mRNA_L-elsbetiae_contig7154.15977.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7154.15977.1
Unique NamemRNA_L-elsbetiae_contig7154.15977.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: D8LNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT9_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 1.850e-127
Identity = 213/225 (94.67%), Postives = 213/225 (94.67%), Query Frame = 2 
Query:  413 EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSMGRVPAPVVHKKATG-KPSATKAGGR--SRRSSKHGA 1078
            EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHG ELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSMGRV AP VHKKAT  K SAT  GG    RRSSKHGA
Sbjct:   52 EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGAELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSMGRVSAPSVHKKATTVKHSATGGGGARGGRRSSKHGA 276
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A835Z9H7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9H7_9STRA)

HSP 1 Score: 269 bits (688), Expect = 5.810e-85
Identity = 152/195 (77.95%), Postives = 170/195 (87.18%), Query Frame = 2 
Query:  413 EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSM-GRVPA 994
            EAMRSRQIAERLGVEEAHMLEFQQFNMVWD++M+DYE  AE+MV AM ERH  ELR+YQ+RLL  Q RPK+SRELLDLRRIQEHLA+AKDYAEAH+MKLKSDALEAWELE+WR KRQ ++ QRE KFK GKA EM ALL+RV  GREEQKKQRQ DLERLLQRYQNVK ELEAQQ LER+R ER++++  GRV A
Sbjct:   53 EAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMSDYEARAEEMVAAMLERHEEELREYQQRLLTTQSRPKYSRELLDLRRIQEHLARAKDYAEAHRMKLKSDALEAWELERWRTKRQGEMLQREQKFKQGKATEMQALLKRVQMGREEQKKQRQGDLERLLQRYQNVKMELEAQQNLERMRVERRAAARSGRVRA 247
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A6V1QLJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QLJ6_HETAK)

HSP 1 Score: 269 bits (688), Expect = 1.840e-84
Identity = 147/203 (72.41%), Postives = 170/203 (83.74%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSS 973
            + R E L      R  EAMRSRQIAERLGVEEAHMLEFQQFNMVWD++M +YE HA+D++ +M+ERH  ELR +Q++LL  QPRPKFSRELLDLRRIQEHLAK KDY EAHK+KLKSDALEAWE+E+WRN++Q ++ QRE+KFKHG    + AL +RV  GREEQKKQRQMDLERLLQRYQNVKSELEAQQ LERIRAER S+
Sbjct:   60 KNRLEELKMHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMENYEQHAQDLILSMKERHAAELRQFQQKLLDNQPRPKFSRELLDLRRIQEHLAKGKDYQEAHKIKLKSDALEAWEVEKWRNQKQQEMLQREAKFKHGXXXXLIALQKRVQTGREEQKKQRQMDLERLLQRYQNVKSELEAQQNLERIRAERMSA 262
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A7S2UZK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZK5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.460e-79
Identity = 140/203 (68.97%), Postives = 170/203 (83.74%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSS 973
            + R E L      R  EAMRSRQIAERLGVEEAHMLEFQQFNMVWD++M +YEHHA+++V AM+ERH  ELR++QR LL+ Q RPKFSRELLDLR+IQEHLA++KDY EAHK+KLKSDALEAWELE+W+++++ ++ Q+E+     K QE+ AL +R+  GREEQKKQRQMDLERLLQRYQNVKSELEAQQ LERIR+ER S+
