mRNA_L-elsbetiae_contig71.15902.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig71.15902.1
Unique NamemRNA_L-elsbetiae_contig71.15902.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: D7FRB7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRB7_ECTSI)

HSP 1 Score: 1427 bits (3695), Expect = 0.000e+0
Identity = 907/1278 (70.97%), Postives = 975/1278 (76.29%), Query Frame = 2 
Query:  179 KVVELVNKAKVEAKEQKTYLLAQVKEICFNRDTSLLEEVIPMVTEFQTDFNANCRKWVASFLRDVVRSHPEHVGLVVPVASFLMHDSNTNVKKVAVLLANTTYRPALQRLVDNGSMEGAQQDWSVLEGLRKAVLNTITSGPADISMVAVKFAESVVLACVGGRGLAPGSSREGDKSVQRDLSPSHPFLLADTLDQAGHALARQMVGWLGNSGAGASXXXXXXXGTGWGLGFGAQHYTVLINALQNLATNRAALFADIVPALATALESVNGGGRADGRGADGPKNPAAPKGLQDAASSLRSACLRLLKVAPVASKSVQRLATAAALSGSDGEAKAAVDGNSALRGRIKLPARSRERXXXXXXXXXXXXXXXXRVMALTVENRRDLAALA-SSASLGKMPKPPP-GYKQNRTKGFPLPDLDTLFGHVLNALGPEIATAKNQTPSEGSG-ANGGESLGSKRAR-DPAADEGGGKRRSGENANGGGVKSDGASSGQGRSPMEVDSAAGRDDAKTKKSKPGAAASSEVEPESGP-------------------------------PSDPVREGLEVSKKAYSRVLGVWEGVAMEGQRGLHQRVVARLGRMLAEAEAAALAQESKASESEMVVVEAMGFMAKDYRKRFQAALALLTDIYVADVAAXXXXXXXXXXXXXXKGKS-TKRAAKLPKARGFDLYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLCDMAAQPHDVQTGECEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRPKVETREED--LVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAKGATYTPPELVVLLNQSDARVPIKSMTRALTLCLENKAVYNYPVLREALNVMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEALAHPLMKGVKEPLRRYAQTLVKVDPGVRAVLGMDSGAREAPVKK 3898
            +VV+L+NKAKVEAKEQK +LLAQVKEICFNRD SLL EVIPMV EFQTDFNANCRK+VASFLR+VVRSHPEHVGLVVPVASFLMHDSNT+VKKVA+LLANTTYRPALQRLVDNGS++GAQQDWSVLEGLRKAVLNTI SGPADISMVA+KFAESVVLACVGGRGL P +SR GDKSVQRDLSPSHPFLLADTLDQAGHALARQMVGWLGN      XXXXXXX       FGAQHY++LINALQNLATNRAALFADIVPALA                                                                        AVDGNS LRGRIKLPAR RER                   ALT  NRRD+A LA SSAS GKMP PPP GYKQNRTKGFPL DLDTL GHVLNALGPE+ATAKN+ P E SG ++G E++GSKRAR   + DEGGGKRRSG+    G  ++  A     RS MEVD+      AK  +   G A     E  + P                               PSDP REGLE SKKA+ RVLGVWEGVAMEG+RGLHQ VVARLGRMLAE+EA ALA+ +K SESEMVV E + FM KDYRKRF+AALALLTD+YVADVAAXXXXXXXXXXXXXX GK+ ++RAA     RGFDLYD ALL LLT LSGSLE TWRQKLFTQTLLECPRVP AALELVCTLCD+AA PHDVQTG    LVALKDLIFHKPATR VCIPSVLRFTHHSDNDVRTKAVRL +NLLWKDPAFQ  IE FAKQALASVRPPEV KVE K                      L+DF     XXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXX   V   GPW APPDTAA ARVRLSLYFALCVKSRPMLSGLLEAYVTA PAA++GLKAELPLLARAAA+GFGEAGVVGLVAA+PV AK L L+MLDLLVPR+TNKPSPE+VAAVRRLR+TRL   A+ E   + E  +VG   DE +A +G+EYIVPILGGLGREGVMAELPALLQA D V+RAAFRRLTQPAKGATY P ELVV+LNQSDARVPIK++TRAL+LCLENKAVYNYPVLREALNVMSQVP A Q GGG KQIPLLLMRTV+ SV  FPELKNFVATVVLVRLVQ QVWTSDGLWKGFLRCA+MMAKESGATSFIAMVQLP+K LKEALA+PLMKG+KEPLRRYAQTLVKVDPGVRAVLGM++GAREA  KK
Sbjct:    7 RVVDLINKAKVEAKEQKIHLLAQVKEICFNRDRSLLPEVIPMVAEFQTDFNANCRKFVASFLREVVRSHPEHVGLVVPVASFLMHDSNTSVKKVAILLANTTYRPALQRLVDNGSVKGAQQDWSVLEGLRKAVLNTINSGPADISMVAIKFAESVVLACVGGRGLGPTASRGGDKSVQRDLSPSHPFLLADTLDQAGHALARQMVGWLGNGXXXXXXXXXXXXXXX--ASFGAQHYSLLINALQNLATNRAALFADIVPALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXXAVDGNSTLRGRIKLPARPRERPKAARA-------------ALTARNRRDVAELATSSASKGKMPHPPPPGYKQNRTKGFPLGDLDTLLGHVLNALGPELATAKNRPPPEDSGGSSGAEAVGSKRARGSTSGDEGGGKRRSGD----GSARAVSAPEPV-RSTMEVDTVDKGGGAKQPQKVLGGAGGKREEARAAPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSDPGREGLETSKKAFRRVLGVWEGVAMEGKRGLHQGVVARLGRMLAESEATALAKGAKTSESEMVVAEVVEFMTKDYRKRFKAALALLTDMYVADVAAXXXXXXXXXXXXXXXGKAISRRAAAKKPPRGFDLYDGALLRLLTALSGSLEATWRQKLFTQTLLECPRVPPAALELVCTLCDIAAHPHDVQTG----LVALKDLIFHKPATRGVCIPSVLRFTHHSDNDVRTKAVRLTSNLLWKDPAFQTTIETFAKQALASVRPPEVNKVEKKXXXXXXXXXXXXXXXXXXXXXXLLDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPXXXXGG-VPPAGPWLAPPDTAAAARVRLSLYFALCVKSRPMLSGLLEAYVTAIPAAKDGLKAELPLLARAAAKGFGEAGVVGLVAASPVGAKPLALLMLDLLVPRDTNKPSPEMVAAVRRLRETRLLAEAEAEAVVKEEEEEVGK-VDEPSAATGVEYIVPILGGLGREGVMAELPALLQASDGVIRAAFRRLTQPAKGATYKPAELVVVLNQSDARVPIKNLTRALSLCLENKAVYNYPVLREALNVMSQVPTAGQNGGGVKQIPLLLMRTVMVSVATFPELKNFVATVVLVRLVQQQVWTSDGLWKGFLRCAKMMAKESGATSFIAMVQLPEKKLKEALANPLMKGLKEPLRRYAQTLVKVDPGVRAVLGMETGAREAATKK 1254
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A835YPU9_9STRA (Symplekin tight junction protein C terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU9_9STRA)

HSP 1 Score: 191 bits (486), Expect = 4.670e-51
Identity = 116/243 (47.74%), Postives = 153/243 (62.96%), Query Frame = 2 
Query: 3167 AKVGGGAD----EVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAKGATYTPPELVVLL---NQSDARVPIKSMTRALTLCLENKAVYNYPVLREALNVMSQV---PAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEALAHPLMKGVKEPLRRYAQTLVKVDPGVRAVLGM 3865
            A  GGGA     E     G+E++VP+LGGL  E   A LP +L+A   VV AAF RLT P      TP  L+V L   N +   VP+K +T A+  CLENKAV++  V+REAL+ MS+    P AD  G G + +PLL MRTV+ +VQ +PELK ++A  +L RLVQ +VWT    W GF+R A++M  E+GATSFIA++ LP   L+E L     KG+KE L+ YA  ++KVDP V+ VLGM
Sbjct:   28 APAGGGAKPEKGERRGDRGVEFVVPVLGGLAAEERDALLPQVLRALRPVVDAAFHRLTSPRAAPPVTPVGLLVTLHNFNIAATGVPMKKLTDAVGYCLENKAVFSSHVMREALDTMSKAAAEPGAD--GKGKRGLPLLFMRTVILAVQGYPELKQYIAVTLLPRLVQQEVWTQPRAWDGFVRIAKIMGTETGATSFIALMLLPAPQLREVLK--THKGIKELLKSYAAGVIKVDPAVKEVLGM 266
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A6P5GCT6_ANACO (uncharacterized protein LOC109722179 isoform X1 n=6 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GCT6_ANACO)

HSP 1 Score: 152 bits (384), Expect = 2.110e-33
Identity = 152/558 (27.24%), Postives = 253/558 (45.34%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLC-DMAAQPHDVQTGE----CEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVE-TKVEEVKPPSPIRPKVET-----REEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVVLL---NQSDARVPIKSMTRALTLCLENKAVYNYPVLREALN-VMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEAL 3769
            LY++ LLSL   L  S   +   K F + L E P +P + L+L+  LC +M ++ H  +  +     +GL A+  LI  +P +R  C+   L+   HS ++VRTK++RL AN L+        IE FA   L SV    V + + T V   +P +      ET     +  + + FE D                                        ++     +P  + + A+ + SL+FALC K   +L  + + Y  +  A ++ +   +P+L R+   G     ++ +++  P   + L+++ L+ L   E + PS +L+A V+RL +T+L + A                            ++P+L  L +E V+   P L+    D  +AA  R+ Q +   G   TP E+++ +   N    RV +K +T   T C E + V+   VL  +LN ++ +VP           +PLL MRTV+++V  FP L +FV  + L +LV  Q+W    LW GFL+CA     ++   SF A++QLP   L+ AL
