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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-05_005850.1 |
| Exons | 2 |
| Model size | 614 |
| Cds size | 612 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816788.30787-CDS-L-elsbetiae_contig710:17941..17971 | 1622816788.30787-CDS-L-elsbetiae_contig710:17941..17971 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig710 17942..17971 + |
| 1691683814.001625-CDS-L-elsbetiae_contig710:17941..17971 | 1691683814.001625-CDS-L-elsbetiae_contig710:17941..17971 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig710 17942..17971 + |
| 1622816788.3225033-CDS-L-elsbetiae_contig710:18835..19417 | 1622816788.3225033-CDS-L-elsbetiae_contig710:18835..19417 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig710 18836..19417 + |
| 1691683814.0127735-CDS-L-elsbetiae_contig710:18835..19417 | 1691683814.0127735-CDS-L-elsbetiae_contig710:18835..19417 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig710 18836..19417 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig710.15910.1 >prot_L-elsbetiae_contig710.15910.1 ID=prot_L-elsbetiae_contig710.15910.1|Name=mRNA_L-elsbetiae_contig710.15910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp
GRQGGIPIEQGKMNGDPYEPVDDGQRHRYHSSQPPETANASRYSPMLPFS
GSSHLGVPGAPATAPSGDDSNYHHLQQSSAGLAPPHARDSLPRDNGHHQE
HRHTPQNSTGIRDGSSPMSLALSMPSPVGGGVFTPTAPHDVQGQEEYRFQ
RQQQQSDPMIPTILAHSLMGGADDACYSPGVAAQHHGQERPSQHHQQQQQ
QQSA back to topmRNA from alignment at L-elsbetiae_contig710:17942..19417+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig710.15910.1 ID=mRNA_L-elsbetiae_contig710.15910.1|Name=mRNA_L-elsbetiae_contig710.15910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1476bp|location=Sequence derived from alignment at L-elsbetiae_contig710:17942..19417+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAGGCAAGGGGGCATTCCCATCGAACAGGTGGGAGAGTGAGCTTGACA
TATATAATGAGTAGCGAGAACATTGGAGGAAGAGGGTAGAGCACATGCGG
TATACGCGAAGAGCCGAATCGGGCGTGAACGAGTTGCGCCTCCTGAGTTA
CATACATACACGCAGAGAGGGAGTTCTATCGGGGGCCGCTTGGGTTCTTA
GGTGCACACCGCCCGGTGATGGGCTTAAATACAAAGCCATGTTCCGGGCC
GGGCGTCCCGCCAACAAGAAGAGCTACCCGGTTCAGCCAAAGTGCGGTAT
TGTAGGCCTTCGAATCGAAATTCGTCAGCTCTCTTCATCTTTCGTATATG
TTGTGTGCATATAACCTCCAAGATGTTGTTCACATGATGCGCTGTGCGGG
TCACTGAGACTTTCACAGCAGGCCGGTTTGAAGAATACGGTCGTGCTCTC
AGGTTTAAGTTCGCTCGCCCATTGGCGGATCATCTCAAATATGTGAGCAA
ACAAGGTTACCACCCACATTTATAAACTTTGACTTTTCCTTCTATTCGTA
CATATATCTGGACACTCTTGCTTATCAGCACTAATAACGATCCCATTAGC
TTCTCACACGACCATAAATTGTGGCATCAGCCGTGCATGCTTGTGCTTGG