Sbjct:   36 KNRLEELKLHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNMVWDRKMEEYEHHAQELVRAMKERHMAELREFQRNLLERQQRPKFSRELLDLRKIQEHLARSKDYQEAHKIKLKSDALEAWELEKWKSQKEQEMLQKEAXXXXXKQQELIALQKRIQTGREEQKKQRQMDLERLLQRYQNVKSELEAQQNLERIRSERHSA 238
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A7S3HDC8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDC8_9STRA)

HSP 1 Score: 254 bits (650), Expect = 4.450e-79
Identity = 138/190 (72.63%), Postives = 165/190 (86.84%), Query Frame = 2 
Query:  413 EAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSMG 982
            EAMRSRQIAERLGVEEAHMLEFQQFN++WD++M +YE HAE++V AM+ERH  ELRDYQR+L+  Q RPKFS++LL+LR+IQE LAK KDYAEAHK+KLKSDALEAWELE+W ++RQ DL Q+E+KFK  K QE+ AL +R+ +GREEQKKQR MDLERLLQRYQNVK+ELEAQQ LERIR E+ + S G
Sbjct:   52 EAMRSRQIAERLGVEEAHMLEFQQFNLIWDRKMTEYETHAEELVEAMKERHAAELRDYQRKLMGKQLRPKFSKDLLNLRKIQETLAKQKDYAEAHKIKLKSDALEAWELEKWHSERQQDLLQKEAKFKFNKQQELLALQKRIQSGREEQKKQRHMDLERLLQRYQNVKAELEAQQNLERIRMEKLAQSGG 241
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A7S2SB13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB13_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.820e-73
Identity = 134/200 (67.00%), Postives = 160/200 (80.00%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAER 964
            + R E L      R  EAMRSRQ+AERLGVEEAHMLE+QQFNM WD++M +YE HA ++V AMRERH  ELR++Q  LLQ Q RPKFSRELL+LRRIQEHLAK KDY EAHK+KLK DALEAWELE+W+N++Q ++ QRE+KF       + AL +R+  GREEQKKQR++DLERLLQRY+NVK+ELEAQQ LERIR ER
Sbjct:   36 KNRLEELKLHEENRRKEAMRSRQLAERLGVEEAHMLEYQQFNMDWDRKMGEYETHANELVEAMRERHKAELREFQESLLQKQQRPKFSRELLNLRRIQEHLAKQKDYTEAHKIKLKCDALEAWELEKWKNQKQQEMFQREAKFXXXXXXXLIALQKRIQTGREEQKKQRELDLERLLQRYRNVKNELEAQQNLERIRMER 235
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A812XSJ3_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSJ3_SYMMI)

HSP 1 Score: 235 bits (600), Expect = 3.580e-72
Identity = 129/184 (70.11%), Postives = 151/184 (82.07%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVK 916
            + R E L      R  EAMRSRQIAERLGVEEAHMLEFQQFNM+WD++MADYE HAE++V AM+ERH  ELR+YQRRL+  Q RPKFS++LL+LR+IQE LAK KDYAEAHK+KLK+DALEAWELE+W ++RQ DL  +E KFKH K QE+ AL +R+  GREEQKKQR  DLERLLQRYQNVK
Sbjct:   35 KNRLEELKLHEENRRREAMRSRQIAERLGVEEAHMLEFQQFNMIWDQKMADYESHAEELVEAMKERHAAELREYQRRLMTKQIRPKFSKDLLNLRKIQETLAKQKDYAEAHKIKLKADALEAWELEKWHSQRQTDLLAKEGKFKHVKQQELVALQKRIQTGREEQKKQRHQDLERLLQRYQNVK 218
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A7S2CQS6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQS6_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.720e-71
Identity = 131/200 (65.50%), Postives = 157/200 (78.50%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAER 964