Sbjct:  738 LYEKFLLSLAKALVDSFPAS--DKSFNRLLGEAPFLPDSVLKLLEDLCVNMHSREHHAKDSDGDRITQGLGAVWSLILGRPLSRQACLNIALKCAVHSQDEVRTKSIRLVANKLYPLHYASEHIEQFATNMLLSVVDQRVSETDDTSVSSREPKTEAGGIQETSISSSQNSEPIRFESD----------------------------------------SMKSSLVSPSVSLSQAQCQTSLFFALCSKKPSLLRLVFDIYGRSPKAVKQCIHRHIPILVRSL--GASNTELLNIISDLPDGGENLIILTLETLT--EDSTPSKDLIATVKRLYETKLKDAA---------------------------ILIPLLSSLSKEEVLPIFPRLVDLPLDKFQAALARILQGSAHTGPALTPAEVLIAIHDINPEKDRVALKKITDVCTACFEQRTVFTQQVLASSLNQLVEKVP-----------LPLLFMRTVIQAVDAFPTLVDFVMGI-LSKLVSKQIWRMPKLWVGFLKCAY----QTQPHSFNALLQLPSPQLENAL 1206
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A251S520_HELAN (Putative HEAT repeat-containing protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S520_HELAN)

HSP 1 Score: 151 bits (381), Expect = 5.070e-33
Identity = 147/566 (25.97%), Postives = 254/566 (44.88%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLCDMAAQPHDVQTGEC--EGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVVLLNQSDAR---VPIKSMTRALTLCLENKAVYNYPVLREALN-VMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEAL-AHPLMKGVKEPLRRYA 3817
            +Y+  LL +   L  S  P+   K  ++ L E P +P + ++L+  LC +     +V +G+   +GL  +  LI H+P TR  C+   L+   H   +V+TKA+RL AN L+  P+    IE FAK  L S         +T V++    S     ++T+ E  +   V                                       + N+      P  +   A+  +SLYFALC K   +   LL  Y   + AA++ +  ++P L R        + ++ ++A  P  ++ L++ ++  L   +   PSPEL+A +++L DT+L +                            E ++P+L  L ++ V+      +    D  +AA  R  Q +   GA  TP E+++ ++  D     +P+K +T A   C + + ++   VL + LN ++ Q+P           +P+L MRTV++++  FP L +F+  + L RLV  Q+W +  LW GFL+CA++   +S    F  ++QLP   L+ AL   P++K    PL  YA
Sbjct:  731 VYEMFLLKVAEALRDSFPPS--DKSLSRLLNEVPYLPKSVVKLLEWLC-VPGNSEEVHSGDRVHQGLSIVWSLILHRPPTRDACLKIALQSAVHHLEEVQTKAIRLVANKLYPMPSISQQIEDFAKDMLLSAM-----NADTSVDDG---SNTELAMDTQMEKPMTESVS---------------------------ANTKDGSSEGTSENI------PSSSVTDAQRCMSLYFALCTKKHSLFRQLLVVYKNMSKAAKQAISVQIPKLVRTIG---SSSQLLEIIADPPAGSENLLMQVVQTLT--DGAIPSPELIATIKKLYDTKLKDA---------------------------EILIPVLPFLPKDEVLQMFSCFVNLPLDKFQAALARTLQESSEGGAGLTPAEVLIAIHGIDPDKDGIPLKKVTDACNTCFQQRQIFTQQVLAKVLNQLVEQIP-----------LPMLFMRTVIQTIGAFPALVDFIMEI-LSRLVSKQIWKNQKLWVGFLKCAQLTKPQS----FTVLLQLPPAQLEIALNKQPVLKA---PLASYA 1201
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A2U1QKL7_ARTAN (HEAT repeat-containing protein n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QKL7_ARTAN)

HSP 1 Score: 151 bits (381), Expect = 5.410e-33
Identity = 153/582 (26.29%), Postives = 249/582 (42.78%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLCDMAAQPHDVQ--TGEC--EGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAKGAT--YTPPELVVLLNQSDAR---VPIKSMTRALTLCLENKAVYNYPVLREALN-VMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEAL-AHPLMKGVKEPLRRYAQTLVKVDPGVRAVL 3859
            +Y+  LL +  TL  S  P    K  T+ L E P +P   L+L+ +LC       D +  +GE   +GL  +  LI  +P TR VC+   L+   H   +V+TKA+RL AN L+  PA    IE FAK  L S                             ++ L+D +                                        T N       P  +   A+  +SLYFALC K   +   LL  Y   + AA++ +  ++P L R          ++ ++A  P  ++ L++ ++  L   +   PSP L+A +R+L DTRL +                            E ++PIL  L ++ ++   P  +    D  +AA  R+ Q +       TP E+++ ++  D     +P+K +T A   C + + ++   VL + LN ++ Q+P           +P+L MRTV++++  FP L +F+  + L RLV  Q+W +  LW GFL+CA++   +S    F  ++QLP   L+ AL   P++KG   PL  YA       P +R+ L
Sbjct:  774 VYEMFLLKVAETLRDSFPPN--DKSLTRLLSEVPYLPKPVLKLLESLCVPGNSEKDAELHSGERVHQGLSIVWSLILLRPPTRDVCLKIALQSAVHHLEEVQTKAIRLVANRLYPIPAISQQIEDFAKDMLLSA--------------------------VNDDHLMDTD-----GSNAEVAKDNEMGKPLTESVSAIIKDSSSEAGQPSTSN-----NNPSTSIIDAQRCMSLYFALCTKKHSLFRQLLIVYKNMSKAAKQAISVQIPKLVRTIG---ASPQLLEIIADPPAGSENLLMQVVQTLT--DGAVPSPNLIATIRKLYDTRLRDT---------------------------EILIPILPFLPKDELLQIFPRFVNLPSDKFQAALARILQESSQGVSILTPAEVLIGIHGIDPEKDGIPLKKVTDACNTCFQQRQIFTQQVLAKVLNQLVEQIP-----------LPMLFMRTVIQTIGAFPALVDFIMEI-LSRLVSKQIWKNQKLWVGFLKCAQLTKPQS----FGVLLQLPPAQLEIALNKQPVLKG---PLVSYAS-----QPDIRSSL 1261
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: UPI001FB0A777 (uncharacterized protein LOC124929488 isoform X1 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0A777)

HSP 1 Score: 144 bits (364), Expect = 5.230e-31
Identity = 147/578 (25.43%), Postives = 250/578 (43.25%), Query Frame = 2 
Query: 2144 DLYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLCDMAAQPHDVQTGE--CEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVVLLN----QSDARVPIKSMTRALTLCLENKAVYNYPVLREALNVMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEALAHPLMKGVKEPLRRYAQTLVKVDPGVRA 3853
            ++Y++ LL L  +L  +L      K F++ L E P +  ++L+L+  LC  + Q   +  G+   +GL A+  LI  +P  R  C+   L+ T HS +D+RTKA+RL  N L+        IE FA     S        V    +E+ P            E+  D E                                             GP     D+ A A   +SL+FALC K   ++  L + Y  A  A ++ +   +P+L R       E  ++ +V+  P  ++ L++ +L +L   E +KPSP+L+  V++L +T++ + +                            ++P+L    +E V+  +P L+    +  + A   + Q +   G   TP E++V ++    + D+ + +K +T A T C E + V+   VL +ALN M +             +PLL MRT+++++  FP L +F+  + L +LV  Q+W    LW GFL+C      ++   SF  ++QLP   L+ AL       ++ PL  YA       PGVR+
Sbjct:  798 EIYEKFLLGLAKSLLDTLPAN--DKSFSRLLGEVPFLSDSSLKLLDDLCSSSYQSSSLHEGDRVTQGLGAVWSLILGRPPNRQACLNIALKCTVHSQDDIRTKAIRLVTNKLYVLSYISENIERFATDMFLSAIDQRTS-VSESCKEICP------------ENKPDRE--------------------QGGKVTSVSGSQFSEPGKSVKGEQAGPESESSDSFAEAHRLISLFFALCTKKPSLIQLLFKNYAQATRAVKQVVHRHIPVLVRTLGSSCSE--LLHIVSDPPEGSENLLIQVLQIL--SEGSKPSPDLINTVKQLYETKIKDAS---------------------------ILIPVLSSFSKEEVLPIIPCLVDLPLEKFQTALAHILQGSAHTGPALTPAEVLVAIHDITPEKDS-LALKKITDACTACFEQRTVFTQQVLAKALNQMVE----------QSPLPLLFMRTIIQAINAFPTLVDFIMEI-LSKLVTRQIWRLPKLWVGFLKCV----SQTQPHSFPVLLQLPVAPLENALNK--YSNLRGPLVSYAN-----QPGVRS 1286
