mRNA_L-elsbetiae_contig7156.15981.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7156.15981.1
Unique NamemRNA_L-elsbetiae_contig7156.15981.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A6H5JNV2_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV2_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 5.210e-132
Identity = 250/485 (51.55%), Postives = 280/485 (57.73%), Query Frame = 1 
Query:    1 RRPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLLADRLREAATENAAGTPGAASTDIEVAATGXXXXXXXXXXXXXXXXXXXXXXXXXXSPLCDPASSAEQRNTYLRATGIERMKQELPRITRERPADWARLVEGLDPVTAYVVTTKWESAGGAADMPEFYAAVFGTGEE---------DAAGAPSXXXXXXXXXXXATGSDV-----------------------------------------------GVXXXXXXXXXXXXXXXXXXPGWADEAAAATTSALNTAGVGGDGVDVEAASPAATAQQ---------EKQNV-AGAGDVRSEEGVKGVALQERLVRLRKAFAKEQCAAVLKQATGW 1257
            R PSCV E+DLLQINLW+GAMETTTN+HYDAN+NLLFVLKGSKRVALLPP+M A V AMPVFSESANHS L+ AET  ++   EA RKGAVYADVAEGEA+FIPEGWWHQV SSRGTVA NVWFKGARPALCE PS  HMR Y+LRCLVESLLADRLREA   +       A+ DIEVA                             SPLC P S+ E+RN YLR  G +RMK+ELPR+  ERP DWARLV GLDP+TAYVVTT+WE+AGGA  MPEFYAA+FGTGEE         DA                 TG  V                                               GV                   G A  AAAA  + +NTA  GGDG   EA+  A   Q           +Q+V AGA    S+E V GVALQERLVRLR+AF +EQC  VL +A GW
Sbjct:  151 RTPSCVAEEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTADVDAMPVFSESANHSGLQPAETAILVHGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPSG-HMRNYHLRCLVESLLADRLREATAGDEDRRAIMAAADIEVATV-----TGDHVPKPAADTSAAAAVEREWSPLCGPTSTVEERNLYLRTMGTDRMKEELPRVAHERPQDWARLVSGLDPLTAYVVTTQWEAAGGAVGMPEFYAAIFGTGEEMAATGGGEEDARNRAEGATAAATAGATETGGTVQLAGSEGIGRTQQPATGAACDGAVVGAGGVGRFRVDGGGAGQASYGSGVASGGEAAGSVALLPGHVGAGEAAAAAAAAITTMNTAVWGGDGARCEASLQAQQQQLXXXXXXXXVSQQDVGAGAAGFASQE-VSGVALQERLVRLREAFVREQCGVVLNRAVGW 628
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: D8LLE0_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE0_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 1.970e-89
Identity = 153/235 (65.11%), Postives = 171/235 (72.77%), Query Frame = 1 
Query:    1 RRPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLLADRLREAATENAAGTPGAASTDIEVAATGXXXXXXXXXXXXXXXXXXXXXXXXXXSPLCDPASSAEQRNTYLRATGIERMKQ 705
            R PSCV ++DLLQINLW+GAMETTTN+HYDAN+NLLFVLKGSKRVALLPP+M AGV AMPVFSESANHS L+ AET AV++  EA RKGAVYADVAEGEA+FIPEGWWHQV SSRGTVA NVWFKGARPALCE PS +HMR YYLRCL+ESLLADRLREA   +       A+ DIEVA                             SPL  P S+ E+RN YLR  G + MK+
