prot_L-elsbetiae_contig713.15940.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig713.15940.1
Unique Nameprot_L-elsbetiae_contig713.15940.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
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BLAST of mRNA_L-elsbetiae_contig713.15940.1 vs. uniprot
Match: A0A6H5JTS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS8_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 5.210e-18
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0 
Query:   39 CLVALALSSPVAP-QCSG---LATAAVPITDCAGLEALPASIVEDLILSFDGVEAIVCDKLLTLTVGGGSELSVRL-------GAGGXXXXXXXXXXXXXSGSGLRLHGVRVVVEKGAKLTVGMAAQ-TDWGQG----GSALRTLTLEGAAQQ 175
            C++ALA+S+   P QC+     A   VPI+DCAGLEALP+ I +DL LSFD V AIVC+KL+TLTVGGG EL++ +       G GG             SG  LRL  VRV V+ GA L+VG+A   +  G G    G     LTLEG A Q
Sbjct:   10 CVLALAISTGAQPPQCTRPRRRAAGTVPISDCAGLEALPSLITQDLHLSFD-VGAIVCEKLVTLTVGGGIELAIHVSPGSTSEGLGGGEGEDEGCRDPPVSG--LRLRNVRVGVKSGAMLSVGVAGDISSDGMGYAGPGEGTSALTLEGVAPQ 159
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig713.15940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JTS8_9PHAE5.210e-1847.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig713contigL-elsbetiae_contig713:8750..13227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig713.15940.1mRNA_L-elsbetiae_contig713.15940.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig713 8749..13227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig713.15940.1 ID=prot_L-elsbetiae_contig713.15940.1|Name=mRNA_L-elsbetiae_contig713.15940.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
TYSCLAAWLPPPSGGGAPKNQQQRRKERHMWRCRRHRVCLVALALSSPVA
PQCSGLATAAVPITDCAGLEALPASIVEDLILSFDGVEAIVCDKLLTLTV
GGGSELSVRLGAGGGGSEDVVNANAGNSGSGLRLHGVRVVVEKGAKLTVG
MAAQTDWGQGGSALRTLTLEGAAQQ
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