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A5N5NNM0_9ROSI (Uncharacterized protein n=16 Tax=Saliceae TaxID=238069 RepID=A0A5N5NNM0_9ROSI)

HSP 1 Score: 140 bits (353), Expect = 1.150e-29
Identity = 148/588 (25.17%), Postives = 254/588 (43.20%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLCD---MAAQPHDVQTGE--CEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRP-KVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVR--LSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVVLLNQSDAR---VPIKSMTRALTLCLENKAVYNYPVLREALNVM-SQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEAL-AHPLMKGVKEPLRRYAQTLVKVDPGVRAVLGM 3865
            LY++ LL++  +L  +   +   K F++ L E P +P +A +L+  LC      +   +V  GE   +GL A+  LI  +P  R   +   L+   HS +D+R+KA+RL AN L++       IE FA   L S        VE +  ++ P   +   +V ++E  +   +V E                                     ++    P      T +   V+  +SL+FALC K+  +L  + + Y  A    ++ +   +P+L RA    + E  ++ +++  P   + L++++L +L    T  PS  L+  V+ L +T+L +                              ++PIL  L +  V+   P L+    +  + A   + Q +   G   TP E++V ++        +P+K +T A + C E + V+   VL +ALN M  Q P           +PLL MRTV++++  FP L +FV  + L +LV  QVW    LW GFL+C      ++   SF  ++QLP   L+ AL  H  ++G        A T   +     A+LG+
Sbjct:  954 LYEKFLLAVAKSLLDAFPAS--DKSFSKLLGEVPFLPESAFKLLDDLCQCDIFDSHGKEVHDGERVTQGLGAVWSLILGRPNNRLAFLDIALKCAVHSQDDIRSKAIRLVANKLYQLNYISQNIEQFATNMLLSA-------VEQRASDINPSQSVSTDQVVSQEVSVSCSQVSE------------------------------TGNCENDSMKGAQPLVQSVSTMSFPEVQRHISLFFALCTKNPSLLQTVFDIYGQAPKTVKQAVHRHIPVLIRALGSSYSE--LLRIISDPPEGCENLLMLVLQILTQETT--PSANLITTVKHLYETKLEDAT---------------------------ILIPILSSLSKNEVLPIFPRLVGLPIEKFQMALAHILQGSAHTGPALTPAEVLVSIHDISPNKDGLPLKKITDACSACFEQRTVFTQQVLAKALNQMVEQTP-----------LPLLFMRTVIQAIDAFPSLVDFVMEI-LSKLVSRQVWKMPKLWVGFLKCV----SQTRPHSFHVLLQLPPSQLESALNKHANLRGPLATYANQANTKTSLPRSTLAILGL 1455
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A1Q3AQP6_CEPFO (DUF3453 domain-containing protein/Symplekin_C domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3AQP6_CEPFO)

HSP 1 Score: 135 bits (339), Expect = 4.740e-28
Identity = 158/593 (26.64%), Postives = 269/593 (45.36%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLC--DMA-AQPHDVQTGE--CEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASV---RPPEVKKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVV----LLNQSDARVPIKSMTRALTLCLENKAVYNYPVLREALNVM-SQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEALAHPLMKGVKEPLRRY-AQTLVKVD-PG-VRAVLGMDS 3871
            +Y++ L+++  +L  +  PT   K F++ L + P +P +AL+L+  LC  D+  +   +V+ GE   +GL A+  LI  +P  R  C+  VL+   HS +D+R KA+RL AN L++       IE FA ++L S    + P+++  +T   E +       +V T+E  +   +V E                                       N V     P  +   A+ R+SL+FALC K   +L  + + Y  A    ++     +P+L RA   G     ++ +++  P  ++ L+ ++L +L    T  PSPEL+A V+ L +T+L +                              ++P+L  L +  V+   P L+    +  + A   + Q +   G   TP E++V    ++ + D  + +K +  A + C E + V+   VL +AL+ M  Q P           +PLL MRTV++++  FP L +FV  + L +LV  QVW    LW GFL+C      ++   SF  ++QLP   L+ AL       ++ PL  Y +Q   K+  PG   AVLG+ +
Sbjct:  802 VYEKFLVAVAKSLLDNF-PT-SDKSFSKLLGDVPFLPESALKLLDDLCYSDVVDSHGREVRDGERVTQGLGAVWSLILGRPNNRQACLDIVLKCAVHSQDDIRGKAIRLVANKLYQLGYIAENIEQFATKSLLSAVDQQTPDIEVSQTGANEQR----AEGEVATQETSISGSQVSEHGISENDSVRGAQPLG-----------------------NCV-----PSLSFPEAQRRISLFFALCTKKPSLLQLIFDIYGQAPRIVKQAFHRHIPILIRAL--GSSYTALLRIISNPPQGSENLLTLVLQILTQETT--PSPELIATVKHLYETKLKDAT---------------------------ILIPMLSSLSKNEVLPIFPRLVDLPLEKFQMALAHILQGSAHTGPALTPAEVLVSIHDIIPEKDG-LALKKIMDACSACFEQRTVFTQQVLAKALSQMVDQTP-----------LPLLFMRTVIQAIDAFPTLVDFVMEI-LSKLVSKQVWRMPKLWVGFLKCVY----QTQPHSFRVLLQLPAPQLEIALNK--YANLRGPLAAYVSQPSSKMSLPGSALAVLGLST 1310
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: A0A2P6PG16_ROSCH (Putative symplekin n=3 Tax=Rosoideae TaxID=171638 RepID=A0A2P6PG16_ROSCH)

HSP 1 Score: 134 bits (337), Expect = 8.160e-28
Identity = 158/590 (26.78%), Postives = 257/590 (43.56%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLC--DMAAQP-HDVQTGE--CEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVR--LSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVVLLN----QSDARVPIKSMTRALTLCLENKAVYNYPVLREALNVM-SQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEALAHPLMKGVKEPLRRYA-QTLVKVDPG--VRAVLGM 3865
            +Y++ LL++   L  S   +   K F++ L E P +P + L+L+  LC  D+  Q   DV+  E   +GL A+  LI  +P  R  C+   L+   HS +D+RTKA+RL AN L++      +IE FA   L S     +  +E    E      +  K  ++E  +  F+                                        + N       P  T +   V+  +SL+FALC K   ++  +   Y  A  A ++     +P+L RA   G   + ++ +++  P  ++ L++++L  L    T  PS +L+  V+ L +T+L +V                             ++P+L  L +  V+   P L+    +  + A   + Q +   G   TP E++V ++    + D  + +K +T A + C E + V+   VL +ALN M  Q P           IPLL MRTV++++  FP L +FV  + L +LV+ QVW    LW GFL+CA     ++   SF  ++QLP   L  AL       VK PL  YA Q  +K        AVLG+
Sbjct:  802 MYEKFLLAVAKCLLESFPAS--DKSFSRLLGEVPVLPDSTLKLLDDLCYSDVIDQHGKDVRDIERVTQGLGAVWSLILGRPHYRQSCLDITLKCAVHSQDDIRTKAIRLVANKLYQLNYISEVIEKFATDMLLSAVEQPLSGIEHSPSESTGQRTVG-KFGSQETSVSHFQ----------------------------------NLESGNSENDSTTKDQPVSTMSIPEVQRLISLFFALCTKKPSLIQLVFNTYGCAPKAVKQAFDRHIPVLIRAL--GSSNSELLHIISDPPQGSENLLMLVLQQLTQETT--PSSDLIGTVKHLYETKLKDVT---------------------------ILIPMLSSLAKNEVLPIFPRLVALPLEKFQTALAHILQGSAHTGPALTPAEVLVSIHSIVPEKDG-LTLKKITDACSACFEQRTVFTQQVLAKALNQMVDQTP-----------IPLLFMRTVIQAIDAFPSLVDFVMEI-LSKLVRKQVWRMPKLWVGFLKCA----SQTQPHSFHVLLQLPPPQLDSALNK--YTNVKGPLAAYAGQASIKASLSRPTLAVLGL 1304
[Close]
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Match: UPI000E703D6C (uncharacterized protein LOC113312324 n=3 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E703D6C)

HSP 1 Score: 134 bits (336), Expect = 1.080e-27
Identity = 140/553 (25.32%), Postives = 241/553 (43.58%), Query Frame = 2 