Sbjct:  151 RTPSCVSKEDLLQINLWMGAMETTTNLHYDANHNLLFVLKGSKRVALLPPDMTAGVHAMPVFSESANHSGLQPAETAAVVDGDEAARKGAVYADVAEGEAIFIPEGWWHQVFSSRGTVAVNVWFKGARPALCEGPS-KHMRNYYLRCLIESLLADRLREATAGDEDRRAIMAAADIEVATV-----TGDHAPKPAADTSAAAAVEREWSPLRSPTSTVEERNLYLRTIGTDSMKE 379
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A836CMX0_9STRA (Cupin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMX0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.370e-29
Identity = 64/133 (48.12%), Postives = 82/133 (61.65%), Query Frame = 1 
Query:    1 RRPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCE 399
            R P+ + E +LLQI LW G  ET+TN+HYD N+N+LFVL GSK V LLPP+    V+A P ++ + NHS L A                +    VA G ALFIPEGWWHQV S+  TVA NVW++G R A+ +
Sbjct:   27 RAPAFIDETELLQICLWAGPQETSTNLHYDCNHNVLFVLAGSKVVTLLPPSATPRVKAFPAYATTPNHSALSAHXXXXXXXXXXXXXXXSARVTVAAGAALFIPEGWWHQVESAPRTVAVNVWYEGVRAAIAK 159
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A067C9Y8_SAPPC (JmjC domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9Y8_SAPPC)

HSP 1 Score: 125 bits (313), Expect = 2.590e-28
Identity = 70/158 (44.30%), Postives = 91/158 (57.59%), Query Frame = 1 
Query:    7 PSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLLADRLREA 480
            P  + E  L Q+NLW+    + T +HYDA +N+L V++G+K V L  P    G  A PV S+SANH+RL   E DA        R       V   +ALFIPEGWWHQV+S   T+A N WF G RPAL + P   HM+ YY R L+E +LA   ++A
Sbjct:  113 PKAIAEMALTQVNLWMTLQASRTTLHYDAYDNVLTVVRGAKHVKLFAPTSDVG--AHPVTSKSANHARLTLDELDA--------RAPDATFTVTPTDALFIPEGWWHQVSSDPFTIAVNYWFDGLRPALVQHP---HMQPYYARVLLEDMLAHARKQA 257
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A662YBM9_9STRA (JmjC domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBM9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 9.990e-28
Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 1 
Query:    4 RPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGE-ALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLLADRL 471
            RP+C+ ++ + Q+NLW+ A    T++HYDA  N+L +L G K V L PP+ +  +   P++++SANHS++  A+ D V     A  +   +A  A G  ALFIPEGWWHQV S   T+A N W++G R  L   P   HM  YY R L+E L+  ++
Sbjct:  117 RPACLDDKPVSQVNLWMSAQPCRTSLHYDAYQNILVILYGRKTVTLYPPSESDKLYPYPIYTKSANHSQVNVAQPDHVAHPRFAEAQSQRFAVSAGGTYALFIPEGWWHQVDSDEFTIAVNYWWEGMRNQLTADP---HMTPYYSRILLEELVKQQI 270
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A1V9ZL82_9STRA (JmjC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZL82_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.790e-27
Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 1 
Query:    7 PSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLL 459
