prot_L-elsbetiae_contig7151.15973.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7151.15973.1
Unique Nameprot_L-elsbetiae_contig7151.15973.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length610
Homology
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A6H5L7R8_9PHAE (ERCC4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L7R8_9PHAE)

HSP 1 Score: 602 bits (1553), Expect = 4.250e-208
Identity = 359/601 (59.73%), Postives = 397/601 (66.06%), Query Frame = 0
Query:    1 MAGRGRGGGRFGGDRGWT------ARRGGXXXXXXXXXXGMV--CACEANAPLLLELRNFDEECLRTGKVKLRHGLKRAMRSLEKYPLPVTTEKEACALEGVGSFTARRMLRGLSMAVPAAGGNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSALRMNLRPRHSRSHGRGAAAKTTGRPLSLASNFAALRGDVGDSGSGALTPDVTPKRPTSRARREDVGEGAGLSGASSKAPRFFSGDWEAWLIVDNREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDPTSEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDDAARMKRVDDLLAGLVCRGGAGTNKLPQPLRRLLCRLFVGESVD 593
            MAGRGR GGRFGG  G +      + RGG               CAC +N PLL+EL++ DEECLRTGKVKLRHGL RAM+SL++YPLP+TTEKEACALEGVGSFTARRMLRGL  A P    ++                                                                             S LRMNLR       G  A   T GRPLSLASNFAALRG     G    TPDVTPKRPTSRAR+E   E +G +  SSKAP FFSG WEAWL+VDNREH+FMS+QS+LLQKG+RCETRQLPLGDMLWIAR+++DPTSEVLLGYIVERKTASDLASSI+DGRY+EQKRRL+LSGLRRRIYLVEGNL+HQ QLAP+ALRTAL SSQA GGLAVVQCD LRD+V FLARTHRH+ASLL  +CR     S                              +LRPAMTYGEYAQGCAKRAG+TTVR+VLGAM+RQ PGCSAARAEA+VR FDSPLGLMLALERAA G   G AG     DDAARMKR D LL GLVC GGAGTNKLPQPLRRLLCRLF+G+SVD
Sbjct:    1 MAGRGR-GGRFGGQDGNSHGKIVASGRGGSDASALARVLNTADCCACVSNGPLLVELKSLDEECLRTGKVKLRHGLMRAMKSLKRYPLPITTEKEACALEGVGSFTARRMLRGLPPAGPEPENSSGVRRTDEENIEPSGSSSSRGGGARKSSNKSTGTSSVTNADAGSRLPSD---------------------------TNSLLRMNLRV------GSSATTTTGGRPLSLASNFAALRG-----GGEETTPDVTPKRPTSRARKE---EASGETARSSKAPSFFSGQWEAWLVVDNREHEFMSVQSSLLQKGIRCETRQLPLGDMLWIARKRDDPTSEVLLGYIVERKTASDLASSIIDGRYEEQKRRLKLSGLRRRIYLVEGNLNHQEQLAPAALRTALVSSQACGGLAVVQCDGLRDTVNFLARTHRHIASLLELSCRREAGLSPVRGSRECSGGRA-----------------MLRPAMTYGEYAQGCAKRAGSTTVRQVLGAMVRQAPGCSAARAEAIVRAFDSPLGLMLALERAASG--DGIAG-----DDAARMKRADALLGGLVCSGGAGTNKLPQPLRRLLCRLFLGDSVD 535          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A836CKB8_9STRA (Restriction endonuclease type II-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB8_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.250e-55
Identity = 130/318 (40.88%), Postives = 171/318 (53.77%), Query Frame = 0
Query:  277 FFSGDWEAWLIVDNREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARR--KNDPT--SEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDDAARMKRVDDLLAGLVCRGGA--GTNKLPQPLRRLLCRLFV 588
            F  G W   LI D RE    + Q+ +L   + CE R LPLGDMLW+AR   +  P+   EVLLGYIVERKTASDL SS+VDGR+ EQK R+   GL R IYLVEG ++H ++L P+ LRTA+A +QA+ G+ V+   ++ +SV  L R HRH+A+ L  ACR    S+                               +RP M+  +Y   C K      VR V G  +RQV GCSAARA A++ E+ +PL  MLA+E A E         ERC +          LLAG+    GA     KL +PL+  LC+L+ 