            + R E L      R  EAMRSRQ+AERLGVEEAHMLE+QQFNM WD++M +YE HA ++  AM ERH  ELRD+Q  LL  Q RPKFSRELL+LR IQ HLA  KDY EAHK+KLK DALEAWEL++W+  +Q ++ QRE+KFKH K QE+ AL +R+  GREEQKKQR++DLERLLQRY+NVK+ELEAQQ LERIR E+
Sbjct:   36 KNRLEELKLHEENRRKEAMRSRQLAERLGVEEAHMLEYQQFNMDWDRKMNEYEKHASELADAMTERHKAELRDFQENLLHKQQRPKFSRELLNLREIQRHLAMQKDYTEAHKIKLKCDALEAWELDKWKILKQQEMFQREAKFKHQKQQELLALRKRIQTGREEQKKQRELDLERLLQRYRNVKNELEAQQNLERIRMEK 235
[Close]
BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: F0Y536_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y536_AURAN)

HSP 1 Score: 234 bits (598), Expect = 8.090e-71
Identity = 135/204 (66.18%), Postives = 157/204 (76.96%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSS 976
            + R E L      R  EAMRSRQIAERLGVEEAHMLEFQQFN++WDK+M++YE+HA D+V AM+ERH  ELRD+Q  LLQ Q RPKFSRELL+LRRIQEHLA+ KDY EAHK+KLK DALEAWELE+W+N +Q ++ QRE+KFKH K QE+ AL +RV  GREEQKKQ              VKSELEAQQ LERIRAER +SS
Sbjct:   76 KNRLEELKMHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNIIWDKKMSEYENHAADLVEAMKERHAAELRDFQGALLQRQARPKFSRELLNLRRIQEHLARQKDYTEAHKIKLKCDALEAWELEKWQNGKQQEMFQREAKFKHQKQQELVALQKRVQTGREEQKKQXXXXXXXXXXXXXXVKSELEAQQNLERIRAERMASS 279
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BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Match: A0A1V9ZAE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZAE8_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.680e-69
Identity = 129/196 (65.82%), Postives = 162/196 (82.65%), Query Frame = 2 
Query:  365 EERQEPLNHIARIRDGEAMRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHGMELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSDALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQRQMDLERLLQRYQNVKSELEAQQKLERI 952
            + R E L      R  EAMRSRQIAERLGVEEAHMLEFQQFN+VWDK+M +YE + E++V  MR+RH  EL ++Q++LL+ Q +PKFS+ELL+LR+I+EHLA+ KDYAEAHKMKLK+DALEAWE+E+WRN +Q ++ QRE KFK  + QE+ AL +R+ +GREEQKKQRQ+DLERLLQRYQNVK+EL+ QQ LERI
Sbjct:   36 KNRLEELKVHEENRRKEAMRSRQIAERLGVEEAHMLEFQQFNVVWDKKMEEYEQNIEELVLNMRDRHKSELLEFQQKLLEKQTKPKFSKELLNLRKIEEHLARQKDYAEAHKMKLKADALEAWEMEKWRNSKQQEMFQREVKFKQRQRQELDALQKRIQSGREEQKKQRQLDLERLLQRYQNVKAELQQQQNLERI 231
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7154.15977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNT9_ECTSI1.850e-12794.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9H7_9STRA5.810e-8577.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1QLJ6_HETAK1.840e-8472.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZK5_9STRA1.460e-7968.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3HDC8_9STRA4.450e-7972.63Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2SB13_9STRA1.820e-7367.