prot_L-elsbetiae_contig71.15906.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig71.15906.1
Unique Nameprot_L-elsbetiae_contig71.15906.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
BLAST of mRNA_L-elsbetiae_contig71.15906.1 vs. uniprot
Match: D7FRB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB2_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 7.520e-57
Identity = 97/130 (74.62%), Postives = 110/130 (84.62%), Query Frame = 0
Query:    1 MTINAVVSVLFKHETEAVEAAAAVLEQRRTSGDWRLTKEEESAVTNRVYGVANSLTELRFMLATAVRRTPSIAKYGMLSDYGMSDDVEDNPLAQMNQAECLLALYMLHKEKLGVAAVDFLDADRLDVLKG 130
            + INA+VSVLFK +TEA  AAAA LE+R    DW  T+EEE AVT+RV GVA+ LTELRFMLATAV RTPSIAKYGM SDYGMS++VE++PLAQMNQAECLLALY+LHKE  G AAVDFLDA+RLDVL G
Sbjct:    4 LVINALVSVLFKPDTEATGAAAAALERR---SDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLAG 130          
BLAST of mRNA_L-elsbetiae_contig71.15906.1 vs. uniprot
Match: A0A6H5JXH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH9_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 6.120e-56
Identity = 97/130 (74.62%), Postives = 111/130 (85.38%), Query Frame = 0
Query:    1 MTINAVVSVLFKHETEAVEAAAAVLEQRRTSGDWRLTKEEESAVTNRVYGVANSLTELRFMLATAVRRTPSIAKYGMLSDYGMSDDVEDNPLAQMNQAECLLALYMLHKEKLGVAAVDFLDADRLDVLKG 130
            + INA+VSVLF+ +TEA  AAAA LE+R    DW  T+EEE AVT+RV GVA+ LTELRFMLATAV RTPSIAKYGM SDYGMS +VE++PLAQMNQAECLLALY+LHKE  GVAAVDFLDA+RLDVL+G
Sbjct:  121 LVINALVSVLFRPDTEATGAAAAALERR---SDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSKNVENDPLAQMNQAECLLALYILHKENAGVAAVDFLDAERLDVLQG 247          
BLAST of mRNA_L-elsbetiae_contig71.15906.1 vs. uniprot
Match: A0A835ZBX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.540e-33
Identity = 72/130 (55.38%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    1 MTINAVVSVLFKHETEAVEAAAAVLEQRRTSGDWRLTKEEESAVTNRVYGVANSLTELRFMLATAVRRTPSIAKYGMLSDYGMSDDVEDNPLAQMNQAECLLALYMLHKEKLGVAAVDFLDADRLDVLKG 130
            + INA+  VLFK E    +AA + L Q R   D  LT EE++ V +RV+GV +S  ELRF LA+AV R   IAKYGM  DYG+S+D+E NPLAQ+N AECLLALYMLH+E  G     F+DA++LDVL+G
Sbjct:   54 LVINALQRVLFKDEP--ADAAVSALLQSR---DDALTPEEDALVRSRVHGVVHSAQELRFTLASAVSRHAFIAKYGMQGDYGVSEDLESNPLAQLNHAECLLALYMLHREGRGEEPA-FVDAEKLDVLRG 177          
BLAST of mRNA_L-elsbetiae_contig71.15906.1 vs. uniprot
Match: K0T9B3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9B3_THAOC)

HSP 1 Score: 58.9 bits (141), Expect = 1.110e-7
Identity = 40/118 (33.90%), Postives = 60/118 (50.85%), Query Frame = 0
Query:   36 LTKEEESAVTNRVYGVANSLTELRFMLATAVRRTPSIAKYGMLSDYGM---------------SDDVEDNPLAQMNQAECLLALYMLHKEKLGV----------AAVDFLDADRLDVL 128
            L   E+  V+ RV GV   L EL  +L   V+    ++KYG    +G+               ++ ++ NPL +MN+AECLLAL++   EK  +          + VDF+DADRL+VL
Sbjct:  163 LDTSEQQTVSGRVVGVVMRLPELESLLVDKVKGVGWVSKYGEEESFGLLRSEVKDSEGDSGQLAEQLQLNPLLRMNRAECLLALFIDTVEKPQLERIGQRVPDSSRVDFIDADRLEVL 280          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig71.15906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FRB2_ECTSI7.520e-5774.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXH9_9PHAE6.120e-5674.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZBX3_9STRA6.540e-3355.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0T9B3_THAOC1.110e-733.90Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig71contigL-elsbetiae_contig71:40696..42864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig71.15906.1mRNA_L-elsbetiae_contig71.15906.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig71 40464..43459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig71.15906.1 ID=prot_L-elsbetiae_contig71.15906.1|Name=mRNA_L-elsbetiae_contig71.15906.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MTINAVVSVLFKHETEAVEAAAAVLEQRRTSGDWRLTKEEESAVTNRVYG
VANSLTELRFMLATAVRRTPSIAKYGMLSDYGMSDDVEDNPLAQMNQAEC
LLALYMLHKEKLGVAAVDFLDADRLDVLKG*
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