mRNA_L-elsbetiae_contig7103.15916.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: D8LK16_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK16_ECTSI) HSP 1 Score: 347 bits (891), Expect = 7.760e-103 Identity = 162/172 (94.19%), Postives = 165/172 (95.93%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLTD 978 L RVIFMR WLK GQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKF+VMREDP+ VTEGPDDGIYCHGLWLEGARWDSDAWKLRES PGEMYMELPLIHFMPAAGHKTA WDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWV+FGVAALCNLTD Sbjct: 4125 LLFRVIFMRGWLKEGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFDVMREDPSDVTEGPDDGIYCHGLWLEGARWDSDAWKLRESHPGEMYMELPLIHFMPAAGHKTAEWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVMFGVAALCNLTD 4296
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A7S2V192_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V192_9STRA) HSP 1 Score: 270 bits (691), Expect = 2.950e-85 Identity = 126/173 (72.83%), Postives = 142/173 (82.08%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMRE-DPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLTD 978 L RV FMR WL GQP F LPVFFFPQGFMTGTLQT+ARKY VAIDTL +K+NV+ + +P + EGP+DG++C+GLWLEGARWD D L+ S PGEMYM+LP IHF PA HKTA DYACPVYKTA RKGVLSTTGMSTNFV+AVELPTD +PDVWVL+GVAALC LTD Sbjct: 57 LAHRVTFMRKWLVNGQPPAFDLPVFFFPQGFMTGTLQTYARKYMVAIDTLQFKYNVLNDCEPEDIVEGPEDGVFCYGLWLEGARWDHDEQLLQVSVPGEMYMQLPPIHFQPAVNHKTAPTDYACPVYKTAVRKGVLSTTGMSTNFVVAVELPTDQNPDVWVLYGVAALCCLTD 229
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A835ZBK4_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK4_9STRA) HSP 1 Score: 275 bits (704), Expect = 6.420e-78 Identity = 124/171 (72.51%), Postives = 145/171 (84.80%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLT 975 L RV FMR+WL+ GQPACFPLPVFFFPQGFMTGTLQTF+RKYQVAIDTL ++++++ EDP V GP+DG+ C+GLWLEGARW ++ +L+ S GEMY +LPLIHF PAAGHK A DY CPVYKTAERKGVLSTTGMSTNFV+A+ LPTD+SPD WVL+GVAAL NLT Sbjct: 4019 LVERVAFMRTWLQQGQPACFPLPVFFFPQGFMTGTLQTFSRKYQVAIDTLNFEYDILNEDPLQVESGPEDGVLCYGLWLEGARWHAETGRLQPSRQGEMYTQLPLIHFKPAAGHKPAPTDYQCPVYKTAERKGVLSTTGMSTNFVVAISLPTDLSPDTWVLYGVAALLNLT 4189
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A7S4D9T6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T6_HETAK) HSP 1 Score: 258 bits (660), Expect = 3.700e-72 Identity = 120/170 (70.59%), Postives = 137/170 (80.59%), Query Frame = 1 Query: 469 GRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLTD 978 GRV F R WL+ GQPA F LPVFFFPQGFMTGTLQTFARKY+VAIDTL++KF V+ + +TE PDDGI +GLW+EGARWD+DA ++ S PGEMY LP+IHF+P HK DYACP+YKTA RKGVLSTTGMSTNFVIAVELPT V PDVWVL+GVA LC L+D Sbjct: 1422 GRVAFFRKWLREGQPAAFELPVFFFPQGFMTGTLQTFARKYEVAIDTLSFKFEVLDREANTITEAPDDGIIVYGLWMEGARWDADARQMAISRPGEMYTPLPVIHFIPEVDHKQKPTDYACPIYKTAVRKGVLSTTGMSTNFVIAVELPTLVDPDVWVLYGVAGLCLLSD 1591
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A7S3XZW7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZW7_HETAK) HSP 1 Score: 258 bits (660), Expect = 3.710e-72 Identity = 120/170 (70.59%), Postives = 137/170 (80.59%), Query Frame = 1 Query: 469 GRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLTD 978 GRV F R WL+ GQPA F LPVFFFPQGFMTGTLQTFARKY+VAIDTL++KF V+ + +TE PDDGI +GLW+EGARWD+DA ++ S PGEMY LP+IHF+P HK DYACP+YKTA RKGVLSTTGMSTNFVIAVELPT V PDVWVL+GVA LC L+D Sbjct: 1429 GRVAFFRKWLREGQPAAFELPVFFFPQGFMTGTLQTFARKYEVAIDTLSFKFEVLDREANTITEAPDDGIIVYGLWMEGARWDADARQMAISRPGEMYTPLPVIHFIPEVDHKQKPTDYACPIYKTAVRKGVLSTTGMSTNFVIAVELPTLVDPDVWVLYGVAGLCLLSD 1598
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A7S1U3A9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3A9_9STRA) HSP 1 Score: 245 bits (626), Expect = 6.870e-68 Identity = 112/172 (65.12%), Postives = 133/172 (77.33%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLTD 978 L RV FM +WLK GQP FP+PVFFFPQGFMTGTLQT+ARKYQVAIDTL +K++V+ +TE PDDG++ +GLW+EGARWD++A K+ S PGEMY +P +HF P HK AA Y PVYKT RKGVLSTTGMSTNFV+ VELPTDV P+ WVL+G A LCNL+D Sbjct: 1016 LIFRVEFMCNWLKNGQPVAFPMPVFFFPQGFMTGTLQTYARKYQVAIDTLNFKYDVLETPAEDITEAPDDGVFVYGLWMEGARWDAEAKKMAISRPGEMYTPIPTVHFQPEVDHKVAADVYQLPVYKTDVRKGVLSTTGMSTNFVVPVELPTDVPPETWVLYGCAGLCNLSD 1187