            P+ + +  + Q+NLW+    + T +HYDA +N+L V++G+K V L  P  A  V A PV+S+SANHS L+ A+ +A        R+      V    ALFIPEGWWHQV+S   T+A N WF G RPAL   P   HM+ YY R LVE L+
Sbjct:  121 PAAIAKVPMTQVNLWMTLAASATTLHYDAYDNILRVVRGTKYVRLFTPTSA--VAAHPVYSKSANHSLLQMADIEA--------REPTYSFTVTPNNALFIPEGWWHQVSSEPFTIAVNYWFDGLRPALVMHP---HMQPYYARVLVEDLI 258
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: W4GXF1_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXF1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.500e-26
Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 1 
Query:    4 RPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLL 459
            RP  +    L QINLW+    + T++HYDA  N+L VL+G+K V L PP+    +QA  ++S+S+NH+ L  A+T A+    E         DV    AL+IPEGWWHQV S   TVA N WF G RP L   P+   M  YY R LVE L+
Sbjct:  124 RPPILDNIQLTQINLWMTIASSDTSVHYDAYENVLHVLQGTKCVRLYPPSATPVIQAHAIYSKSSNHTTLSLAQTKALPHFIEF--------DVHANMALYIPEGWWHQVRSEPLTVAMNYWFDGMRPTLVAQPA---MVPYYARVLVEDLV 264
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BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: F0W3B7_9STRA (Uncharacterized protein AlNc14C12G1494 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3B7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.740e-26
Identity = 70/173 (40.46%), Postives = 97/173 (56.07%), Query Frame = 1 
Query:    7 PSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLLA-------DRLREAATENAAGT 504
            P  +  ++L QINLW+ A  + TN+HYDA  N+L VL G K V L PP+  A ++  P++SES+NHS++ + +    M+S      G V  +V  G A++IPEGWWHQV S   TVA N W+ G R  L + P S     +Y R L + LL         RLR A + +  GT
Sbjct:  136 PDLLNREELSQINLWMAAAPSETNIHYDAYQNILVVLAGKKVVTLYPPSEFAKLRPYPIYSESSNHSQVDSQKKKNFMDSNAGKASGMVL-NVEAGSAVYIPEGWWHQVKSDGFTVAINYWYNGLRQQLLDKPLSL---AFYSRILAQELLKKECDEYISRLRLARSSSITGT 304
[Close]
BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A6G0XBD0_9STRA (JmjC domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBD0_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.280e-26
Identity = 64/161 (39.75%), Postives = 92/161 (57.14%), Query Frame = 1 
Query:    4 RPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAV---------MESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLL 459
            +P C+   +L Q+NLW+    + T++HYDA  N+L VL G+K V L PP+  A ++  PV+S+SANH+ L  A++ A+            +E +   A Y  ++  EAL+IPEGWWHQV S   T+A N WF G R  L        M+ YY R L+E L+
Sbjct:  122 KPPCLDAIELTQVNLWMAVAPSETSLHYDAYENILHVLHGAKHVRLYPPSAVAAIEPHPVYSKSANHTTLSLADSKALPGFVDFTVAANRSEFVAGTAFYDLLSIVEALYIPEGWWHQVRSEAFTIAVNYWFNGMRAQLL---GDGDMQPYYARVLLEDLI 279
[Close]
BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Match: A0A024FZE7_9STRA (JmjC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZE7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.940e-26
Identity = 61/151 (40.40%), Postives = 87/151 (57.62%), Query Frame = 1 
Query:    7 PSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPPNMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEALFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVESLL 459
            P  +  + + QIN W+ A  + TN+HYDA  N+L VL G K V L PP+  A +   P++SES+NHS++++  T + M S    +   +   V  G A+FIPEGWWHQV S   T+A N W+ G R  L + P ++    YY R L + LL
Sbjct:   63 PDLLEREKVSQINFWMAAAPSQTNIHYDAYQNILVVLSGKKVVTLYPPSEYAKLHPYPIYSESSNHSQVKSHTTQSSMHSTFE-KADKMVLSVGAGSAVFIPEGWWHQVRSDSFTIAINYWYNGLRQQLLDNPLAQ---AYYSRILAQELL 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7156.15981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNV2_9PHAE5.210e-13251.55JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LLE0_ECTSI1.970e-8965.11JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CMX0_9STRA1.370e-2948.12Cupin-like domain-containing protein n=1 Tax=Tribo... [more]
A0A067C9Y8_SAPPC2.590e-2844.30JmjC domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A662YBM9_9STRA9.990e-2840.76JmjC domain-containing protein n=1 Tax=Nothophytop... [more]
A0A1V9ZL82_9STRA2.790e-2744.37JmjC domain-containing protein n=1 Tax=Achlya hypo... [more]
W4GXF1_9STRA1.500e-2644.08JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
F0W3B7_9STRA2.740e-2640.46Uncharacterized protein AlNc14C12G1494 n=1 Tax=Alb... [more]
A0A6G0XBD0_9STRA3.280e-2639.75JmjC domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A024FZE7_9STRA5.940e-2640.40JmjC domain-containing protein n=1 Tax=Albugo cand... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7156contigL-elsbetiae_contig7156:5665..10008 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.6
Seed ortholog evalue1.9e-74
Seed eggNOG ortholog2880.D8LLE0
KEGG koko:K10277
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
EggNOG OGsKOG2132@1,KOG2132@2759
EC1.14.11.27
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-27_002280.1
Exons6
Model size1260
Cds size1260
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7156.15981.1prot_L-elsbetiae_contig7156.15981.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7156 5665..10008 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816794.9931335-CDS-L-elsbetiae_contig7156:5664..62191622816794.9931335-CDS-L-elsbetiae_contig7156:5664..6219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 5665..6219 -
1691683819.0025725-CDS-L-elsbetiae_contig7156:5664..62191691683819.0025725-CDS-L-elsbetiae_contig7156:5664..6219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 5665..6219 -
