATGTCTCT
GGTACAGCAGGCTATCGTCGCGAGGTGCCTCCTGGTGGTCGCCCTAGAAG
GGGCAGACGGGGTGTCCCGAGGGGGGGCCAAGGATAAGGGAGGCGGGGAG
CAGGAGGAGGGAGAGGAGAGTGACGGTGCCGCTGCCGCCTTGGGCGAGGG
CCTTGCGACCAGGGCGCAGGCCAAATGATGTCTCTGGTACAGCAGGCTAT
CGTCGCGAGGTGCCTCCTGGTGGTCGCCCTAGAAGGGGCAGACGGGGTGT
CCCGAGGGGGGGCCAAGGATAAGGGAGGCGGGGAGCAGGAGGAGGGAGAG
GAGAGTGACGGTGCCGCTGCCGCCTTGGGCGAGGGCCTTGCGACCAGGGC
GCAGTGCTCCAAGCTGGTGTGCGGTTTCCTGCAGACCCTGTTTTCGGAAT
GCCCGCCCCTGCTGCACCTTCTGCTGCGACAAACGCTCCCGGACGCGGCC
TTTGCGCTCCTGCTTGACGGGGTGAGTGCTCGCCGTAGAATATTGGCGCT
ATAATGCTCCAAGCTGGTGTGCGGTTTCCTGCAGACCCTGTTTTCGGAAT
GCCCGCCCCTGCTGCACCTTCTGCTGCGACAAACGCTCCCGGACGCGGCC
TTTGCGCTCCTGCTTGACGGGGTGAGTGCTCGCCGTAGAATATTGGCGCT
ATAA
back to top