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A8J2SJ49_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ49_9STRA) HSP 1 Score: 235 bits (600), Expect = 4.010e-64 Identity = 114/170 (67.06%), Postives = 131/170 (77.06%), Query Frame = 1 Query: 472 RVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMR-EDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNLTD 978 R+ FMR+WL G P FPLPVFFFPQGFMTGTLQTFARKY VAIDTL++KF + E+P E P+DG+ C G+ LEGA+WD DA + +S GEMY LP++HF+PA GH A YACP+YKTA RKGVLSTTGMSTNFV+AVELPT V PD WVL GVAAL NLTD Sbjct: 3883 RIEFMRTWLVNGLPVSFPLPVFFFPQGFMTGTLQTFARKYMVAIDTLSFKFGICGFEEPQ---EHPEDGVLCSGMMLEGAKWDPDAAMVVDSVLGEMYTPLPIVHFIPAVGHVIAPTSYACPIYKTAVRKGVLSTTGMSTNFVVAVELPTAVDPDTWVLAGVAALLNLTD 4049
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A7S3H4B5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4B5_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.970e-61 Identity = 108/174 (62.07%), Postives = 125/174 (71.84%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELP--TDVSPDVWVLFGVAALCNLTD 978 L RV FMR WL GQPA FPLPVFFFPQGFMT +LQTFARK+ AID L++KF ++ P + + P+DG+ GL+LEGAR+D + ESTPG MY LP IHF PA HK A YACPVYKTA RKGVLSTTGMSTN+V+ VELP D + W+L GVAALCNLTD Sbjct: 318 LVFRVKFMRQWLVQGQPAAFPLPVFFFPQGFMTASLQTFARKHMEAIDGLSFKFQILTVPPEQIVDAPEDGVIVFGLYLEGARFDQTQQLVVESTPGIMYDLLPAIHFKPAVNHKQAPSTYACPVYKTAVRKGVLSTTGMSTNYVVPVELPIRADETEQKWILAGVAALCNLTD 491
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A6A4ZU28_9STRA (Dynein_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZU28_9STRA) HSP 1 Score: 210 bits (535), Expect = 3.030e-60 Identity = 101/170 (59.41%), Postives = 118/170 (69.41%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNL 972 L RV F R+WL G+P FPLP FFFPQGFMTGTLQ FARKYQ AID L + F VM ++T P DGIY GLWLEGARW++ L E+ PGEM+ + L+HF+PAA +Y CPVYKT+ RKG LSTTGMSTNFV+AV LP+ +PD WVL G A L NL Sbjct: 189 LLNRVAFFRTWLVQGEPVIFPLPAFFFPQGFMTGTLQNFARKYQTAIDCLGFTFAVMECQADSITSSPSDGIYVDGLWLEGARWNAKDKSLEEARPGEMFSPMSLVHFLPAANIDRNKDEYPCPVYKTSVRKGTLSTTGMSTNFVVAVYLPSTKTPDHWVLNGAAFLLNL 358
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Match: A0A1V9YA21_9STRA (Dynein heavy chain n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA21_9STRA) HSP 1 Score: 215 bits (547), Expect = 4.050e-57 Identity = 105/170 (61.76%), Postives = 119/170 (70.00%), Query Frame = 1 Query: 463 LCGRVIFMRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMREDPTAVTEGPDDGIYCHGLWLEGARWDSDAWKLRESTPGEMYMELPLIHFMPAAGHKTAAWDYACPVYKTAERKGVLSTTGMSTNFVIAVELPTDVSPDVWVLFGVAALCNL 972 L GRV F R WL G+P FPLP FFFPQGFMTGTLQ FARKYQ AID L + F V+ TAV E P DGIY GLWLEGARW++ L E+ PGEM+ + L+HF+PAA +Y CPVYKT+ RKG LSTTGMSTNFV+AV LPT +PD WVL G A L NL Sbjct: 3806 LLGRVDFFRRWLVHGEPVVFPLPAFFFPQGFMTGTLQNFARKYQTAIDCLGFTFAVLDVPATAVRESPSDGIYVDGLWLEGARWNAKKRSLEEARPGEMFSPMALVHFLPAANIMRKKEEYPCPVYKTSVRKGTLSTTGMSTNFVVAVYLPTRHNPDHWVLNGAAFLLNL 3975 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7103.15916.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7103.15916.1 >prot_L-elsbetiae_contig7103.15916.1 ID=prot_L-elsbetiae_contig7103.15916.1|Name=mRNA_L-elsbetiae_contig7103.15916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MRSWLKGGQPACFPLPVFFFPQGFMTGTLQTFARKYQVAIDTLTYKFNVMback to top mRNA from alignment at L-elsbetiae_contig7103:7719..10237- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7103.15916.1 ID=mRNA_L-elsbetiae_contig7103.15916.1|Name=mRNA_L-elsbetiae_contig7103.15916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2519bp|location=Sequence derived from alignment at L-elsbetiae_contig7103:7719..10237- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7103:7719..10237- >mRNA_L-elsbetiae_contig7103.15916.1 ID=mRNA_L-elsbetiae_contig7103.15916.1|Name=mRNA_L-elsbetiae_contig7103.15916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig7103:7719..10237- (Laminarionema elsbetiae ELsaHSoW15)back to top |