prot_L-elsbetiae_contig716.15990.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig716.15990.1
Unique Nameprot_L-elsbetiae_contig716.15990.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
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BLAST of mRNA_L-elsbetiae_contig716.15990.1 vs. uniprot
Match: D7FKP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKP8_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.780e-38
Identity = 87/159 (54.72%), Postives = 99/159 (62.26%), Query Frame = 0 
Query:    1 MGDGGGQTNNCC---LPRVVERESKPICGDAGQGSATSDGVEEKSNSETLRPPPGFTLESWKDPALSGEERRRRRFGSGVRNMAAIQRSCDARREMVAGGEPEPEEFLGRHGG-LVRPDRDRAPAHGPVQAAVPGDTAGG-PSVFSFGFDIGISFNGGS 154
            +GDGGG+  +     LP     +S P               E +     LRPPPGFTLESWKDPA++GEERRRRRFGSGVRNM AIQRSCDARR ++  GE   E+   R GG L RP  DRA   G V A  PG T GG  SVF+FGFDIGISF+GGS
Sbjct:  190 VGDGGGEATSSAVASLPAAXXXDSSPK-------------REHRQRPPGLRPPPGFTLESWKDPAITGEERRRRRFGSGVRNMVAIQRSCDARRGLIPDGEVGEEKLPERQGGGLGRPGCDRA--RGMVGAGAPGSTTGGGSSVFAFGFDIGISFDGGS 333
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BLAST of mRNA_L-elsbetiae_contig716.15990.1 vs. uniprot
Match: A0A836CBN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.240e-6
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:   51 PGFTLESWKDPALSGEERRRRRFGSGVRNMAAIQRSCDA 89
            PG +LESWKDP L+  ERR+ R+GSGVRN+AAIQR   A
Sbjct:  122 PGLSLESWKDPTLTEAERRKLRYGSGVRNIAAIQRRTKA 160
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig716.15990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKP8_ECTSI1.780e-3854.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBN0_9STRA1.240e-666.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig716contigL-elsbetiae_contig716:24860..25324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig716.15990.1mRNA_L-elsbetiae_contig716.15990.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig716 24446..25538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig716.15990.1 ID=prot_L-elsbetiae_contig716.15990.1|Name=mRNA_L-elsbetiae_contig716.15990.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
MGDGGGQTNNCCLPRVVERESKPICGDAGQGSATSDGVEEKSNSETLRPP
PGFTLESWKDPALSGEERRRRRFGSGVRNMAAIQRSCDARREMVAGGEPE
PEEFLGRHGGLVRPDRDRAPAHGPVQAAVPGDTAGGPSVFSFGFDIGISF
NGGS*
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