Query: 2147 LYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPRVPAAALELVCTLCDMAAQPH---DVQTGE--CEGLVALKDLIFHKPATRSVCIPSVLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEVKKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVNVVGPWQAPPDTAATARVRLSLYFALCVKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVAAAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGGEEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDVVRAAFRRLTQPAK--GATYTPPELVVLLN----QSDARVPIKSMTRALTLCLENKAVYNYPVLREALN-VMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKNFVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDKTLKEAL 3769
            +Y++ LL++  +L  +L  +   K F++ L E P +P +AL+L+  LC      +   DV+ G+   +GL A+  LI  +P  R  C+      + H   DVR KA+RL AN L++       +E FA   L SV       ++ ++          P  E+ +  + +   DE                                      V++           + A+  +SL+FALC K   +L  + + Y  A    ++ +   +P L R     F E   + +++  P  +K  ++++L +L   E   PS +L+A V+ L  T+L + A                            ++P+L  L ++ V+   P L+    +  +AA  R+ Q +   G   TP E++V ++    + D  V +K +T A T C E + V+   VL +ALN ++ Q P           +PLL MRTV++++  FP L +F+  + L +LV  Q+W    LW GFL+CA     ++   SF  ++QLP   L+  L
Sbjct:  810 VYEKFLLAVAKSLRDTLPAS--DKSFSRFLGEVPLLPDSALKLLEDLCCSEGFDNLGKDVRDGDRVTQGLGAVWSLILGRPLNRDACLTIAFNCSVHPQEDVRAKAIRLVANKLYRLSYASEKVEEFATNMLLSV-------IDQRI----------PDTESSQVGVTESNPDENVGVQETSTSGSQNSDPGVVPRSELAKDLHPALQTVSNVSL-----------SQAQRCMSLFFALCTKKPSLLQLVFDVYGRAPKTVKQAVHRHIPNLVRNLGSSFSE--FLRIISDPPQGSKNFLMLVLQVLT--EETTPSADLIATVKHLYQTKLKDAA---------------------------ILIPMLSSLPKDEVLPIFPQLVGLPLEKFQAALARILQGSAHTGPALTPAEVLVAIHGIHPERDG-VALKKITDACTACFEQRTVFTQQVLAKALNQLVDQTP-----------LPLLFMRTVIQAIDAFPTLVDFMMEI-LTKLVNKQIWKMPKLWVGFLKCA----SQTQPHSFGVLLQLPPPQLESTL 1284
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig71.15902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRB7_ECTSI0.000e+070.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPU9_9STRA4.670e-5147.74Symplekin tight junction protein C terminal-domain... [more]
A0A6P5GCT6_ANACO2.110e-3327.24uncharacterized protein LOC109722179 isoform X1 n=... [more]
A0A251S520_HELAN5.070e-3325.97Putative HEAT repeat-containing protein n=2 Tax=He... [more]
A0A2U1QKL7_ARTAN5.410e-3326.29HEAT repeat-containing protein n=2 Tax=Artemisia a... [more]
UPI001FB0A7775.230e-3125.43uncharacterized protein LOC124929488 isoform X1 n=... [more]
A0A5N5NNM0_9ROSI1.150e-2925.17Uncharacterized protein n=16 Tax=Saliceae TaxID=23... [more]
A0A1Q3AQP6_CEPFO4.740e-2826.64DUF3453 domain-containing protein/Symplekin_C doma... [more]
A0A2P6PG16_ROSCH8.160e-2826.78Putative symplekin n=3 Tax=Rosoideae TaxID=171638 ... [more]
UPI000E703D6C1.080e-2725.32uncharacterized protein LOC113312324 n=3 Tax=Papav... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig71contigL-elsbetiae_contig71:11420..21909 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1439.5
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FRB7
KEGG koko:K06100
KEGG Pathwayko03015,ko04530,map03015,map04530
Hectar predicted targeting categoryother localisation
EggNOG free text desc.mRNA polyadenylation
EggNOG OGsKOG1895@1,KOG1895@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03021
Exons15
Model size4357
Cds size3750
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.553568-UTR-L-elsbetiae_contig71:11419..115701622816787.553568-UTR-L-elsbetiae_contig71:11419..11570Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig71 11420..11570 +
1691683813.3673751-UTR-L-elsbetiae_contig71:11419..115701691683813.3673751-UTR-L-elsbetiae_contig71:11419..11570Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig71 11420..11570 +
1622816787.7447248-UTR-L-elsbetiae_contig71:21453..219091622816787.7447248-UTR-L-elsbetiae_contig71:21453..21909Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig71 21454..21909 +
1691683813.5452914-UTR-L-elsbetiae_contig71:21453..219091691683813.5452914-UTR-L-elsbetiae_contig71:21453..21909Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig71 21454..21909 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.5663097-CDS-L-elsbetiae_contig71:11570..116661622816787.5663097-CDS-L-elsbetiae_contig71:11570..11666Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 11571..11666 +
1691683813.3787127-CDS-L-elsbetiae_contig71:11570..116661691683813.3787127-CDS-L-elsbetiae_contig71:11570..11666Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 11571..11666 +
1622816787.578406-CDS-L-elsbetiae_contig71:12235..123071622816787.578406-CDS-L-elsbetiae_contig71:12235..12307Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 12236..12307 +
1691683813.3919864-CDS-L-elsbetiae_contig71:12235..123071691683813.3919864-CDS-L-elsbetiae_contig71:12235..12307Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 12236..12307 +
1622816787.5893898-CDS-L-elsbetiae_contig71:12898..130361622816787.5893898-CDS-L-elsbetiae_contig71:12898..13036Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 12899..13036 +
1691683813.4047303-CDS-L-elsbetiae_contig71:12898..130361691683813.4047303-CDS-L-elsbetiae_contig71:12898..13036Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 12899..13036 +
1622816787.6006446-CDS-L-elsbetiae_contig71:13421..135311622816787.6006446-CDS-L-elsbetiae_contig71:13421..13531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 13422..13531 +
1691683813.4150503-CDS-L-elsbetiae_contig71:13421..135311691683813.4150503-CDS-L-elsbetiae_contig71:13421..13531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 13422..13531 +
1622816787.6129794-CDS-L-elsbetiae_contig71:13844..145391622816787.6129794-CDS-L-elsbetiae_contig71:13844..14539Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 13845..14539 +
1691683813.4248571-CDS-L-elsbetiae_contig71:13844..145391691683813.4248571-CDS-L-elsbetiae_contig71:13844..14539Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 13845..14539 +
1622816787.6266596-CDS-L-elsbetiae_contig71:15072..157551622816787.6266596-CDS-L-elsbetiae_contig71:15072..15755Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 15073..15755 +
1691683813.4342256-CDS-L-elsbetiae_contig71:15072..157551691683813.4342256-CDS-L-elsbetiae_contig71:15072..15755Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 15073..15755 +