1622816795.004051-CDS-L-elsbetiae_contig7156:7234..74311622816795.004051-CDS-L-elsbetiae_contig7156:7234..7431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 7235..7431 -
1691683819.0209148-CDS-L-elsbetiae_contig7156:7234..74311691683819.0209148-CDS-L-elsbetiae_contig7156:7234..7431Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 7235..7431 -
1622816795.0157714-CDS-L-elsbetiae_contig7156:7756..78891622816795.0157714-CDS-L-elsbetiae_contig7156:7756..7889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 7757..7889 -
1691683819.031571-CDS-L-elsbetiae_contig7156:7756..78891691683819.031571-CDS-L-elsbetiae_contig7156:7756..7889Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 7757..7889 -
1622816795.031378-CDS-L-elsbetiae_contig7156:8477..85571622816795.031378-CDS-L-elsbetiae_contig7156:8477..8557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 8478..8557 -
1691683819.0460846-CDS-L-elsbetiae_contig7156:8477..85571691683819.0460846-CDS-L-elsbetiae_contig7156:8477..8557Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 8478..8557 -
1622816795.045569-CDS-L-elsbetiae_contig7156:8980..90951622816795.045569-CDS-L-elsbetiae_contig7156:8980..9095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 8981..9095 -
1691683819.069682-CDS-L-elsbetiae_contig7156:8980..90951691683819.069682-CDS-L-elsbetiae_contig7156:8980..9095Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 8981..9095 -
1622816795.0575953-CDS-L-elsbetiae_contig7156:9828..100081622816795.0575953-CDS-L-elsbetiae_contig7156:9828..10008Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 9829..10008 -
1691683819.079546-CDS-L-elsbetiae_contig7156:9828..100081691683819.079546-CDS-L-elsbetiae_contig7156:9828..10008Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7156 9829..10008 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7156.15981.1

>prot_L-elsbetiae_contig7156.15981.1 ID=prot_L-elsbetiae_contig7156.15981.1|Name=mRNA_L-elsbetiae_contig7156.15981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=420bp
RRPSCVPEQDLLQINLWLGAMETTTNMHYDANNNLLFVLKGSKRVALLPP
NMAAGVQAMPVFSESANHSRLRAAETDAVMESAEALRKGAVYADVAEGEA
LFIPEGWWHQVTSSRGTVAANVWFKGARPALCEAPSSRHMREYYLRCLVE
SLLADRLREAATENAAGTPGAASTDIEVAATGGGDDDASRPPGSRDAATE
AAAVAAASSPLCDPASSAEQRNTYLRATGIERMKQELPRITRERPADWAR
LVEGLDPVTAYVVTTKWESAGGAADMPEFYAAVFGTGEEDAAGAPSAAAE
EGGGVVGATGSDVGVAGGVGGSSGGGAGGVLLLPGWADEAAAATTSALNT
AGVGGDGVDVEAASPAATAQQEKQNVAGAGDVRSEEGVKGVALQERLVRL
RKAFAKEQCAAVLKQATGW*