CCCAAAGCATGGTCACACTTTGACACCAAATTCCGGTTTATTATTTCAGT
GAACTCCTGTCGAACTTGTGAACATCCTTCTCACACTGCACTTTTAAGTT
CACTCGGAAGCGAAGAAATTAGATATACTATCAGTTCAGCTGCAGCTGAC
TGGGGGTAGAGGAATCGCAGTAGAACCCTCGCCTTGGGGATAGCTACTGC
GTCAAGAGAAAAATTTCTCAATCTTTTCCGTGCCTCGACTCCAGGGCAAG
ATGAACGGTGACCCTTACGAGCCAGTTGACGACGGCCAGCGCCACCGTTA
CCATTCCAGTCAACCTCCAGAGACCGCCAATGCCTCGAGGTACTCCCCCA
TGCTCCCCTTCAGCGGTAGCTCCCACCTGGGAGTGCCAGGGGCGCCAGCG
ACAGCTCCGTCCGGAGACGACAGCAACTACCACCACCTTCAACAATCTTC
GGCGGGGCTGGCACCACCGCATGCTAGAGACTCGTTGCCCCGAGACAACG
GGCACCACCAAGAGCACCGCCACACGCCGCAGAACTCAACCGGCATCCGC
GACGGGAGCAGCCCGATGAGTCTGGCGCTGAGCATGCCCTCGCCGGTCGG
CGGCGGTGTTTTCACACCCACGGCGCCGCATGATGTACAAGGGCAAGAAG
AGTACCGCTTCCAGCGGCAGCAGCAACAATCGGACCCCATGATCCCAACG
ATCCTCGCCCACTCTCTTATGGGCGGCGCCGACGATGCTTGCTACTCCCC
CGGTGTGGCAGCACAGCACCACGGACAGGAGCGACCTTCGCAGCACCATC
AGCAGCAGCAGCAGCAGCAGTCGGCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig710:17942..19417+ >mRNA_L-elsbetiae_contig710.15910.1 ID=mRNA_L-elsbetiae_contig710.15910.1|Name=mRNA_L-elsbetiae_contig710.15910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig710:17942..19417+ (Laminarionema elsbetiae ELsaHSoW15)
GGCAGGCAAGGGGGCATTCCCATCGAACAGGGCAGGCAAGGGGGCATTCC
CATCGAACAGGGCAAGATGAACGGTGACCCTTACGAGCCAGTTGACGACG
GCCAGCGCCACCGTTACCATTCCAGTCAACCTCCAGAGACCGCCAATGCC
TCGAGGTACTCCCCCATGCTCCCCTTCAGCGGTAGCTCCCACCTGGGAGT
GCCAGGGGCGCCAGCGACAGCTCCGTCCGGAGACGACAGCAACTACCACC
ACCTTCAACAATCTTCGGCGGGGCTGGCACCACCGCATGCTAGAGACTCG
TTGCCCCGAGACAACGGGCACCACCAAGAGCACCGCCACACGCCGCAGAA
CTCAACCGGCATCCGCGACGGGAGCAGCCCGATGAGTCTGGCGCTGAGCA
TGCCCTCGCCGGTCGGCGGCGGTGTTTTCACACCCACGGCGCCGCATGAT
GTACAAGGGCAAGAAGAGTACCGCTTCCAGCGGCAGCAGCAACAATCGGA
CCCCATGATCCCAACGATCCTCGCCCACTCTCTTATGGGCGGCGCCGACG
ATGCTTGCTACTCCCCCGGTGTGGCAGCACAGCACCACGGACAGGAGCGA
CCTTCGCAGCACCATCAGCAGCAGCAGCAGCAGCAGTCGGCCGGCAAGAT
GAACGGTGACCCTTACGAGCCAGTTGACGACGGCCAGCGCCACCGTTACC
ATTCCAGTCAACCTCCAGAGACCGCCAATGCCTCGAGGTACTCCCCCATG
CTCCCCTTCAGCGGTAGCTCCCACCTGGGAGTGCCAGGGGCGCCAGCGAC
AGCTCCGTCCGGAGACGACAGCAACTACCACCACCTTCAACAATCTTCGG
CGGGGCTGGCACCACCGCATGCTAGAGACTCGTTGCCCCGAGACAACGGG
CACCACCAAGAGCACCGCCACACGCCGCAGAACTCAACCGGCATCCGCGA
CGGGAGCAGCCCGATGAGTCTGGCGCTGAGCATGCCCTCGCCGGTCGGCG
GCGGTGTTTTCACACCCACGGCGCCGCATGATGTACAAGGGCAAGAAGAG
TACCGCTTCCAGCGGCAGCAGCAACAATCGGACCCCATGATCCCAACGAT
CCTCGCCCACTCTCTTATGGGCGGCGCCGACGATGCTTGCTACTCCCCCG
GTGTGGCAGCACAGCACCACGGACAGGAGCGACCTTCGCAGCACCATCAG
CAGCAGCAGCAGCAGCAGTCGGCC back to top
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