prot_L-elsbetiae_contig7157.15982.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig7157.15982.1
Unique Name	prot_L-elsbetiae_contig7157.15982.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	297

Homology

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BLAST of mRNA_L-elsbetiae_contig7157.15982.1 vs. uniprot
Match: D7FKK1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKK1_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 7.530e-89
Identity = 170/301 (56.48%), Postives = 208/301 (69.10%), Query Frame = 0

Query:    1 REKKKFTWDWHAWNLALVSTPSLLLAYYLHGVEKQMHEEAAIREEIQERTGVSSRGFLIPKREVREEVLGMLSAGNQHGSRSRGNDDKGEDGLG--RKLPADFEAIQRRLVAVESMLRVQGDANSEDTRVAGLGK------DSTSHDTSDPSQRSKVTRARNTAREEDSSQVAATGELSTMDKAIGIASAAGSWVVRAGERQGQRLLQLGQDWLAKDNRQEDSTLPEKSGLRKGGTAEHHAPGMVVAEVQRLEELPSRKASDRLGKSITSKTGEDTAAVVSDSSKEGAEGAWRRGELDGND 293
            REK+KFTWDWHAWNLA VSTPSL+LAYYLHGVEKQM E+AAIREEIQERTGVSSRGFLIPK+EVREEVLGMLSAGNQ G+ + G    GE  LG  R +PAD E+I+ RL  +E ML +QG ++S  T  AG+        DST   TS   Q  +V  ARN A + DSS  A   E+ST+D+AI   SAAGSW+++ GE QG+     G+ W+A+D RQED+T  EK G RK GT  H  PG   A+V+R E+L ++  ++R+  S    TGE++A V SDS K    GAWRRG+LD ND
Sbjct:   26 REKRKFTWDWHAWNLAFVSTPSLVLAYYLHGVEKQMLEDAAIREEIQERTGVSSRGFLIPKKEVREEVLGMLSAGNQPGN-AGGEGGAGEQQLGHERHVPADSESIEGRLATIERMLSMQGGSSSS-TPGAGIDNGSGPMTDSTLSGTSGSGQGKRVHSARNAASKADSSSGA---EVSTLDRAIETVSAAGSWLLQTGEAQGKXXXXXGRSWMAEDERQEDATPSEKPGSRKIGTG-HQEPGANHADVRRREDLAAKALAERVANSSAGSTGEESALVESDS-KGSHSGAWRRGKLDEND 319

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7157.15982.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7157.15982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FKK1_ECTSI	7.530e-89	56.48	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 30..296
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	TMHMM	TMhelix		coord: 13..32

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7157	contig	L-elsbetiae_contig7157:664..2898 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7157.15982.1	mRNA_L-elsbetiae_contig7157.15982.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig7157 664..2898 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig7157.15982.1 ID=prot_L-elsbetiae_contig7157.15982.1|Name=mRNA_L-elsbetiae_contig7157.15982.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp
REKKKFTWDWHAWNLALVSTPSLLLAYYLHGVEKQMHEEAAIREEIQERT
GVSSRGFLIPKREVREEVLGMLSAGNQHGSRSRGNDDKGEDGLGRKLPAD
FEAIQRRLVAVESMLRVQGDANSEDTRVAGLGKDSTSHDTSDPSQRSKVT
RARNTAREEDSSQVAATGELSTMDKAIGIASAAGSWVVRAGERQGQRLLQ
LGQDWLAKDNRQEDSTLPEKSGLRKGGTAEHHAPGMVVAEVQRLEELPSR
KASDRLGKSITSKTGEDTAAVVSDSSKEGAEGAWRRGELDGNDRQR*