Sbjct:    8 FAGGIWTPVLIFDTREEHAQASQAAVLNANMLCEVRSLPLGDMLWVARNMDRQSPSYLQEVLLGYIVERKTASDLGSSMVDGRFHEQKHRMARHGLGRVIYLVEGPITHTTRLTPAHLRTAMAHTQAQDGMTVLWTANVTESVAHLQRVHRHIAASLEAACRGITASAPGTG---------------------------VRPIMSMDQYRAQCGKGKDGD-VRYVFGCQLRQVYGCSAARAAAILNEYPTPLDFMLAMEAAGES--------ERCLE----------LLAGIKGEPGARMAEAKLTKPLQAALCKLYA 279          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A7S3XK47_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK47_HETAK)

HSP 1 Score: 131 bits (329), Expect = 1.570e-30
Identity = 97/279 (34.77%), Postives = 134/279 (48.03%), Query Frame = 0
Query:  298 MQSTLLQKGVRCETRQLPLGDMLWIAR---------------------RKNDPTSEVL-----------LGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLL---LQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGD 541
            +Q+ LL  GV CE  QL +GDM+W AR                     +K+  T+ +L           LG++VERKTA DLA SI+DGRY EQK RL+ SGL +  YLVEG+LS Q  L   +LRTA+AS+  + G +V +C +L +SV +LARTH  VA  L   + A +S  P                                 + P MTY  Y   C K   A  V+ + G  ++Q PG S  + +A++  F +P  LM   +R  + G   D
Sbjct:    2 VQAKLLAVGVACEVGQLAVGDMVWAARWRRPGWHADIPLTQTLNQPQKKKSKSTATILENLHKNEELFVLGFVVERKTAEDLAKSIIDGRYAEQKVRLKKSGLSKVTYLVEGSLSGQDVLPTKSLRTAMASTLIQHGFSVQRCANLDESVRWLARTHHQVARQLGYAVAAAQSGDPLDSFKA---------------------------VLPVMTYRHYHDQCGKLK-AQKVQDIFGMQLKQFPGMSVGKIQAILERFPTPQRLMDGYKRYVDEGHDAD 252          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A7R9UCP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCP7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.380e-26
Identity = 72/158 (45.57%), Postives = 98/158 (62.03%), Query Frame = 0
Query:  272 SKAPRFFSGDWEAWLIVDNREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDPTSEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLL 429
            S+ P     D    L+ D+RE    ++QS LLQ+GV CE R L LGDM+WIA+ +     E +L +I+ERK+A+DLA SI+DGRY EQK RLR SG+    YLVEG  S Q +L   ALRTA+A ++   G  V+  +++  S E L R H  + SL+
Sbjct:  424 SRCPPVPFEDLSVILVQDHRETRKDAVQSHLLQRGVSCENRALHLGDMIWIAQDRRSDV-EYVLDFIIERKSAADLAESIIDGRYAEQKSRLRASGIGHVTYLVEGAASSQERLPKQALRTAMAETRVLPGFRVLHTNNIAQSAEELRRMHEQIKSLM 580          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A4D9DDT9_9STRA (ERCC4 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDT9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.770e-23
Identity = 95/299 (31.77%), Postives = 135/299 (45.15%), Query Frame = 0
Query:  281 DWEAWLIVDNREHDFM-SMQSTLLQKGVRCETRQLPLGDMLWIARRKND------------------------------PTSE---VLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSG--LRRRIYLVEGNLSH-QSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHV----ASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPA---MTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAE 535
