prot_L-elsbetiae_contig7146.15965.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7146.15965.1
Unique Nameprot_L-elsbetiae_contig7146.15965.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length128
Homology
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BLAST of mRNA_L-elsbetiae_contig7146.15965.1 vs. uniprot
Match: D8LLZ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ3_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.470e-72
Identity = 109/128 (85.16%), Postives = 118/128 (92.19%), Query Frame = 0 
Query:    1 ALAGTARPSARNLAETSIELAGTEKSRIAVSILYPKQWTVTKTPGKSINIQDMKYTDRAFSLAKPLPKGVKSVGDIPVSFFTDALFSLDGPYGTFGKVDDFKIVGTKTESKGKRDYRYIDLKFSAPTQ 128
            A AGTARPSARNLAETSIEL G+ +  IAVS+LYPKQWTVTKT GKSINIQDMKYTDRAFSLA PLP G KSVGDIP+SFFTDALFSLDGPYGTFGKVDDFK++G K+E+KGKRDYRY+DLKFSAPTQ
Sbjct:   70 ASAGTARPSARNLAETSIELNGSGQQPIAVSVLYPKQWTVTKTAGKSINIQDMKYTDRAFSLAMPLPSGTKSVGDIPLSFFTDALFSLDGPYGTFGKVDDFKVIGAKSEAKGKRDYRYVDLKFSAPTQ 197
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BLAST of mRNA_L-elsbetiae_contig7146.15965.1 vs. uniprot
Match: A0A7S0LSG3_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LSG3_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 1.030e-10
Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 0 
Query:   23 TEKSRIAVSILYPKQWTVTKTPGKSINIQDMKYTDRAFSLAKPLPKGVKSVGDIPVSFFTDALFSLDGPYGTFGKVDDFKIVGTKTE-----SKGKRDYRYIDLKFSAPT 127
            T      VS  +P  WT+   P  +I+++D++ +D AF L+  LP+G K+   +  SFF   +F   G YG++G VDD K++ +        S GK+ YR + LKFS  T
Sbjct:  107 TSSGSAEVSFAFPPAWTLAGGP--NIDVRDVRESDSAFLLSAKLPEG-KTFEQLHDSFFLSVVFDPQGKYGSYGTVDDRKVLSSDLAALTLPSGGKQTYRRLALKFSPLT 213
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7146.15965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLZ3_ECTSI1.470e-7285.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0LSG3_9EUKA1.030e-1035.45Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7146contigL-elsbetiae_contig7146:5596..8178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7146.15965.1mRNA_L-elsbetiae_contig7146.15965.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7146 5594..8178 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7146.15965.1 ID=prot_L-elsbetiae_contig7146.15965.1|Name=mRNA_L-elsbetiae_contig7146.15965.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp
ALAGTARPSARNLAETSIELAGTEKSRIAVSILYPKQWTVTKTPGKSINI
QDMKYTDRAFSLAKPLPKGVKSVGDIPVSFFTDALFSLDGPYGTFGKVDD
FKIVGTKTESKGKRDYRYIDLKFSAPTQ
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