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812XSJ3_SYMMI3.580e-7270.11Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2CQS6_9STRA1.720e-7165.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y536_AURAN8.090e-7166.18Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A1V9ZAE8_9STRA1.680e-6965.82Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7154contigL-elsbetiae_contig7154:1165..5245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.0
Seed ortholog evalue4.8e-101
Seed eggNOG ortholog2880.D8LNT9
KEGG koko:K20929
Hectar predicted targeting categoryother localisation
EggNOG OGs28KHC@1,2QSYJ@2759
EC1.2.3.15
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_005830.1
Exons7
Model size1322
Cds size663
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816794.657658-UTR-L-elsbetiae_contig7154:1164..14341622816794.657658-UTR-L-elsbetiae_contig7154:1164..1434Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 1165..1434 +
1691683818.7280662-UTR-L-elsbetiae_contig7154:1164..14341691683818.7280662-UTR-L-elsbetiae_contig7154:1164..1434Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 1165..1434 +
1622816794.671569-UTR-L-elsbetiae_contig7154:2203..23451622816794.671569-UTR-L-elsbetiae_contig7154:2203..2345Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 2204..2345 +
1691683818.737867-UTR-L-elsbetiae_contig7154:2203..23451691683818.737867-UTR-L-elsbetiae_contig7154:2203..2345Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 2204..2345 +
1622816794.6809766-UTR-L-elsbetiae_contig7154:2890..28961622816794.6809766-UTR-L-elsbetiae_contig7154:2890..2896Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 2891..2896 +
1691683818.7486691-UTR-L-elsbetiae_contig7154:2890..28961691683818.7486691-UTR-L-elsbetiae_contig7154:2890..2896Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 2891..2896 +
1622816794.744861-UTR-L-elsbetiae_contig7154:5004..52451622816794.744861-UTR-L-elsbetiae_contig7154:5004..5245Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 5005..5245 +
1691683818.8263795-UTR-L-elsbetiae_contig7154:5004..52451691683818.8263795-UTR-L-elsbetiae_contig7154:5004..5245Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7154 5005..5245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816794.6925426-CDS-L-elsbetiae_contig7154:2896..30341622816794.6925426-CDS-L-elsbetiae_contig7154:2896..3034Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 2897..3034 +
1691683818.7579782-CDS-L-elsbetiae_contig7154:2896..30341691683818.7579782-CDS-L-elsbetiae_contig7154:2896..3034Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 2897..3034 +
1622816794.7023098-CDS-L-elsbetiae_contig7154:3645..37471622816794.7023098-CDS-L-elsbetiae_contig7154:3645..3747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 3646..3747 +