1622816787.6379063-CDS-L-elsbetiae_contig71:16348..167391622816787.6379063-CDS-L-elsbetiae_contig71:16348..16739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 16349..16739 +
1691683813.4437397-CDS-L-elsbetiae_contig71:16348..167391691683813.4437397-CDS-L-elsbetiae_contig71:16348..16739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 16349..16739 +
1622816787.6488712-CDS-L-elsbetiae_contig71:17062..172471622816787.6488712-CDS-L-elsbetiae_contig71:17062..17247Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 17063..17247 +
1691683813.4530702-CDS-L-elsbetiae_contig71:17062..172471691683813.4530702-CDS-L-elsbetiae_contig71:17062..17247Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 17063..17247 +
1622816787.6609159-CDS-L-elsbetiae_contig71:17742..178441622816787.6609159-CDS-L-elsbetiae_contig71:17742..17844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 17743..17844 +
1691683813.461762-CDS-L-elsbetiae_contig71:17742..178441691683813.461762-CDS-L-elsbetiae_contig71:17742..17844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 17743..17844 +
1622816787.6713784-CDS-L-elsbetiae_contig71:18202..187631622816787.6713784-CDS-L-elsbetiae_contig71:18202..18763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 18203..18763 +
1691683813.4809792-CDS-L-elsbetiae_contig71:18202..187631691683813.4809792-CDS-L-elsbetiae_contig71:18202..18763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 18203..18763 +
1622816787.6810417-CDS-L-elsbetiae_contig71:19253..193551622816787.6810417-CDS-L-elsbetiae_contig71:19253..19355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 19254..19355 +
1691683813.492952-CDS-L-elsbetiae_contig71:19253..193551691683813.492952-CDS-L-elsbetiae_contig71:19253..19355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 19254..19355 +
1622816787.6950536-CDS-L-elsbetiae_contig71:19596..197581622816787.6950536-CDS-L-elsbetiae_contig71:19596..19758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 19597..19758 +
1691683813.5065494-CDS-L-elsbetiae_contig71:19596..197581691683813.5065494-CDS-L-elsbetiae_contig71:19596..19758Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 19597..19758 +
1622816787.7093315-CDS-L-elsbetiae_contig71:20195..203901622816787.7093315-CDS-L-elsbetiae_contig71:20195..20390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 20196..20390 +
1691683813.5156095-CDS-L-elsbetiae_contig71:20195..203901691683813.5156095-CDS-L-elsbetiae_contig71:20195..20390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 20196..20390 +
1622816787.7208958-CDS-L-elsbetiae_contig71:20833..209771622816787.7208958-CDS-L-elsbetiae_contig71:20833..20977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 20834..20977 +
1691683813.5241487-CDS-L-elsbetiae_contig71:20833..209771691683813.5241487-CDS-L-elsbetiae_contig71:20833..20977Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 20834..20977 +
1622816787.7339053-CDS-L-elsbetiae_contig71:21339..214531622816787.7339053-CDS-L-elsbetiae_contig71:21339..21453Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 21340..21453 +
1691683813.5333972-CDS-L-elsbetiae_contig71:21339..214531691683813.5333972-CDS-L-elsbetiae_contig71:21339..21453Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig71 21340..21453 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig71.15902.1prot_L-elsbetiae_contig71.15902.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig71 11571..21453 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig71.15902.1

>prot_L-elsbetiae_contig71.15902.1 ID=prot_L-elsbetiae_contig71.15902.1|Name=mRNA_L-elsbetiae_contig71.15902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1250bp
MPASTELLDKVVELVNKAKVEAKEQKTYLLAQVKEICFNRDTSLLEEVIP
MVTEFQTDFNANCRKWVASFLRDVVRSHPEHVGLVVPVASFLMHDSNTNV
KKVAVLLANTTYRPALQRLVDNGSMEGAQQDWSVLEGLRKAVLNTITSGP
ADISMVAVKFAESVVLACVGGRGLAPGSSREGDKSVQRDLSPSHPFLLAD
TLDQAGHALARQMVGWLGNSGAGASGAAGAKGGTGWGLGFGAQHYTVLIN
ALQNLATNRAALFADIVPALATALESVNGGGRADGRGADGPKNPAAPKGL
QDAASSLRSACLRLLKVAPVASKSVQRLATAAALSGSDGEAKAAVDGNSA
LRGRIKLPARSRERPKASRAASPLPLPPPPRVMALTVENRRDLAALASSA
SLGKMPKPPPGYKQNRTKGFPLPDLDTLFGHVLNALGPEIATAKNQTPSE
GSGANGGESLGSKRARDPAADEGGGKRRSGENANGGGVKSDGASSGQGRS
PMEVDSAAGRDDAKTKKSKPGAAASSEVEPESGPPSDPVREGLEVSKKAY
SRVLGVWEGVAMEGQRGLHQRVVARLGRMLAEAEAAALAQESKASESEMV
VVEAMGFMAKDYRKRFQAALALLTDIYVADVAAAAAAAAAAQAAKQEKGK
STKRAAKLPKARGFDLYDEALLSLLTTLSGSLEPTWRQKLFTQTLLECPR
VPAAALELVCTLCDMAAQPHDVQTGECEGLVALKDLIFHKPATRSVCIPS
VLRFTHHSDNDVRTKAVRLAANLLWKDPAFQPIIEAFAKQALASVRPPEV
KKVETKVEEVKPPSPIRPKVETREEDLVDFEVDEEEEEDEGEEEIAPGKE
KSPAAPPAPARAPAAAAPAPATVNVVGPWQAPPDTAATARVRLSLYFALC
VKSRPMLSGLLEAYVTAAPAAQEGLKAELPLLARAAARGFGEAGVVGLVA
AAPVRAKALVLVMLDLLVPRETNKPSPELVAAVRRLRDTRLANVAKEEGG
EEGEGAKVGGGADEVNATSGIEYIVPILGGLGREGVMAELPALLQADDDV
VRAAFRRLTQPAKGATYTPPELVVLLNQSDARVPIKSMTRALTLCLENKA
VYNYPVLREALNVMSQVPAADQQGGGSKQIPLLLMRTVLESVQRFPELKN
FVATVVLVRLVQHQVWTSDGLWKGFLRCARMMAKESGATSFIAMVQLPDK
TLKEALAHPLMKGVKEPLRRYAQTLVKVDPGVRAVLGMDSGAREAPVKK*
back to top

mRNA from alignment at L-elsbetiae_contig71:11420..21909+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig71.15902.1 ID=mRNA_L-elsbetiae_contig71.15902.1|Name=mRNA_L-elsbetiae_contig71.15902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10490bp|location=Sequence derived from alignment at L-elsbetiae_contig71:11420..21909+ (Laminarionema elsbetiae ELsaHSoW15)
CACGACAGGCAGCAGACACTAGAGGCGAGCAGGGCTGCGACAAGCGGAGA
GGATTGGTGCACTCGGTGAACTGATCGTACGCCCACGTCCAGCAGTAGAC
TGAGCACTACATGCAGGCTGAACACTAAACCGGTGTCGGTGGAGTGAAAA
CATGCCGGCGTCGACGGAGTTGCTGGACAAGGTAGTGGAACTTGTCAACA
AAGCTAAGGTGGAAGCCAAGGAGCAAAAGACATACCTCTTGGCACAGGTA
TGGGAGAGAAACGTTGGCATCGCAAGACGCCATTGTTGTTGGGTAATTCA
TGGCAGTTAGTCTAATTATTTAAAAAAAACTTGCCAATCGACCAACTGCC
ACCACGGGACACCACGGTTGGGACGCAGGCAGGACGATGGTCAACACACA
GCGGGCGATGGCCAATGCAGATAGTCTTTGTGTGCAGTGTCTGCGCCACT
TGTATGCTTTTACTTTTGCCTTATTTACCTTGTACCGCGTTGCTGCTGGT
TCCATGCTCTGATCCACAAAACGGAAAAGCCTTCCTGCTGTCGATTCGAC
GTAAGAGGTTTGTGGGTGAGCCCAGGTACTGCTGTCCATGGCAGGTGCCG
ACGTCTTTCCGGAGGAGTCGTGAACTATAGACGCCTGGTTGGTTGGCTCT