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mRNA from alignment at L-elsbetiae_contig7156:5665..10008-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7156.15981.1 ID=mRNA_L-elsbetiae_contig7156.15981.1|Name=mRNA_L-elsbetiae_contig7156.15981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4344bp|location=Sequence derived from alignment at L-elsbetiae_contig7156:5665..10008- (Laminarionema elsbetiae ELsaHSoW15)
CGCAGGCCCTCTTGTGTGCCAGAACAAGACCTCCTCCAGATCAACCTTTG
GTTAGGGGCGATGGAGACGACGACCAACATGCACTACGATGCCAACAACA
ACTTGCTGTTCGTGCTCAAGGGGAGCAAGCGGGTCGCCCTCCTGCCTCCG
AACATGGCTGCCGGGGTGCAAGCCATGCCGGTGAGAGAGCGCGCGGGGGC
GAGACAGAGACAAGCAGACCGCTCTCCCTTCGGAACCCCTTGTTTGGTGC
CCCTTCCCAAGTACCCTCTGCCCTGAAAATAGTTTCCTACCCGCACTAAT
CCCAGGGAATGCGGTCTGTTCATCCTGTATTCAAAGTTACATATCGATAC
ACTCTAGCTCCTAAAGTTATTTCACATGTCTACTCTTGTGTTTTAAAGTG
GTTGCGGTGGGGCTGAGCGTGTTCCTCGCAATGAATGGAGTAGACTGTTT
TTTCACGCACACGCGCCGCAGGTTCCCGGTGTTCGTTTGGAACACCCATC
CGCGCCATCAGCTGTCCGAAAAACATGGATGGTCTGGTGGCCGCAGCATC
ACTGCATTTCGCGCCCTGCTTTGTCCACGTCGCCTTGTATTTTTTGCAAA
GAGAACGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCACACCA
CCCCACCTCTCTTCCATTTCTTGAACGGCACCACCTCCACAGCGCGTACG
GTGCCGCCCCTCCTCCNNNNNNNNNNCACTCCTGCTTTCCGCCCCCTCTT
TTGTCCCCGCCCCCTTTTTTTTTTTGCAAAGAGAACCCCCCCCCCCCCCC
CCATCGACTCTGTTGCAGCAAAGACCCGTTCCTTGTTCACAATTTGATCG
CGATGCACGGTTTACCGTGGACGTGCTGTGCCTCCGTTCGGCATCTCGAT
TGGTTTTGTTCAGGTGTTTTCTGAATCGGCGAACCACTCCAGGCTCCGGG
CCGCCGAGACGGACGCGGTGATGGAAAGCGCCGAGGCCCTGCGAAAGGGC
GCCGTGTACGCCGACGTGGCCGAAGGGGGTAAGCACTGGATCCTCTCATG
TTTCCCCGTAGACCCCCAGGTCTTCAACCGGGCTAGCGCGGCCGGTCTTA
ACAACACAGGGCACACATTTTTGGACGTGCTTTGACTCGATTGGGCCTTT
TTGCAATGCTGTGCCGGTTTCTACCGGGCAGCTCGCGTGTGGCACACACC
ACCGTTCGCAGCTCCCGTGTACAGGGGGGAAGGGTGGGCGGGTTGATGTG
CATGCTGAACGACGTTGTTCGCCTGCCGTGCCCAGCAAAAGAGAAACGGC
GGTTTTTGAATCCCCCGTCTTCCTCGTTACCAGACAGCATACATATTCAC
GGTGCTCCCACGCCCTTTTTTGGTTGGTGCCCCACTCCCTTTTTTGGTTT
CCGGCCCTCTCGGGGTGTCTTGCCGTATCTGTCCTTCGTTGTACGGCTCA
GAGGCTCTCTTCATTCCAGAGGGCTGGTGGCACCAGGTCACGTCCTCGCG
TGGAACTGTGGCTGCCAACGTGTGGTTCAAGGTACACTCATCCTGTTTAG
ATAAAAAGTACATTAATTAAGCAAGAGATTTTATCGTTGCTGCTGCTGCT
GCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTCCTTCTAGCTGCTGCTGATATTATTGTTGCCTTT
TTTGTCTTCACGCCTGCGCTTTCTCTGCTATGTAGCCGGACTAGACCAAC
GAGACGGTCGGCCGGGATCGGGTCCACAACCGCTTTGGATTTTGTGTGCG
CGTGGTAGTTTGACACCGTTTTTGTGCGCGTGGCACGTCTGCGGCTTGGG
GATTGGATAAACGCATAGAGGAAGTTGTGTATGGAATGCCGATATATTGG
ATCCTGGCTTCGTTCAGACGGGATTTGTTGGCCGTGGCGGAGGTTGCTGG
CCGGGAAGCACCTAAAATGCCAGGAATGTTTTGGGCAATGAAGCGGCTCA
TTGATGACGCGCTGCACCACAAAGTAGCTTTTGGTTGCCCTATCTGTTGT
ACGGCGGCTTGCTGCCAAAATACACAATTTTTCTCTGTTCTTCATTTGGT
CTCCATTTTGGCTCTCCAGGGCGCACGCCCGGCGCTGTGCGAGGCTCCTT
CGTCTCGGCACATGCGGGAATACTACCTGAGGTGTCTGGTTGAGTCTCTG