1691683818.7671206-CDS-L-elsbetiae_contig7154:3645..37471691683818.7671206-CDS-L-elsbetiae_contig7154:3645..3747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 3646..3747 +
1622816794.7149262-CDS-L-elsbetiae_contig7154:3978..41311622816794.7149262-CDS-L-elsbetiae_contig7154:3978..4131Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 3979..4131 +
1691683818.7825632-CDS-L-elsbetiae_contig7154:3978..41311691683818.7825632-CDS-L-elsbetiae_contig7154:3978..4131Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 3979..4131 +
1622816794.72471-CDS-L-elsbetiae_contig7154:4402..44911622816794.72471-CDS-L-elsbetiae_contig7154:4402..4491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 4403..4491 +
1691683818.7991788-CDS-L-elsbetiae_contig7154:4402..44911691683818.7991788-CDS-L-elsbetiae_contig7154:4402..4491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 4403..4491 +
1622816794.7347908-CDS-L-elsbetiae_contig7154:4823..50041622816794.7347908-CDS-L-elsbetiae_contig7154:4823..5004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 4824..5004 +
1691683818.8140275-CDS-L-elsbetiae_contig7154:4823..50041691683818.8140275-CDS-L-elsbetiae_contig7154:4823..5004Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7154 4824..5004 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7154.15977.1prot_L-elsbetiae_contig7154.15977.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7154 2897..5004 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7154.15977.1

>prot_L-elsbetiae_contig7154.15977.1 ID=prot_L-elsbetiae_contig7154.15977.1|Name=mRNA_L-elsbetiae_contig7154.15977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
MRSRQIAERLGVEEAHMLEFQQFNMVWDKRMADYEHHAEDMVFAMRERHG
MELRDYQRRLLQAQPRPKFSRELLDLRRIQEHLAKAKDYAEAHKMKLKSD
ALEAWELEQWRNKRQADLCQRESKFKHGKAQEMAALLQRVMAGREEQKKQ
RQMDLERLLQRYQNVKSELEAQQKLERIRAERQSSSMGRVPAPVVHKKAT
GKPSATKAGGRSRRSSKHGA*
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mRNA from alignment at L-elsbetiae_contig7154:1165..5245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7154.15977.1 ID=mRNA_L-elsbetiae_contig7154.15977.1|Name=mRNA_L-elsbetiae_contig7154.15977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4081bp|location=Sequence derived from alignment at L-elsbetiae_contig7154:1165..5245+ (Laminarionema elsbetiae ELsaHSoW15)
ACCTGATACAGTGTCTGGAAAAGCGTCCGGCGCAAGAATTGGTTTACCGG
TAGATCTCGGCAAGCGGTAGCATACAGCGGTTACTCTCTGCTCTTAGCGA
CGATCAAAAGACGTTGTCCAAGGTTCCACCGCGTTCGATCGTGCGCGGGA
GAGGTCTCGGTTCAACCCGGGCTCCCGTTATTTTTGTACTCTAGCGTACG
CTAGGAGCTAAGGGAGACCATGGAAGTGACGGAGGACTCAGCGGTGAAGG
ATTTCTTGGAGATCCTTGAGGTGCGATGGACGGCGGACTTATATGGAGAG
CAGGCGTGGGGAAAATAGGGGTCGTCGGCTAATTTGCGGCGAACAGCAGT
CATCTAGACTATATTGTACCTACATCGGCATGTTTGGTTCTTCGAAGGTT