TGATTTATTGTGAATTTGTGGTCAGGTCGGGGTGAAGGCGGCGGAACAAG
TGAGTCTCGACAATGTACATACATAAGTACCAGCTAATAATGGAGTGTGT
AGCAGCTCGTCTTCCCGATTTCGACGAAACTGGCCCAACGTTTGCCACCG
GATTGTTCTTTTTCAGGTGAAGGAGATTTGCTTCAACCGCGACACCTCCT
TGCTAGAGGAAGTCATCCCAATGGTGACTGAATTTCAGGTGCGAAAATCT
TTTGCGTGTGTTTTGCTCACATCACACAACTATTTAACCGATGCTAAACA
GCAATTTCGCTGCTGGGTTCGTCCCTGGAGTGCATATATACAACCAAGAC
TCCTTGGTCTCAAATGTACACCGTGGTGCTGTCGGGGAGAGCCCAAAGTT
ATGGGACATGCCACTATTCCCCGGGGTACTTTATCTTTCAAGGCAAAAAA
GTAGAGTAAAAAGGGGGGTTGGTCCTTTCGCGTGGGTATTGTAGGAGTGG
TGGCGTGTTCTGGCCCGAGAGTCACGTAAGCTGCATACCTGGAAAGCTTT
ACACAAGGTCCATCTCTTGTGTGCGCCTCACGGTGGGTAATCCGGTGGTG
CATGTTTGGTCATCTCGACAACGAAAACCCCCCGCGATGATCTTTATGTA
TACTTTGTCTTCGATGCGTACCTTCTGCAGTTCTCGCATGGTGCTTACTT
AGGTCACTTGCATCACATGTCGATACACTGCTACTGTACGACCTGTCCGA
AATGTTGCCCTTAGATACGCGCACCACGACGGCCACTAACTTCATCATTC
CTCTAACTTGTTTGTTCTGGGAATGAAAGACGGATTTCAACGCCAACTGT
CGCAAGTGGGTGGCGTCTTTCCTGCGAGACGTGGTGAGGTCGCACCCAGA
GCACGTGGGTCTGGTGGTTCCCGTGGCATCATTCCTCATGCACGACAGCA
ACACCAACGTCAAGAAGGTACGCCCGGTCGCCTTCTATCTACATCGTCTG
GTCCATGTAGATAGTTGTTTTTATTTTTGGGGATTTGACTACCTGTGCCT
TTCGTGCTTGCACGCCCAGTGCTGTCTGTGGCTCTCATCATCCAAGCCAC
TGATTTTGACTTTGTTTTTGGCATTCTTGACGGTTCGGCCTGCGGGAAAA
CACAGCATCATTGGTGGGTGCTTTGTCGACTCGATTGCCTGTCGCGTGTT
CTCGATGAAATTTCCTACCTGGTACCCACTAGCTGTACGCGATTCGCCCC
GCTTCACGGAGAAGTCAGTGTCCTGCGACATTTACCTGGCTTGATCTGAC
ATGATCCTCTCGCTGCCTCAACGGCTCTTCACGCCTGTCATTTCGTGGTC
AGGTGGCTGTCCTCCTGGCCAACACCACCTACAGACCTGCCCTGCAGCGG
TTAGTCGACAACGGCAGCATGGAAGGCGCTCAGCAAGACTGGTCGGTGCT
GGAAGGACTCAGGTCAGTTGTTTTAGCATGGTTCCATCACAGATCGCCTC
ATACTCTCTACAGACTACATGGCTGTTTTCTACTGGGGCAGTCAAGGTTC
CACGAATCGCCTGCACGCCACGTCTTGTGGTCGCAGTATGTCAAAATCCA
CTTTTTTGGTGGGTTCCGAATAAAAAGGCATGCGCAGACGTTCTATCTGA
TGGATAAGGGCCACGAAGCTTCGTCATACATTTCGCTGCAGCACAGGAGA
ACTAGGATTGTTCGTTTCCTTTACACCATCCCTTTTCCGTTATTGAACTC
GGCCCAATCCAATTCTACTGCGCAGGAAAGCGGTGCTGAACACCATCACC
TCGGGGCCGGCGGACATATCGATGGTGGCCGTCAAGTTCGCGGAGAGCGT
CGTTCTCGCGTGCGTAGGGGGGCGCGGACTGGCGCCCGGCTCCTCTCGTG
AGGGAGACAAGTCTGTCCAGAGAGACCTCAGCCCGTCTCACCCCTTCCTG
TTGGCGGACACTCTCGACCAAGCCGGCCACGCCTTAGCGAGGCAGATGGT
GGGCTGGCTGGGCAACAGCGGGGCCGGTGCGAGTGGCGCGGCGGGGGCGA
AAGGCGGCACCGGGTGGGGCTTGGGCTTCGGAGCGCAGCACTACACGGTC
CTGATAAACGCTCTGCAGAATTTGGCCACCAACCGCGCCGCGCTGTTTGC
CGATATTGTTCCTGCCTTGGCGACCGCGCTGGAGAGCGTCAACGGCGGAG
GAAGAGCAGACGGCCGGGGGGCCGACGGGCCGAAGAATCCAGCAGCGCCC
AAGGGGTTGCAGGACGCGGCGAGCTCGCTCAGAAGTGCCTGCCTTCGGCT
GCTGAAGGTCGCGCCCGTGGCGAGTAAGAGCGTGCAGAGGCTGGCAACGG
CTGCTGCTCTGTCGGGGTCGGATGGGGAGGCGAAGGCAGCCGTGGACGGG
AACTCGGCCCTTCGAGGGAGAATAAAGCTGCCCGCTCGCTCGAGAGAACG
GCCGAAGGCAAGCCGAGCAGGTACAAACATATTGCGGTTGCGCTCTTGAT
ATGGTTGTGGTTTTTGGTGGGTAATTTTCAAGGAAAGGTTCAGGGTCTGC
CAGTTGGGGGGGAAGCTGTCCTGTGTTTTTTGTTCGCGCAAGGTGTGTCA
GTTGTGAAAAGAAGTACGTATTAGTCAAGAGCAACGGTTGAACACACGAG
GTGTAGGACTGTATAAATCTGGCATGTGCTAGTCATGCAAACACCAGATG
TGTTTCGGGTTCCCACGGTTGGTGGCTTGTGTAGTCGGTCAGCCGCAGGG
TTTTGCATGTTTTAACGGTTGCATTCAATTTTTGTGCAAATAGGCCACGT
GCGTGCGGGGCCAAGCCTTCCCTGAAGAAATCAGCGTCTTGATCCATCAG
CCTTTTCCTCCCCAAAGAAGTCGACGTCCTCGCCGATCCATTCGGGTGTT
TGCGGGCGTTCAAGGCGCCGCCCACATCAGCAGATATCACAGATTTACCC
ACCGTTTCCCGTCCCCTACCACACCCCACCCTCAATCGTTGTCTGCGAAA
CAGCTTCTCCTCTTCCTCTTCCTCCTCCTCCCCGCGTCATGGCCCTAACG
GTGGAAAATCGACGCGACCTGGCCGCCCTCGCCTCCTCGGCTTCTCTGGG
AAAGATGCCCAAGCCGCCTCCGGGCTACAAGCAGAACCGAACCAAGGGCT
TCCCCCTGCCGGACTTGGACACGCTCTTCGGCCACGTTCTGAACGCCCTT
GGCCCCGAGATCGCCACGGCGAAGAATCAGACCCCCTCGGAGGGCAGCGG
TGCTAACGGGGGGGAATCGTTGGGGAGCAAGAGGGCGCGGGATCCGGCGG
CAGACGAGGGTGGAGGAAAGAGGAGGTCCGGCGAAAATGCCAATGGGGGG
GGCGTGAAAAGTGACGGGGCATCGTCGGGACAGGGAAGATCTCCGATGGA
AGTGGATTCTGCAGCAGGCAGGGATGATGCAAAAACGAAGAAAAGCAAGC
CGGGGGCAGCGGCGAGCTCCGAAGTGGAGCCCGAGTCCGGGCCTCCTTCC
GACCCGGTTCGAGAGGGGTTGGAGGTGTCGAAAAAGGCGTACTCTAGGGT
GTTAGGCGTGTGGGAAGGGGTTGCGATGGAGGGGCAGAGAGGGCTTCACC
AGAGAGTAGTGGCGCGGCTAGGGAGGATGTTAGCCGAGGCAGAGGCAGCT
GCGTTAGCGCAGGAGTCCAAGGCCTCCGAATCAGAGGTGGGGTCGAAGGA
ACCGTCGGATTTGTCAGACTCTCACGCAAGCGTGTGTTTGTGGCACGCAA
TATGCTGTTTGGCAGGAGGGTTTTTCGAGTTTTTCACGGAAACGCGCGTC
TCGAATGCTTCTTCTTACGCAGCCTTCCTCTTGATCTTGCTGTATTTTTT
TTATGCGAACCCCGTGCATACGAATTCATCTCCGCGAATGCCTTATCTGG
CGGAGTAAGCCAATAAGCAGCACTTTTACCTAAAATCGTGGACGTCTTCA
TTGGCGTCTCCGAGAGAGAGTTGCTCCGCAGATATCTCAGACTTTTCTGC
TCCTGAAATAGGCGCTGCAACGCGTCATTGCTTATCCTCCAGATCATTTG
CGGGTTACAAATAACCCCCGCCCACGCGCGATTAATATATCCTCGGCTTT
CAAGGGAAATGCATACAATGCGAACATTTGCCTTTGTTGCCGTCGCGATT
CTGCAAAGAGTGCCCGTACTCGTGCCCTGAACAAGTTGTTCCAAATCAAC
CATTTACTCCTACCGTGGACACATCTCCCCCGGGCTGTCTCTCTCTCTCT
CTCTCTTCACACGCCGCCTTCTTCCAAAGATGGTCGTTGTGGAGGCGATG
GGCTTCATGGCCAAGGACTACCGAAAGCGGTTCCAGGCGGCCCTGGCGTT
GCTGACGGATATTTACGTCGCAGACGTGGCCGCCGCCGCTGCCGCCGCCG
CTGCCGCCCAGGCGGCGAAGCAAGAAAAGGGCAAGTCAACCAAGCGGGCT
GCGAAGCTTCCCAAAGCAAGAGGCTTCGACTTGTACGACGAGGCGCTCCT
TAGCCTGCTGACGACGCTGTCGGGATCGCTGGAGCCGACCTGGCGACAGA
AGCTCTTCACGCAGACGCTGCTCGAGTGTCCGCGAGTGCCGGCGGCGGCG
CTGGAGCTGGTGTGCACGCTCTGCGACATGGCTGCTCAGCCGCACGATGT
GCAGACCGGCGAGTGCGAGGGTGGAAAGTGTTGCGGACAATTGCGTATTT
TTGGTGTGTGGGTGTGTGTGATTTGAATTTGTTTTCATGGCACCATTTTC
AGTGGCTGAAAATGCTTGGCATTTTACCCGTGTCACCGAGCGAGAAGTTC
TGTTGGAAACACCGCAACACTCGATAACCAAAGCGTTACAGAGTTGTGAG
TGCAGTCAGCAGGAGCAGCTTGCGCCACAGGGTTAGAGCTGCGCCTAGCA
TCCGTATGGTGCGTACGCTCCCTTCGTCTTGACTTGTTTTTGCCCGCCTT
CGTCGCGCGTTCGCTAACCACGTTCGGTTGTTTCCGTCGAAAGGTCTCGT
GGCGTTGAAGGATCTGATTTTCCACAAGCCGGCGACGAGAAGTGTGTGCA
TCCCCAGCGTCCTGCGCTTCACGCACCACTCGGACAACGACGTCAGGACC
AAGGCTGTGCGCTTGGCTGCCAACCTCCTCTGGAAAGACCCGGCATTTCA
GCCCATCATCGAGGCCTTCGCAAAACAGGTCAGCTACAGCTAAGAGACTG
CTAGCTAAATACCGTGGCACCCTGCCTAATTCTACTGTAGATACATGCTT
TTCGCAAGGGGTTTCGGCGAGAGAGGCGCGCCGACAGCTAACCGGAACAC
CACACGGACACGAACGAACATGGGTGCTCGTCGCTGCTCTTGTGCTGTGT
GCCACCGCACGACGCACCACCTCGCCATGGAAACAGCAAGGGTGTTCTGA
ATAGGAATACCTGGCCTGAGTCGGTGCAGGGTGTGGTGGACCCCGGAAAG
ACATTTGAAAATGCCGCCTTGTACACGAGGGTGCATGCACATGTTTTCTG
TTTTCTTTGCGCCCTGTGGTTGGACTTTTCGGTAGGTGCCTCCCCCGCAA
TCGTTGGGCTTGGTGCCGCTTGGCACGTCAAGAGACGAGGTGAATATCAC
GGCTGAGGTCGCCTTGGATCATTTTTTTGCGCGCCTTGGTATGCACCGAC
CGGTACGTGCTTTGTTCTTGCAGGCTCTCGCCAGCGTGCGGCCTCCAGAG
GTGAAGAAGGTGGAGACGAAAGTGGAAGAGGTCAAGCCACCGTCACCGAT
ACGGCCAAAGGTCGAGACGAGAGAGGTTAGTGGCGGCTGTCGTTTCATGT
ATAGCTGTTGGTCGTTATGAGAAGCTGAGAGGCACCAAACGTGTGACCGA
CTAGGTATGCGACGCCGAGAGGTGGCTGTGAATGCGCTCACTGCAAGACC