CTCGCCGACCGGCTGCGCGAGGCCGCGACGGAGAACGCAGCAGGGACGCC
AGGTGAGAGCTCGGCACTACCAGTAATACCCCTGCTGCTGCTGCTGCTGC
TGCTGCTGTCGTTGGTGGTGGTGGTGGTGTGGCGGTGGCGGTTCCTGTTT
CATAGTCCCTGCCGCCGCGATAGCGCTCTCACCCGCCGAGGGTCGGGGAT
GTTAGGCCTCACTGAGACGGAGACCCTAGTGGGTGCTTGTGTGTACACCG
ATTAATAAGCGCACACCAACTTCCTTATCTTATAGTCCATGTCATGGTAT
GGTTCCATTGTCTCAAGGGTCCACGGCCTCACCCACCGTTTGGAACCGCC
AAACCAAACTACACTCAACGCTCACAGGGGCGGCCTCTACGGACATCGAA
GTGGCAGCAACGGGGGGTGGCGACGACGATGCCAGCAGACCACCAGGCTC
CCGCGACGCAGCAACAGAAGCTGCGGCGGTGGCGGCGGCGTCATCCCCGC
TCTGCGACCCAGCTTCCTCGGCTGAGCAGCGGAACACGTACCTCCGGGCC
ACCGGGATCGAGCGCATGAAGCAGGTTAGAGGGCAGAGTGGAGTAAAACC
TGCTGGATGCGTGCCAGCTTTGTCTGGGTGTGTACACGTTCTTCCCGTGA
TTGGCAATCCCCACAAGCACACCCCATGAGTACCTCGAAGGTATATCTCG
TTCGCCCACCCCGCTGGCGCGCCTTCCAGCGGGCTCAATCCGACGCATAG
AGTCACTAACGTCCGTTGTATCGGTTGCGTGTGGTGACATACACGATACG
CATGGAAGAGACAGAATCGTTGAGTGGATGTGTGAACAGGTCAAGAACCA
AGGGTGCGGTTCTTCCACTGCTGCAGTGGCGCAACAAAGAGATAGAAAAG
GCATATCAGCAGTTGGACCTGACCTGGGTAGAAGGGGCGACTACCGTGAT
GAAAGGGACGACTCTGTAGAGAAATATACTAAACTAATCTTACCTACTCT
CGTGCCCAAGATTGGTCGATTTTCGCCTAGGTTCGCCCCGTTGCGTGCAC
ACTAGCTGCCGGGTGTTCGACGTGCAGGCCTGGAGGCCTGCATGCCGAAG
ATAAGACATGCTTACGCCCAAACAGCCGCGCACACCACGCCACATGGTAC
CACCCCAGAAACTCAGAAACTCTCCACGCTCGTGCGGCCGATCGAACGCG
AAGCAGACAAACAAGCAGCGAGATGGGCGCGTCTCGCGATTCTAACACCG
TGACGACCATCGAGGAAGAGACAAAAAAATTGCTTCACACCTCCCCATTG
GCCGTGATGGGAAAACGGAGAGACCCACCGAATCCTAAATTATTTTAGTG
GGTGTACAATAGGCGTTTGCCCCGAAAATGCGTTCATGTTTGTATGAGAC
CGATCAGTGCCTACGAAACATTTCCCCAAAACCAGCCCACCACGAGCCCC
CCGGCGCTGGAAGCCCCATCCAAATTCAATGCTCACATTGACTGATGTGC
ATACAGCGGAGAACGAGGCAACAGCGTTTTCCCTTGCTTGCTTTCTTCTG
TGCCGACTCCCGTGCCACCCGCTCCCCTTTCGCCGGCAGGAGCTCCCGAG
AATAACGCGTGAGCGCCCGGCAGACTGGGCGCGGCTCGTGGAGGGCCTTG
ACCCCGTCACCGCGTACGTGGTCACCACGAAATGGGAATCGGCGGGAGGG
GCGGCCGACATGCCGGAGTTCTACGCTGCCGTATTCGGGACCGGCGAGGA
GGATGCAGCTGGGGCCCCGTCGGCAGCGGCGGAAGAGGGGGGTGGTGTTG
TGGGTGCCACTGGTAGTGACGTTGGAGTTGCGGGCGGCGTGGGTGGTAGT
AGTGGCGGGGGTGCTGGCGGGGTGTTGCTTCTGCCGGGGTGGGCTGATGA
AGCGGCAGCAGCAACAACATCAGCATTGAACACTGCAGGCGTTGGAGGAG
ACGGCGTCGATGTTGAAGCCGCGAGTCCTGCAGCAACCGCGCAGCAAGAA
AAGCAAAACGTGGCAGGCGCTGGTGATGTTCGGTCGGAAGAGGGGGTCAA
GGGTGTTGCTTTGCAAGAGCGGCTGGTGCGGTTGAGGAAGGCGTTCGCAA
AGGAGCAGTGCGCGGCGGTGTTGAAGCAGGCAACAGGGTGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7156:5665..10008-

>mRNA_L-elsbetiae_contig7156.15981.1 ID=mRNA_L-elsbetiae_contig7156.15981.1|Name=mRNA_L-elsbetiae_contig7156.15981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2520bp|location=Sequence derived from alignment at L-elsbetiae_contig7156:5665..10008- (Laminarionema elsbetiae ELsaHSoW15)
CGCAGGCCCTCTTGTGTGCCAGAACAAGACCTCCTCCAGATCAACCTTTG