GCTACAATTCGTCAGATGCAGGGGCCAAGCTCCAAGACGGGGAGCTGTAG
GGAATCTCGAGCGCGGCTAAGGCTTTTTTGGTGCAAACATGGTCTCAGGC
GCTCCTCACTCTGTCCGAAATATTTCGGGAGGTGGTGATGTGTTGACGGC
TTCAGCACAACAGAGTATCTTGTACGAGCAGTCGATATGCCCATTCATCC
CCAAGGCATCGGGACGGCGTATATACCTGATGCATATCGAATAGGTCCTA
TGTACTGCTGCAGGCTGGTAAAGACGAACCTGAGGGGTTGAAGTCAACTC
CGTATGTGTTTGTTCGTCTCGGAGAATGCGGGCTGGAGATTTCATGCAGA
AACACAGCAACAGCATGCTATTTAGGTATGTAAATATGTAAGTAGGTATG
TAAATATGTAAGTATACCGTACGCGCACAAGCCACACGGCGATCAGGCAC
ATACCGGCACCACGCAGGATGCTCAATACTCGCATATCTCTACCAGGGCG
GTATGTCTACTTGTAATGTGGCGAAGGGTCCTGGGATAGAAACAACGATC
ATAGTCTACGAGTACAACCTTGGGGAAAAACTACACCTGACCCTTCCATG
AAAACAAACACGTTCCCATGTATTAACTGCTTTTCTCAGGAGCATCGGCG
CAACTGTGAGCGGCAGGGGAAATATGTAGAAGCGGAAATTGCCAAGAACC
GCTTGGACGAGCTCAAGCTTCACGAGGAGAACAGAAGAAAGGCAAGAACC
TCTCAACCATATTGCCAGGATTCGGGACGGGGTTTCACTTGATACTCTCG
CCGGAAGGACTAGATAGACTACATAGTCTCGCGAAGGAGAGCACAAGAAC
GGCAAGGGGGCTTCAAACCTCCTTAGTAGGGCCGCACGTCCTTGTGGCTA
AATACTTTGTATCCCCAAGTGATAGGCCAAACTTCCGGACCCTATTTTGC
CACGCATCACCAATTCCTTGATTATAATCCCCATTAACTGCTCCCTGGTG
TTTTTGGGGGCAGTTGATAGGGATTCTAGAGTCAGAATTGGGCGCAAGGT
GCTGCTGTGCGTAAGATCTAATCACAGCCTTGGAAAACTGGAAAAAAAAT
TATGTAGCGTCGTTACCAGGGTTAAACCCACACACTTGATGGATGATCGG
GCTTCCAGACGATGGCGACCATGTGATCAATTGTCTTCAGCAGACAAGCT
CCGGGCAGTTCGGACAAAGGCTAGAATCGTCGACAAAATATCTTCGCCGC
GGTAACAGCGTCATGAACAACCGCATAAAAGAACGTTTCGCTCTGCACGT
GTGCATCGATGGATGGCATCACGCAGGAGGCGATGCGCTCGAGGCAGATT
GCGGAGAGGCTTGGTGTGGAGGAGGCCCACATGCTGGAGTTCCAGCAATT
CAACATGGTCTGGGACAAGAGGATGGCCGACTACGAACACCATGCTGAAG
ATATGGTGTTCGCCATGAGGGTGCGCGAACCGAGTGTTTACTTCCAAATC
AGAGGAGGTGAAGGGGAGGGGGGGGGGTTCGGAACTGCCGGGGCGCTGCA
CTGAAAGGTGGTTGGAAGATCATGTACGCTCTGAACCACTAGTTTCCTAC
TAAAGATCCTGATCTGTGACTTATTGTACCTGAGAGCAGGGGTTGACGTC
TGCACCTCTCGAGTGGGTTTTACGTCGATATACTACATGGAAAAGGGCAT
TGGAATGCGGAGGGTAGAAACCAGGCAAGAGAGAGCTACCGCTTTCGCCC
AGATCGACTGCTGTCACTGGCAGGCCCTTATCGTTTTCATGGCAGATATT
GTGCCTTTATTTATCCAGAGATGTTTGTTTCGTTGAGCAAAGAGTCGAGA
GAAGAGCCCCGAAGACCACACAACACCTGTGTCTGGCCTTAGGATTAACG
ATCCCGATGCTCTCCTACTAAAGGTTAAGAGTTTTGAAATAGAGAGGGTC
CTCCTTTCTGCATAAAGGGGGGCCCTCTGCATGAAATGGAAAGGGGCGCT
ATTTCTTGAACGGAGAGGGTCCCTCTCGCCTTTCACTTCAAAACATCTGA
ACCAGCAACGTTGATGCCGCGGTGTTGGCAGGAAAGGCACGGTATGGAGC
TTCGCGACTATCAAAGGCGGCTGCTGCAGGCCCAGCCACGCCCAAAGTTC
AGCCGTGAGCTTCTAGACCTTCGACGGATACAGGTCAGCCGAGTGGATGG
CGCGTTTCGTGCTGTCACGCGTGCAAACGGACAGACATGCATCCATTCTG
TTCGCTTTGTAGTCTGTTTTTTCTGCCCTTCAGAAAGCCTGCCGTGACCA
ATCAAACGCCTTGAGAGAGGCACGGTGCGTCAAGATTACGACTGCCCACG
AGAACCCAATGTTGACGTAGCGTGCGATTCCGGCCTCCAATCTACCTTGT
ACGAATGATTCCAGGAGCACCTCGCCAAGGCCAAAGACTACGCTGAGGCT
CACAAGATGAAGCTCAAGTCCGACGCCCTGGAAGCGTGGGAGCTGGAGCA
GTGGAGGAACAAAAGGCAGGCTGACCTGTGCCAGAGGGAAAGCAAGTTCA
AGCACGGAAAGGCGCAGGTAGGCAGACGCCTCCTATCACGCGGAACATTC
CCTTCTGTTTCAACAACGGTCCACAGCGGAACCCCTATGGTAAAGAATAT
ATTGCTCCGATGCCAAAACTTTCCCTACTAAGTACTGGAATTTTTCATCG