            +WE   ++D  EH+   S+++TLLQ G+RCE R L L D+LW+ARR+ +                              PT E   ++L Y++ERKT  DLASSI DGRY EQK R+   G  + R  YLVEG L      + P+ALRTAL S+Q   G+ V+Q  SL  ++  L R H  +    A  L  AC  +  +S                                 PA   +   EY   C K  G  +VR +  A +  +   S A+++AVV  + +P  L  A++   E
Sbjct:  350 EWEVVALLDRVEHENNPSIEATLLQAGIRCEVRVLRLADVLWVARRRAEGRLGGDGGGRAAAGIAVDPGDAGGLREGGHPTEEEEEIMLRYMIERKTVPDLASSIKDGRYREQKGRMLGVGREIDRAFYLVEGRLEQLNDMIRPAALRTALISTQVVHGMPVLQTASLDQTIALLQRMHTRISHEFAHFLQAACGHNRLNSEGDLLPATESFDGLAQSERLSEYLQKHSKAFPLPASRIIRLAEYQHLCRKTVGNLSVRAMFTAQLCAIDKVSEAKSKAVVNAYSTPSRLARAMQSITE 648          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A8K1CQN6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQN6_PYTOL)

HSP 1 Score: 114 bits (286), Expect = 5.860e-23
Identity = 88/263 (33.46%), Postives = 131/263 (49.81%), Query Frame = 0
Query:  281 DWEAWLIVDNRE----HDFMSMQSTLLQKGVRCETRQLPLGDMLWIARR-KNDPTS------EVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALER 532
            +W+  L++D+RE     +   ++  LL+  V CE R L +GD+ WIARR + DP +      E++L  I+ERK  +DL+ SIVD RY+EQK RL+ SG+   IYLVEG+LS Q+ +  S L+TAL  +Q +    V  C +  ++V FL   H  + + L  + R   P                                  RP  T+  +     K+A   TV ++   M+ QVPG SA+R  A+  +F +   L  ALER
Sbjct:  403 EWQLVLLLDHREILSRRNRDILERKLLECNVTCEVRVLNVGDVQWIARRYRRDPLTDSCSVDELMLNVIIERKEVNDLSGSIVDRRYNEQKTRLKESGMTHVIYLVEGSLSQQTTVRTSGLQTALCRTQVQDQFFVQLCQNADETVAFLRGVHARLLAKLPLSMRCRNPERSTSIRPPYFASFSASTAAVTPEDWCRQ---FCRPVRTFTAFNAQFRKKAD-FTVGELYQMMLMQVPGLSASRTVALSAQFPTFHHLCEALER 661          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A067BND5_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BND5_SAPPC)

HSP 1 Score: 111 bits (277), Expect = 6.310e-23
Identity = 92/267 (34.46%), Postives = 130/267 (48.69%), Query Frame = 0
Query:  281 DWEAWLIVDNREHDFMSMQST----LLQKGVRCETRQLPLGDMLWIARRKNDPT-------SEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHV--ASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAA 534
            +WE  L++D+RE    S +S     LL+ GV CE R L LGDM+WIARR   PT        E +L  IVERK  SDLA SI+D RY EQK+RL  +GLR  +YL+EG+L+ ++ L  +AL TAL  +Q      V    S  ++V FL+  H H   A   +   R++ P +                                    ++GE+ +   K+A  TT  ++   M+ QVPG SA RA  +     + L L    ++AA
Sbjct:   84 EWEIVLLLDHREMVSRSNKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHR-PTFGGRAIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPTAASIGRLPACLRDFTQLIPTTW-------------QSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 335          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A1V9ZBA3_9STRA (Crossover junction endonuclease MUS81-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBA3_9STRA)

HSP 1 Score: 113 bits (283), Expect = 7.130e-23
Identity = 89/263 (33.84%), Postives = 127/263 (48.29%), Query Frame = 0
Query:  281 DWEAWLIVDNRE----HDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDP-----TSEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQA--CRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCA--KRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLAL 530