GCCGCAGCTTCGAAGGACGCCAGAGGTTTGTCGCTGCCCTACAGTAGTGC
CTGTAGTTGGTGCCTCGACCGTTGTGTGTACATCAGTGCGTGCTGAACTG
CGGCAGGCGTGTGGTTGTTTGCAGGAACTGCGTTTTATTGTCGAACCACA
CGACTGGCACGCTTTTAGAAGAGGCAAAACGGGAAACGCCACGGTTGATT
GATTGGTCCGTGTTGACTGTTGTGCTCTCGCAGGAAGACTTGGTAGACTT
CGAGGTCGACGAAGAGGAGGAAGAAGACGAAGGGGAGGAAGAAATCGCAC
CAGGAAAAGAGAAGAGTCCCGCTGCACCACCTGCGCCTGCACGTGCCCCC
GCCGCCGCCGCACCCGCTCCCGCTACTGTCAACGTGGTAGGGCCATGGCA
GGCGCCACCAGACACAGCGGCCACCGCGAGGGTGAGGCTGTCGCTTTACT
TCGCCCTGTGCGTGAAGTCTCGCCCGATGCTCTCCGGGTTGCTCGAGGCT
TACGTAACCGCCGCCCCTGCGGCCCAGGAGGGGTTGAAGGCGGAGCTACC
CTTGCTGGCAAGAGCGGCGGCGAGAGGGTTCGGCGAGGCGGGCGTGGTGG
GTCTGGTGGCGGCAGCGCCTGTCAGGGCGAAGGCGTTGGTTCTGGTGATG
CTGGACCTGCTCGTGCCCAGGGAGACAAACAAGCCCTCGCCGGAGCTTGT
GGCTGCTGTGCGACGGCTTAGAGATACGCGCCTCGCGAATGTGGCGAAGG
AGGAGGGAGGCGAGGAAGGGGAGGGTGCCAAGGTGGGTGGTGGCGTGACT
CTTGGCGGTACAATAGCGCAGCCAGGCTGGCACACAAGGAAGACCACCGA
TGCACTATTTACCCAGCTATTGTTGGTCGTATTGTTTGGTGCTCGAACTC
ATGCTCGCTGTTTGTCGCTCGGGGTTCCCCAATACGCTCAACACCTCCAG
GCAGTTTTATTTTTGAAGGCTGTTATCGCCTCAACTGTTCTCTACAGCGC
GGTTGCTGGTCGAAAGCGGGCGTGCACGCGCTGATCTTTGGTTCGGTCAG
GGTTGGCGAAAATAAGAGATACATTCGCGTCACGCGGCTGGATCGGTGTT
TTTCCGTGGGCTGACCGGCTGGCCTCGAATACTACTGTGACCTACAGCAA
CCGTGGAGATTCGTCTGTGAAAGGGCCTGTACTTTTCGTTTGCATATATA
GAAGTACAAATATATGTGTGTACGGAGTATATGTTCCAAGCCTTCTTGTC
GTTTTTACGTGAAAAAATTGCTTGGTTGCCCCAGGCGGACGAAGTTAACG
CCACTTCCGGGATCGAGTACATCGTACCGATACTAGGCGGACTTGGGCGA
GAAGGGGTCATGGCTGAGCTTCCCGCGTTGTTACAGGTGACCCATGAACT
TGTCAGAAGTACTGCAGTTTTGCCCCTCCCCCCCCGCCCCCGTGGAACAT
ATGCAAGGTATTTTGGTATATTGCTGGCAGTAGTTTGTAGACGTTGACAC
TTGGAATCAGTTTGGTCGTACTTTTTGCTCTCGCTCTATATATAGACGCC
GGGCTCTCCGGCTGACCTCCCCTCCTTTTTTATCGCCCTTCCCCTCCGCT
CAAACGCGCTCTGTCGTGGTTCTGCAGGCCGACGACGATGTGGTTCGAGC
GGCGTTCCGGCGGCTGACGCAGCCTGCGAAGGGGGCGACGTACACGCCTC
CAGAGCTGGTGGTACTGCTGAACCAGTCCGACGCGAGGGTGCCCATCAAG
AGCATGACGCGCGCGCTGACGCTGTGCCTTGAGAACAAGGTGAAATGACG
AAAATAGTTTTTGGTGGGCTATTAGTGCGAGTATAGGGGTGGTTTCGTGC
CCCAATCGTCGTTTACTTGTGACGACAAGTCTACTGCTTAGACGCCGACA
CAAAAGTTGTTGCAGCTTCATGTTTTGCTTGGGTTGGGGTGCGTCGTCGT
AAGCTCTGTGGTGAAAAATGTTGTCGTCCATTGCATCGGAGGGGGGATGT
TTCTGGTGCTGTAAGATGCGGCTAAGGAGTGCTGTTGACCCGGCTCTTAC
CCAAACACAAGCCGAGGTCTGCTGACTAGCCTTCTCTGTGGGTTCTGAGA
TGTGCGCTAGTGGACTCACGCACTTGTTGGGTACTTACAGTACCACGATT
TTTGCCTCATCCGCGAACCCTTTTCTCTTCCTCTTCCTTCTCGCGCGCCG
ACCGCCGCCTACGCCAAAAACGCCAGGCGGTCTACAACTATCCCGTGCTA
CGCGAGGCCCTTAACGTCATGTCACAGGTCCCAGCTGCAGATCAGCAAGG
CGGTGGAAGCAAGCAGATCCCCCTTTTGCTCATGCGCACCGTCCTCGAGT
CGGTCCAGAGGTTCCCGGAGCTCAAGAACTTCGTGGCCACGGTGGTACTG
GTCCGATTGGTCCAGCACCAGGTTGGTGCAGTTGGATTTATATTCTTGCG
GCATTTATTGCGAGCTTCCGGCATGTTATGTCGCTGGCGATCGGATATTG
GTTTGGGCGAGACGTCCTTTTACTTTGTGCTTCATGTGCGACCTGACCTG
CCTAGCCAGCCGCATTGGCCTTCCGTAGCTCGGTATGTGTCAGAGGACCC
CCCTTGGCTGATGCGATCGGTGCACCCGCAGTGAAGAGATATGCACGGGA
AAACTTGTTCATACATCTACGACCTGCCGCACGTAGATTCACCGAGTGCC
TTTGGCATCGATCCGACCAGATCTTCGCGGTGTCTTTGGTTGGCATGCCT
CGACCCGTTTTGCGGGGTGATGAAGCCCGTACGTCTTTATTGTCATCCCG
TGCTTGCTCATCTTACGTTTCTCCACTTACCTTCTCTTGACCCGCGGTTG
ACATGCCCGCAAAGGTGTGGACATCGGACGGACTGTGGAAAGGCTTCTTG
CGATGCGCCAGGATGATGGCCAAAGAGTCGGGGGCCACGTCTTTCATTGC
CATGGTGCAGCTGCCAGACAAAACGCTCAAGGAGGCGCTCGCCCATCCTC
TCATGAAGGTGAAGTGTTTTTTGATCTACATCGTAGGAGAGCCATGGTAC
CTTTGCTACGCGCGGTTTGTGACCATGCATCACCTCTCTCGTTCCCGCCG
CGTCTTTGTGCCTCATGCGCGGTGGAAACTCAGTCTCTGTAACGAGGAAC
AGGTCCTTGTCGGTCCACGAATATGTCGGCGAGGGTTACGCGTAGTTTTC
AACCTCTGCCTGCTGTTTCAGATGCAGCCGAAGAAGGTTCGTCCCGCTCA
AGCCCTCCGAAACTTGCGAATGTATATCCGTCTCAACTCGTTGCTGCGTT
TGTCCTTGGCGCCTTCTTCCTCCGCCCTCCTGTCCCTCGTGTGTATGTGC
GGTCGTTGTTTTCTTTGCAGGGGGTCAAAGAACCGTTGCGACGGTATGCG
CAGACTTTGGTGAAGGTTGACCCCGGGGTTCGGGCTGTGCTGGGAATGGA
CAGCGGGGCAAGAGAAGCTCCTGTTAAAAAATAAGAGAGTACACGTTGGG
TGTAGCGAGTTGCTCCTGGTGGGATAGCTTGGAACCTCTTGATGCGGTGC
TTGCCTCGTGCGCGGTGCACCTGAATAGTGTTCAGGGTAGAGGGCGTGGC
TTTCTTGACGATTGATCTCTCTCTTCTGAGGTGGTTTGGTGAAGGACGGA
TGTGTCACAAGAGCGGTTTGTGTGTTCGGGCTGTTTGATGGAGACGAGGA
GCTATGGCAGTGAAAGGAAACACCGCCCGTGTTCTTCAGACTCTTCCTGC
GAGAGTCGGCTATCGGCCTTTTACAGGTTGGCGGTCCTTGGCCGACCGGG
CGTTGATTCCGTGTGCGTTTTTTCTGTGTTTCTTGGCGAAGATGGTGCAC
CTACAAACTCGATCGGGGCTGTTGCCCGAATCATGATGTTCTTCGAGGTT
GTCACTTTTGAATACAACGAGGTGATGACGAGAGTTTGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig71:11420..21909+

>mRNA_L-elsbetiae_contig71.15902.1 ID=mRNA_L-elsbetiae_contig71.15902.1|Name=mRNA_L-elsbetiae_contig71.15902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7500bp|location=Sequence derived from alignment at L-elsbetiae_contig71:11420..21909+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGCGTCGACGGAGTTGCTGGACAAGGTAGTGGAACTTGTCAACAA
AGCTAAGGTGGAAGCCAAGGAGCAAAAGACATACCTCTTGGCACAGATGC
CGGCGTCGACGGAGTTGCTGGACAAGGTAGTGGAACTTGTCAACAAAGCT
AAGGTGGAAGCCAAGGAGCAAAAGACATACCTCTTGGCACAGGTGAAGGA
GATTTGCTTCAACCGCGACACCTCCTTGCTAGAGGAAGTCATCCCAATGG
TGACTGAATTTCAGGTGAAGGAGATTTGCTTCAACCGCGACACCTCCTTG
CTAGAGGAAGTCATCCCAATGGTGACTGAATTTCAGACGGATTTCAACGC
CAACTGTCGCAAGTGGGTGGCGTCTTTCCTGCGAGACGTGGTGAGGTCGC
ACCCAGAGCACGTGGGTCTGGTGGTTCCCGTGGCATCATTCCTCATGCAC
GACAGCAACACCAACGTCAAGAAGACGGATTTCAACGCCAACTGTCGCAA
GTGGGTGGCGTCTTTCCTGCGAGACGTGGTGAGGTCGCACCCAGAGCACG
TGGGTCTGGTGGTTCCCGTGGCATCATTCCTCATGCACGACAGCAACACC
AACGTCAAGAAGGTGGCTGTCCTCCTGGCCAACACCACCTACAGACCTGC
CCTGCAGCGGTTAGTCGACAACGGCAGCATGGAAGGCGCTCAGCAAGACT
GGTCGGTGCTGGAAGGACTCAGGTGGCTGTCCTCCTGGCCAACACCACCT
ACAGACCTGCCCTGCAGCGGTTAGTCGACAACGGCAGCATGGAAGGCGCT
CAGCAAGACTGGTCGGTGCTGGAAGGACTCAGGAAAGCGGTGCTGAACAC
CATCACCTCGGGGCCGGCGGACATATCGATGGTGGCCGTCAAGTTCGCGG
AGAGCGTCGTTCTCGCGTGCGTAGGGGGGCGCGGACTGGCGCCCGGCTCC
TCTCGTGAGGGAGACAAGTCTGTCCAGAGAGACCTCAGCCCGTCTCACCC
CTTCCTGTTGGCGGACACTCTCGACCAAGCCGGCCACGCCTTAGCGAGGC
AGATGGTGGGCTGGCTGGGCAACAGCGGGGCCGGTGCGAGTGGCGCGGCG
GGGGCGAAAGGCGGCACCGGGTGGGGCTTGGGCTTCGGAGCGCAGCACTA
CACGGTCCTGATAAACGCTCTGCAGAATTTGGCCACCAACCGCGCCGCGC
TGTTTGCCGATATTGTTCCTGCCTTGGCGACCGCGCTGGAGAGCGTCAAC
GGCGGAGGAAGAGCAGACGGCCGGGGGGCCGACGGGCCGAAGAATCCAGC
AGCGCCCAAGGGGTTGCAGGACGCGGCGAGCTCGCTCAGAAGTGCCTGCC
TTCGGCTGCTGAAGGTCGCGCCCGTGGCGAGTAAGAGCGTGCAGAGGCTG
GCAACGGCTGCTGCTCTGTCGGGGTCGGATGGGGAGGCGAAGGCAGCCGT
GGACGGGAACTCGGCCCTTCGAGGGAGAATAAAGCTGCCCGCTCGCTCGA
GAGAACGGCCGAAGGCAAGCCGAGCAGGAAAGCGGTGCTGAACACCATCA
CCTCGGGGCCGGCGGACATATCGATGGTGGCCGTCAAGTTCGCGGAGAGC