GCTCCCGTCGGCCCGGCATAGGGGTTATTAGCGACCTGTGCAGGCAGCCG
ATGTGTCCGTCGCTCTGTCATTCTACCACCCCCCCTGCGTACCTCACCAC
AGCGTTGTTTGACATCCCATGGTTTGTTTGGGTTCTAGGAAATGGCGGCG
TTGCTTCAGAGGGTGATGGCGGGCAGAGAAGAGCAGAAGAAGCAGCGGCA
GATGGACCTCGAGCGGTTGCTGCAAAGGTCAGTGTCGGTGGGGCTGTTGC
ACCAGGAGAAGTATTCCGTGTAGACACACTTGCCTCTTGTCTGTGTCGGC
TGGTTGGAGCCATCTTTGCACGATCCAATGCACAAGAATTTCAAGACGCA
AGATGTTGTGGAGATACATGTTCTCTGAGCGCACGGTGCCAGAGTCGCCC
TAGCTGTTGCGTGCGCGTGGCATACGGCCTCTGAGTGTTCCTTGAAACCA
GAAACAATAATTTCGAAGAGAGAAAGAAGATAACCCAGTAGAAAAACAGC
ACACAATTCTGGCGCTCTTAACGCGCGATGAACACAACTCGTTGCAAAAT
ACTCGACAGGTACCAAAACGTGAAATCAGAGCTCGAGGCACAGCAAAAGC
TCGAAAGAATCCGCGCCGAACGCCAGTCCTCCTCGATGGGACGCGTACCG
GCTCCGGTGGTACACAAAAAGGCCACCGGCAAGCCCTCGGCAACCAAGGC
GGGGGGTAGATCCAGGCGAAGCAGCAAGCATGGAGCTTGAACGTCATTTT
GGTAGATGTATGTTTGAATGTGTATTTTAAGGATAGGACTGTTTGCCTCG
AAACGAATCCCTCTTATGTATCTGTAAAGGAAAAAACGATCGTCATGAAC
ATTTTTGCAGGAGTGTTCCAACGAGTTGCTGGGTCGTCATATGTACATCG
CGTGATTGATACTGGGAGGGGCGGAAGGGGATAGTCCCCTAAGCTTTTAC
TGCGTGGATGCTAGGTTTTGCGAACTGGGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7154:1165..5245+

>mRNA_L-elsbetiae_contig7154.15977.1 ID=mRNA_L-elsbetiae_contig7154.15977.1|Name=mRNA_L-elsbetiae_contig7154.15977.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1326bp|location=Sequence derived from alignment at L-elsbetiae_contig7154:1165..5245+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCTCGAGGCAGATTGCGGAGAGGCTTGGTGTGGAGGAGGCCCACAT
GCTGGAGTTCCAGCAATTCAACATGGTCTGGGACAAGAGGATGGCCGACT
ACGAACACCATGCTGAAGATATGGTGTTCGCCATGAGGATGCGCTCGAGG
CAGATTGCGGAGAGGCTTGGTGTGGAGGAGGCCCACATGCTGGAGTTCCA
GCAATTCAACATGGTCTGGGACAAGAGGATGGCCGACTACGAACACCATG
CTGAAGATATGGTGTTCGCCATGAGGGAAAGGCACGGTATGGAGCTTCGC
GACTATCAAAGGCGGCTGCTGCAGGCCCAGCCACGCCCAAAGTTCAGCCG
TGAGCTTCTAGACCTTCGACGGATACAGGAAAGGCACGGTATGGAGCTTC
GCGACTATCAAAGGCGGCTGCTGCAGGCCCAGCCACGCCCAAAGTTCAGC
CGTGAGCTTCTAGACCTTCGACGGATACAGGAGCACCTCGCCAAGGCCAA
AGACTACGCTGAGGCTCACAAGATGAAGCTCAAGTCCGACGCCCTGGAAG
CGTGGGAGCTGGAGCAGTGGAGGAACAAAAGGCAGGCTGACCTGTGCCAG
AGGGAAAGCAAGTTCAAGCACGGAAAGGCGCAGGAGCACCTCGCCAAGGC
CAAAGACTACGCTGAGGCTCACAAGATGAAGCTCAAGTCCGACGCCCTGG
AAGCGTGGGAGCTGGAGCAGTGGAGGAACAAAAGGCAGGCTGACCTGTGC
CAGAGGGAAAGCAAGTTCAAGCACGGAAAGGCGCAGGAAATGGCGGCGTT
GCTTCAGAGGGTGATGGCGGGCAGAGAAGAGCAGAAGAAGCAGCGGCAGA
TGGACCTCGAGCGGTTGCTGCAAAGGAAATGGCGGCGTTGCTTCAGAGGG
TGATGGCGGGCAGAGAAGAGCAGAAGAAGCAGCGGCAGATGGACCTCGAG
CGGTTGCTGCAAAGGTACCAAAACGTGAAATCAGAGCTCGAGGCACAGCA
AAAGCTCGAAAGAATCCGCGCCGAACGCCAGTCCTCCTCGATGGGACGCG
TACCGGCTCCGGTGGTACACAAAAAGGCCACCGGCAAGCCCTCGGCAACC
AAGGCGGGGGGTAGATCCAGGCGAAGCAGCAAGCATGGAGCTTGAGTACC
AAAACGTGAAATCAGAGCTCGAGGCACAGCAAAAGCTCGAAAGAATCCGC
GCCGAACGCCAGTCCTCCTCGATGGGACGCGTACCGGCTCCGGTGGTACA
CAAAAAGGCCACCGGCAAGCCCTCGGCAACCAAGGCGGGGGGTAGATCCA
GGCGAAGCAGCAAGCATGGAGCTTGA
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