            +WE  L++D+RE     +    +  LL+  V CE R L LGDMLWIARR           E +L  +VERK  +DLA SI+D RY EQK+RL  SGLR  +YLVEG+LS ++ +  + LRTAL  +Q      V    +  ++V FLA  H HV     ++  CR+  P +                               L P M++  YA   A  ++  A +  ++   M+ Q+PG SA RA+A+     +   L  AL
Sbjct:  264 EWEVVLLLDHREMLSRRNPAVFERKLLEAHVTCEVRALHLGDMLWIARRGRQDQGRTVVEEFVLDVVVERKAVTDLALSIIDKRYTEQKQRLAESGLRYVVYLVEGSLSTETAIGAAGLRTALTRTQVLNNYLVHHAATADETVAFLAALHWHVVGAFRESYRCRNCAPPTSAGPPPPAPLVDFTQ----------------LLP-MSWQPYADFNATFRKKAAPSAGELYQMMLMQIPGISAGRAQALGTAHPTFASLWAAL 509          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: UPI001ED82114 (crossover junction endonuclease MUS81 n=1 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED82114)

HSP 1 Score: 112 bits (279), Expect = 3.210e-22
Identity = 103/340 (30.29%), Postives = 151/340 (44.41%), Query Frame = 0
Query:  268 SGASSKAPRFFS---GDWEAWLIVD------NREHDFMSMQSTLLQKGVRCETRQLPLGDMLWIARRKNDPTS---------EVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVE--GNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDDAARMKRVDDLLAGLVCRGGAGTNKLPQPLRRLLCRLF 587
            S A+S+ P   S   G +E  L VD        +H    +   L + GV  + R+L +GD LW+AR K +P           E++L YIVERK   DL  SI+DGR+ EQK RL+  GLRR IYLVE  G  +    L  S L+ A+ ++Q   G  V +   +R+S  +L    RH+  L  Q C   C S          XXXXX                     +++ E+  G  K     TVR+V    + Q+ G S  +A A++  ++SP  L+ A E+              C  +A + K +  +  G + R       L   L R +C+L+
Sbjct:  297 SQATSRKPNLGSLLPGAYEIILCVDFIETTGGSQHRKQELVKELQRNGVNFDVRKLNVGDFLWVAREKVEPVPGQLRAPAGRELVLDYIVERKRMDDLCGSIIDGRFREQKFRLKRCGLRRPIYLVEECGTAASHLSLPESTLQQAIVNTQVVDGFFVKRVQDVRESAAYLTVMTRHLTKLY-QNCTLICRSRELEGDGGSDXXXXXGPSCSL---------------ISFAEFNHGAVKNK-CQTVREVFARQLMQISGLSGDKAAAILEHYNSPHSLLTAYEQ--------------CVSEADKEKLLSSIRYGKLKRN------LGPALSRTVCQLY 599          
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Match: A0A067CHT1_SAPPC (ERCC4 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHT1_SAPPC)

HSP 1 Score: 110 bits (275), Expect = 7.880e-22
Identity = 92/267 (34.46%), Postives = 129/267 (48.31%), Query Frame = 0
Query:  281 DWEAWLIVDNREHDFMSMQST----LLQKGVRCETRQLPLGDMLWIARRKNDPT-------SEVLLGYIVERKTASDLASSIVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAKGGLAVVQCDSLRDSVEFLARTHRHV--ASLLLQACRSSCPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRPAMTYGEYAQGCAKRAGATTVRKVLGAMMRQVPGCSAARAEAVVREFDSPLGLMLALERAA 534
            +WE  L++D+RE    S +S     LL+ GV CE R L LGDM+WIARR   PT        E +L  IVERK  SDLA SI+D RY EQK+RL  +GLR  +YL+EG+L+ ++ L  +AL TAL  +Q      V    S  ++V FL+  H H   A   +   R++ P                                      ++GE+ +   K+A  TT  ++   M+ QVPG SA RA  +     + L L    ++AA