GTTAGGGGCGATGGAGACGACGACCAACATGCACTACGATGCCAACAACA
ACTTGCTGTTCGTGCTCAAGGGGAGCAAGCGGGTCGCCCTCCTGCCTCCG
AACATGGCTGCCGGGGTGCAAGCCATGCCGCGCAGGCCCTCTTGTGTGCC
AGAACAAGACCTCCTCCAGATCAACCTTTGGTTAGGGGCGATGGAGACGA
CGACCAACATGCACTACGATGCCAACAACAACTTGCTGTTCGTGCTCAAG
GGGAGCAAGCGGGTCGCCCTCCTGCCTCCGAACATGGCTGCCGGGGTGCA
AGCCATGCCGGTGTTTTCTGAATCGGCGAACCACTCCAGGCTCCGGGCCG
CCGAGACGGACGCGGTGATGGAAAGCGCCGAGGCCCTGCGAAAGGGCGCC
GTGTACGCCGACGTGGCCGAAGGGGGTGTTTTCTGAATCGGCGAACCACT
CCAGGCTCCGGGCCGCCGAGACGGACGCGGTGATGGAAAGCGCCGAGGCC
CTGCGAAAGGGCGCCGTGTACGCCGACGTGGCCGAAGGGGAGGCTCTCTT
CATTCCAGAGGGCTGGTGGCACCAGGTCACGTCCTCGCGTGGAACTGTGG
CTGCCAACGTGTGGTTCAAGAGGCTCTCTTCATTCCAGAGGGCTGGTGGC
ACCAGGTCACGTCCTCGCGTGGAACTGTGGCTGCCAACGTGTGGTTCAAG
GGCGCACGCCCGGCGCTGTGCGAGGCTCCTTCGTCTCGGCACATGCGGGA
ATACTACCTGAGGTGTCTGGTTGAGTCTCTGCTCGCCGACCGGCTGCGCG
AGGCCGCGACGGAGAACGCAGCAGGGACGCCAGGGCGCACGCCCGGCGCT
GTGCGAGGCTCCTTCGTCTCGGCACATGCGGGAATACTACCTGAGGTGTC
TGGTTGAGTCTCTGCTCGCCGACCGGCTGCGCGAGGCCGCGACGGAGAAC
GCAGCAGGGACGCCAGGGGCGGCCTCTACGGACATCGAAGTGGCAGCAAC
GGGGGGTGGCGACGACGATGCCAGCAGACCACCAGGCTCCCGCGACGCAG
CAACAGAAGCTGCGGCGGTGGCGGCGGCGTCATCCCCGCTCTGCGACCCA
GCTTCCTCGGCTGAGCAGCGGAACACGTACCTCCGGGCCACCGGGATCGA
GCGCATGAAGCAGGGGCGGCCTCTACGGACATCGAAGTGGCAGCAACGGG
GGGTGGCGACGACGATGCCAGCAGACCACCAGGCTCCCGCGACGCAGCAA
CAGAAGCTGCGGCGGTGGCGGCGGCGTCATCCCCGCTCTGCGACCCAGCT
TCCTCGGCTGAGCAGCGGAACACGTACCTCCGGGCCACCGGGATCGAGCG
CATGAAGCAGGAGCTCCCGAGAATAACGCGTGAGCGCCCGGCAGACTGGG
CGCGGCTCGTGGAGGGCCTTGACCCCGTCACCGCGTACGTGGTCACCACG
AAATGGGAATCGGCGGGAGGGGCGGCCGACATGCCGGAGTTCTACGCTGC
CGTATTCGGGACCGGCGAGGAGGATGCAGCTGGGGCCCCGTCGGCAGCGG
CGGAAGAGGGGGGTGGTGTTGTGGGTGCCACTGGTAGTGACGTTGGAGTT
GCGGGCGGCGTGGGTGGTAGTAGTGGCGGGGGTGCTGGCGGGGTGTTGCT
TCTGCCGGGGTGGGCTGATGAAGCGGCAGCAGCAACAACATCAGCATTGA
ACACTGCAGGCGTTGGAGGAGACGGCGTCGATGTTGAAGCCGCGAGTCCT
GCAGCAACCGCGCAGCAAGAAAAGCAAAACGTGGCAGGCGCTGGTGATGT
TCGGTCGGAAGAGGGGGTCAAGGGTGTTGCTTTGCAAGAGCGGCTGGTGC
GGTTGAGGAAGGCGTTCGCAAAGGAGCAGTGCGCGGCGGTGTTGAAGCAG
GCAACAGGGTGGTGAGAGCTCCCGAGAATAACGCGTGAGCGCCCGGCAGA
CTGGGCGCGGCTCGTGGAGGGCCTTGACCCCGTCACCGCGTACGTGGTCA
CCACGAAATGGGAATCGGCGGGAGGGGCGGCCGACATGCCGGAGTTCTAC
GCTGCCGTATTCGGGACCGGCGAGGAGGATGCAGCTGGGGCCCCGTCGGC
AGCGGCGGAAGAGGGGGGTGGTGTTGTGGGTGCCACTGGTAGTGACGTTG
GAGTTGCGGGCGGCGTGGGTGGTAGTAGTGGCGGGGGTGCTGGCGGGGTG
TTGCTTCTGCCGGGGTGGGCTGATGAAGCGGCAGCAGCAACAACATCAGC
ATTGAACACTGCAGGCGTTGGAGGAGACGGCGTCGATGTTGAAGCCGCGA
GTCCTGCAGCAACCGCGCAGCAAGAAAAGCAAAACGTGGCAGGCGCTGGT
GATGTTCGGTCGGAAGAGGGGGTCAAGGGTGTTGCTTTGCAAGAGCGGCT
GGTGCGGTTGAGGAAGGCGTTCGCAAAGGAGCAGTGCGCGGCGGTGTTGA
AGCAGGCAACAGGGTGGTGA
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