GTCGTTCTCGCGTGCGTAGGGGGGCGCGGACTGGCGCCCGGCTCCTCTCG
TGAGGGAGACAAGTCTGTCCAGAGAGACCTCAGCCCGTCTCACCCCTTCC
TGTTGGCGGACACTCTCGACCAAGCCGGCCACGCCTTAGCGAGGCAGATG
GTGGGCTGGCTGGGCAACAGCGGGGCCGGTGCGAGTGGCGCGGCGGGGGC
GAAAGGCGGCACCGGGTGGGGCTTGGGCTTCGGAGCGCAGCACTACACGG
TCCTGATAAACGCTCTGCAGAATTTGGCCACCAACCGCGCCGCGCTGTTT
GCCGATATTGTTCCTGCCTTGGCGACCGCGCTGGAGAGCGTCAACGGCGG
AGGAAGAGCAGACGGCCGGGGGGCCGACGGGCCGAAGAATCCAGCAGCGC
CCAAGGGGTTGCAGGACGCGGCGAGCTCGCTCAGAAGTGCCTGCCTTCGG
CTGCTGAAGGTCGCGCCCGTGGCGAGTAAGAGCGTGCAGAGGCTGGCAAC
GGCTGCTGCTCTGTCGGGGTCGGATGGGGAGGCGAAGGCAGCCGTGGACG
GGAACTCGGCCCTTCGAGGGAGAATAAAGCTGCCCGCTCGCTCGAGAGAA
CGGCCGAAGGCAAGCCGAGCAGCTTCTCCTCTTCCTCTTCCTCCTCCTCC
CCGCGTCATGGCCCTAACGGTGGAAAATCGACGCGACCTGGCCGCCCTCG
CCTCCTCGGCTTCTCTGGGAAAGATGCCCAAGCCGCCTCCGGGCTACAAG
CAGAACCGAACCAAGGGCTTCCCCCTGCCGGACTTGGACACGCTCTTCGG
CCACGTTCTGAACGCCCTTGGCCCCGAGATCGCCACGGCGAAGAATCAGA
CCCCCTCGGAGGGCAGCGGTGCTAACGGGGGGGAATCGTTGGGGAGCAAG
AGGGCGCGGGATCCGGCGGCAGACGAGGGTGGAGGAAAGAGGAGGTCCGG
CGAAAATGCCAATGGGGGGGGCGTGAAAAGTGACGGGGCATCGTCGGGAC
AGGGAAGATCTCCGATGGAAGTGGATTCTGCAGCAGGCAGGGATGATGCA
AAAACGAAGAAAAGCAAGCCGGGGGCAGCGGCGAGCTCCGAAGTGGAGCC
CGAGTCCGGGCCTCCTTCCGACCCGGTTCGAGAGGGGTTGGAGGTGTCGA
AAAAGGCGTACTCTAGGGTGTTAGGCGTGTGGGAAGGGGTTGCGATGGAG
GGGCAGAGAGGGCTTCACCAGAGAGTAGTGGCGCGGCTAGGGAGGATGTT
AGCCGAGGCAGAGGCAGCTGCGTTAGCGCAGGAGTCCAAGGCCTCCGAAT
CAGAGCTTCTCCTCTTCCTCTTCCTCCTCCTCCCCGCGTCATGGCCCTAA
CGGTGGAAAATCGACGCGACCTGGCCGCCCTCGCCTCCTCGGCTTCTCTG
GGAAAGATGCCCAAGCCGCCTCCGGGCTACAAGCAGAACCGAACCAAGGG
CTTCCCCCTGCCGGACTTGGACACGCTCTTCGGCCACGTTCTGAACGCCC
TTGGCCCCGAGATCGCCACGGCGAAGAATCAGACCCCCTCGGAGGGCAGC
GGTGCTAACGGGGGGGAATCGTTGGGGAGCAAGAGGGCGCGGGATCCGGC
GGCAGACGAGGGTGGAGGAAAGAGGAGGTCCGGCGAAAATGCCAATGGGG
GGGGCGTGAAAAGTGACGGGGCATCGTCGGGACAGGGAAGATCTCCGATG
GAAGTGGATTCTGCAGCAGGCAGGGATGATGCAAAAACGAAGAAAAGCAA
GCCGGGGGCAGCGGCGAGCTCCGAAGTGGAGCCCGAGTCCGGGCCTCCTT
CCGACCCGGTTCGAGAGGGGTTGGAGGTGTCGAAAAAGGCGTACTCTAGG
GTGTTAGGCGTGTGGGAAGGGGTTGCGATGGAGGGGCAGAGAGGGCTTCA
CCAGAGAGTAGTGGCGCGGCTAGGGAGGATGTTAGCCGAGGCAGAGGCAG
CTGCGTTAGCGCAGGAGTCCAAGGCCTCCGAATCAGAGATGGTCGTTGTG
GAGGCGATGGGCTTCATGGCCAAGGACTACCGAAAGCGGTTCCAGGCGGC
CCTGGCGTTGCTGACGGATATTTACGTCGCAGACGTGGCCGCCGCCGCTG
CCGCCGCCGCTGCCGCCCAGGCGGCGAAGCAAGAAAAGGGCAAGTCAACC
AAGCGGGCTGCGAAGCTTCCCAAAGCAAGAGGCTTCGACTTGTACGACGA
GGCGCTCCTTAGCCTGCTGACGACGCTGTCGGGATCGCTGGAGCCGACCT
GGCGACAGAAGCTCTTCACGCAGACGCTGCTCGAGTGTCCGCGAGTGCCG
GCGGCGGCGCTGGAGCTGGTGTGCACGCTCTGCGACATGGCTGCTCAGCC
GCACGATGTGCAGACCGGCGAGTGCGAGGATGGTCGTTGTGGAGGCGATG
GGCTTCATGGCCAAGGACTACCGAAAGCGGTTCCAGGCGGCCCTGGCGTT
GCTGACGGATATTTACGTCGCAGACGTGGCCGCCGCCGCTGCCGCCGCCG
CTGCCGCCCAGGCGGCGAAGCAAGAAAAGGGCAAGTCAACCAAGCGGGCT
GCGAAGCTTCCCAAAGCAAGAGGCTTCGACTTGTACGACGAGGCGCTCCT
TAGCCTGCTGACGACGCTGTCGGGATCGCTGGAGCCGACCTGGCGACAGA
AGCTCTTCACGCAGACGCTGCTCGAGTGTCCGCGAGTGCCGGCGGCGGCG
CTGGAGCTGGTGTGCACGCTCTGCGACATGGCTGCTCAGCCGCACGATGT
GCAGACCGGCGAGTGCGAGGGTCTCGTGGCGTTGAAGGATCTGATTTTCC
ACAAGCCGGCGACGAGAAGTGTGTGCATCCCCAGCGTCCTGCGCTTCACG
CACCACTCGGACAACGACGTCAGGACCAAGGCTGTGCGCTTGGCTGCCAA
CCTCCTCTGGAAAGACCCGGCATTTCAGCCCATCATCGAGGCCTTCGCAA
AACAGGTCTCGTGGCGTTGAAGGATCTGATTTTCCACAAGCCGGCGACGA
GAAGTGTGTGCATCCCCAGCGTCCTGCGCTTCACGCACCACTCGGACAAC
GACGTCAGGACCAAGGCTGTGCGCTTGGCTGCCAACCTCCTCTGGAAAGA
CCCGGCATTTCAGCCCATCATCGAGGCCTTCGCAAAACAGGCTCTCGCCA
GCGTGCGGCCTCCAGAGGTGAAGAAGGTGGAGACGAAAGTGGAAGAGGTC
AAGCCACCGTCACCGATACGGCCAAAGGTCGAGACGAGAGAGGCTCTCGC
CAGCGTGCGGCCTCCAGAGGTGAAGAAGGTGGAGACGAAAGTGGAAGAGG
TCAAGCCACCGTCACCGATACGGCCAAAGGTCGAGACGAGAGAGGAAGAC
TTGGTAGACTTCGAGGTCGACGAAGAGGAGGAAGAAGACGAAGGGGAGGA
AGAAATCGCACCAGGAAAAGAGAAGAGTCCCGCTGCACCACCTGCGCCTG
CACGTGCCCCCGCCGCCGCCGCACCCGCTCCCGCTACTGTCAACGTGGTA
GGGCCATGGCAGGCGCCACCAGACACAGCGGCCACCGCGAGGGTGAGGCT
GTCGCTTTACTTCGCCCTGTGCGTGAAGTCTCGCCCGATGCTCTCCGGGT
TGCTCGAGGCTTACGTAACCGCCGCCCCTGCGGCCCAGGAGGGGTTGAAG
GCGGAGCTACCCTTGCTGGCAAGAGCGGCGGCGAGAGGGTTCGGCGAGGC
GGGCGTGGTGGGTCTGGTGGCGGCAGCGCCTGTCAGGGCGAAGGCGTTGG
TTCTGGTGATGCTGGACCTGCTCGTGCCCAGGGAGACAAACAAGCCCTCG
CCGGAGCTTGTGGCTGCTGTGCGACGGCTTAGAGATACGCGCCTCGCGAA
TGTGGCGAAGGAGGAGGGAGGCGAGGAAGGGGAGGGTGCCAAGGTGGGTG
GTGGCGAAGACTTGGTAGACTTCGAGGTCGACGAAGAGGAGGAAGAAGAC
GAAGGGGAGGAAGAAATCGCACCAGGAAAAGAGAAGAGTCCCGCTGCACC
ACCTGCGCCTGCACGTGCCCCCGCCGCCGCCGCACCCGCTCCCGCTACTG
TCAACGTGGTAGGGCCATGGCAGGCGCCACCAGACACAGCGGCCACCGCG
AGGGTGAGGCTGTCGCTTTACTTCGCCCTGTGCGTGAAGTCTCGCCCGAT
GCTCTCCGGGTTGCTCGAGGCTTACGTAACCGCCGCCCCTGCGGCCCAGG
AGGGGTTGAAGGCGGAGCTACCCTTGCTGGCAAGAGCGGCGGCGAGAGGG
TTCGGCGAGGCGGGCGTGGTGGGTCTGGTGGCGGCAGCGCCTGTCAGGGC
GAAGGCGTTGGTTCTGGTGATGCTGGACCTGCTCGTGCCCAGGGAGACAA
ACAAGCCCTCGCCGGAGCTTGTGGCTGCTGTGCGACGGCTTAGAGATACG
CGCCTCGCGAATGTGGCGAAGGAGGAGGGAGGCGAGGAAGGGGAGGGTGC
CAAGGTGGGTGGTGGCGCGGACGAAGTTAACGCCACTTCCGGGATCGAGT
ACATCGTACCGATACTAGGCGGACTTGGGCGAGAAGGGGTCATGGCTGAG
CTTCCCGCGTTGTTACAGGCGGACGAAGTTAACGCCACTTCCGGGATCGA
GTACATCGTACCGATACTAGGCGGACTTGGGCGAGAAGGGGTCATGGCTG
AGCTTCCCGCGTTGTTACAGGCCGACGACGATGTGGTTCGAGCGGCGTTC
CGGCGGCTGACGCAGCCTGCGAAGGGGGCGACGTACACGCCTCCAGAGCT
GGTGGTACTGCTGAACCAGTCCGACGCGAGGGTGCCCATCAAGAGCATGA
CGCGCGCGCTGACGCTGTGCCTTGAGAACAAGGCCGACGACGATGTGGTT
CGAGCGGCGTTCCGGCGGCTGACGCAGCCTGCGAAGGGGGCGACGTACAC
GCCTCCAGAGCTGGTGGTACTGCTGAACCAGTCCGACGCGAGGGTGCCCA
TCAAGAGCATGACGCGCGCGCTGACGCTGTGCCTTGAGAACAAGGCGGTC
TACAACTATCCCGTGCTACGCGAGGCCCTTAACGTCATGTCACAGGTCCC
AGCTGCAGATCAGCAAGGCGGTGGAAGCAAGCAGATCCCCCTTTTGCTCA
TGCGCACCGTCCTCGAGTCGGTCCAGAGGTTCCCGGAGCTCAAGAACTTC
GTGGCCACGGTGGTACTGGTCCGATTGGTCCAGCACCAGGCGGTCTACAA
CTATCCCGTGCTACGCGAGGCCCTTAACGTCATGTCACAGGTCCCAGCTG
CAGATCAGCAAGGCGGTGGAAGCAAGCAGATCCCCCTTTTGCTCATGCGC
ACCGTCCTCGAGTCGGTCCAGAGGTTCCCGGAGCTCAAGAACTTCGTGGC
CACGGTGGTACTGGTCCGATTGGTCCAGCACCAGGTGTGGACATCGGACG
GACTGTGGAAAGGCTTCTTGCGATGCGCCAGGATGATGGCCAAAGAGTCG
GGGGCCACGTCTTTCATTGCCATGGTGCAGCTGCCAGACAAAACGCTCAA
GGAGGCGCTCGCCCATCCTCTCATGAAGGTGTGGACATCGGACGGACTGT
GGAAAGGCTTCTTGCGATGCGCCAGGATGATGGCCAAAGAGTCGGGGGCC
ACGTCTTTCATTGCCATGGTGCAGCTGCCAGACAAAACGCTCAAGGAGGC
GCTCGCCCATCCTCTCATGAAGGGGGTCAAAGAACCGTTGCGACGGTATG
CGCAGACTTTGGTGAAGGTTGACCCCGGGGTTCGGGCTGTGCTGGGAATG
GACAGCGGGGCAAGAGAAGCTCCTGTTAAAAAATAAGGGGTCAAAGAACC
GTTGCGACGGTATGCGCAGACTTTGGTGAAGGTTGACCCCGGGGTTCGGG
CTGTGCTGGGAATGGACAGCGGGGCAAGAGAAGCTCCTGTTAAAAAATAA
back to top