Sbjct:  275 EWEIVLLLDHREMVSRSSKSVFERKLLEAGVTCEVRGLHLGDMMWIARRHR-PTFGGRPIEEEFVLDVIVERKAVSDLALSIIDKRYTEQKQRLADAGLRYVVYLLEGSLAVETILGATALATALTRTQVLNNYLVHHAASPDETVAFLSALHWHTVRAFSAVYKVRNAAPPVAASIGRPPACLRDFTQLIPTTW-------------QSFGEFNETFRKKAAPTT-GELYQMMLMQVPGISATRARDLGAAHPTFLSLWQETQKAA 526          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7151.15973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7R8_9PHAE4.250e-20859.73ERCC4 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A836CKB8_9STRA1.250e-5540.88Restriction endonuclease type II-like protein n=1 ... [more]
A0A7S3XK47_HETAK1.570e-3034.77Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7R9UCP7_9STRA3.380e-2645.57Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9DDT9_9STRA1.770e-2331.77ERCC4 domain-containing protein n=2 Tax=Monodopsid... [more]
A0A8K1CQN6_PYTOL5.860e-2333.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067BND5_SAPPC6.310e-2334.46ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]
A0A1V9ZBA3_9STRA7.130e-2333.84Crossover junction endonuclease MUS81-like protein... [more]
UPI001ED821143.210e-2230.29crossover junction endonuclease MUS81 n=1 Tax=Scat... [more]
A0A067CHT1_SAPPC7.880e-2234.46ERCC4 domain-containing protein n=1 Tax=Saprolegni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006166ERCC4 domainSMARTSM00891ERCC4_2coord: 285..379
e-value: 3.3E-22
score: 89.8
IPR006166ERCC4 domainPFAMPF02732ERCC4coord: 288..419
e-value: 1.1E-23
score: 84.1
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 43..111
e-value: 1.5E-6
score: 30.2
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 59..102
NoneNo IPR availableGENE3D3.40.50.10130coord: 311..507
e-value: 2.1E-38
score: 134.0
NoneNo IPR availablePANTHERPTHR13451CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81coord: 118..533
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 282..424

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7151contigL-elsbetiae_contig7151:2952..8795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7151.15973.1mRNA_L-elsbetiae_contig7151.15973.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7151 2945..8795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7151.15973.1 ID=prot_L-elsbetiae_contig7151.15973.1|Name=mRNA_L-elsbetiae_contig7151.15973.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=610bp
MAGRGRGGGRFGGDRGWTARRGGGGSGGGGAGRGMVCACEANAPLLLELR
NFDEECLRTGKVKLRHGLKRAMRSLEKYPLPVTTEKEACALEGVGSFTAR
RMLRGLSMAVPAAGGNNGDSSSSNANSNSRRTGQDEENIEPSRTSSSSSA
AAATASGLARGRSRKSNSKSSSSSTCGSSSVAASGCCSSNNNAGSALRMN
LRPRHSRSHGRGAAAKTTGRPLSLASNFAALRGDVGDSGSGALTPDVTPK
RPTSRARREDVGEGAGLSGASSKAPRFFSGDWEAWLIVDNREHDFMSMQS
TLLQKGVRCETRQLPLGDMLWIARRKNDPTSEVLLGYIVERKTASDLASS
IVDGRYDEQKRRLRLSGLRRRIYLVEGNLSHQSQLAPSALRTALASSQAK
GGLAVVQCDSLRDSVEFLARTHRHVASLLLQACRSSCPSSSDSSLAGGGD
GGEGGLWRGGGLAENGGGGGLLRPAMTYGEYAQGCAKRAGATTVRKVLGA
MMRQVPGCSAARAEAVVREFDSPLGLMLALERAAEGGGSGDAGCERCHDD
AARMKRVDDLLAGLVCRGGAGTNKLPQPLRRLLCRLFVGESVDGPAGDGD
GKGYDGAGET
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006166ERCC4_domain
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR011335Restrct_endonuc-II-like