mRNA_L-elsbetiae_contig7094.15898.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7094.15898.1
Unique NamemRNA_L-elsbetiae_contig7094.15898.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A6H5L6L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L3_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 4.820e-74
Identity = 139/242 (57.44%), Postives = 171/242 (70.66%), Query Frame = 1
Query:  682 EEGGGDVEWCPLAARARACEAVPQLSEAFRKFDEKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVA-GDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPD-----------IVPLIVRERRWLVCKQLSSWVGFVLSHLNKYRKVTHRSAVAK 1371
            EE GGD EWCP  ARA ACE VPQL+EAFR+FDEKHPGATIIYLAHSGSR+YGT+T  SDVD+KGIFIPD +KE EA+    +  A A  ++   D  V     G     R PS    A     S + K +TFWYST +  S NT DD+D+E+IS+GRFFGQL+RGE+GGVETLHSMLV D+ LISDP+           IVP++VRERRW+V  +L+SW+GF+LSH++KYR+VT  S  A+
Sbjct:  269 EEKGGDGEWCPRVARASACEEVPQLTEAFREFDEKHPGATIIYLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEKEARRAAAQVKAVAKAQNMGGDTAV----PGDAKEARMPSSSSPALSPKGSGKGKEITFWYSTSNCDSRNTVDDVDVEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPEVYVPKYILRKQIVPIVVRERRWMVSSRLASWMGFILSHIHKYRRVTQESNAAR 506          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: D7G3H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3H5_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 2.080e-34
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 1
Query:  664 AGSSVGEEGGGDVEWCPLAARARACEAVPQLSEAFRKFDEKHPGA-TIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVA-GDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPD 1245
            AGSSVG+  G   +   LA++     ++P+   +  +     PGA +  YLAHSGSR+YGT+T  SDVD+KGIFIPD +KE EA+    +  A A  +   QD+     V G     R PS    A     S + K +TFWYST +  S NT DD+D+E+IS+GRFFGQL+RGE+GGVETLHSMLV D+ LISDP+
Sbjct:  181 AGSSVGDVPGPGHD---LASKQGV--SIPERGVSATRESSAAPGAGSRRYLAHSGSRLYGTNTAKSDVDLKGIFIPDVQKEEEARRAASQVKAVAKAQ---QDMGGDTAVPGDAKEARVPSSSSPALSPKGSGKGKEITFWYSTSNCDSRNTVDDVDLEIISLGRFFGQLIRGEIGGVETLHSMLVRDVELISDPE 368          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A6M0L1X5_9PROT (Uncharacterized protein n=1 Tax=Sulfurovum sp. bin170 TaxID=2695268 RepID=A0A6M0L1X5_9PROT)

HSP 1 Score: 75.1 bits (183), Expect = 5.430e-11
Identity = 47/186 (25.27%), Postives = 80/186 (43.01%), Query Frame = 1
Query:  781 EKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            E+     ++Y+   GS++YGT  P SD D KGIFIP+                         DV +  ++E                           F +++ D  + N+KDDID++L SV +FF  L +GE G ++ L SM  ED  + +D +   +++   +    + L S++G+ +     Y
Sbjct:   11 EQEQNCKVVYVTKYGSKLYGTDNPNSDTDYKGIFIPNKN-----------------------DVLLKKDLE--------------------------HFNFNSNDENTKNSKDDIDLQLFSVYKFFNLLKKGETGAMDILFSMFREDTQVYNDKEFTSMMMESYKKFYNRNLHSFIGYCVGQSKVY 147          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A1W1CI52_9ZZZZ (Thioredoxin, phage-associated n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1CI52_9ZZZZ)

HSP 1 Score: 73.9 bits (180), Expect = 1.490e-10
Identity = 48/195 (24.62%), Postives = 83/195 (42.56%), Query Frame = 1
Query:  754 LSEAFRKFDEKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            +     KF+ ++    ++Y+   GS++YGT  P SD D KGIFIP+                         DV +  ++E                           F +++ +  + N+KDDID++L S+ +FF  L +GE G ++ L SM  ED  + +D +   +I    +    + L S+VG+ +     Y
Sbjct:    8 IKNLIEKFENEY-SCKVVYITKYGSKLYGTDNPNSDTDYKGIFIPNKN-----------------------DVLLKRDLE--------------------------HFNFNSNEKNTKNSKDDIDLQLFSIYKFFNLLKKGETGAMDILFSMFREDTQIYNDQEFTSIIKENYKKFYNRNLHSFVGYCVGQSKVY 152          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A6S6TKD3_9PROT (Thioredoxin, phage-associated n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6TKD3_9PROT)

HSP 1 Score: 70.1 bits (170), Expect = 2.360e-9
Identity = 46/195 (23.59%), Postives = 82/195 (42.05%), Query Frame = 1
Query:  754 LSEAFRKFDEKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            +    + F+E+     ++Y+   GS++YGT  P SD D KGIFIP                          DV +  ++E                           + +++ +  + N+KDDID++L S+ +FF  L +GE G ++ L SM  ED  + +D     +I+   +    + L S++G+ +     Y
Sbjct:    3 IKNLIKNFEEEQ-NCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPYKN-----------------------DVLLKRDLE--------------------------HYNFNSNEKNTRNSKDDIDLQLFSIYKFFSLLKKGETGAMDILFSMFREDTQIHNDTSFTSIIMENYKKFYNRNLHSFIGYCVGQSKVY 147          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A6S6RXM5_9PROT (Thioredoxin, phage-associated n=1 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6RXM5_9PROT)

HSP 1 Score: 70.1 bits (170), Expect = 2.400e-9
Identity = 46/195 (23.59%), Postives = 83/195 (42.56%), Query Frame = 1
Query:  754 LSEAFRKFDEKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            + +  + F+E+     ++Y+   GS++YGT  P SD D KGIFIP+                         DV +  ++E                           + +++ +  + N+KDDID++L S+ +FF  L +GE G ++ L SM   D  + +D     +I+   +    + L S+VG+ +     Y
Sbjct:    3 IKKLIQNFEEEQ-NCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPNKN-----------------------DVLLKRDIE--------------------------HYNFNSNEDNTKNSKDDIDLQLFSIYKFFTLLKKGETGAMDILFSMFRADTQVFNDEKFTSIIMENYKKFYNRNLHSFVGYCVGQSKVY 147          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A4D6BGE4_9CAUD (Uncharacterized protein n=1 Tax=Aeromonas phage Asfd_1 TaxID=2562462 RepID=A0A4D6BGE4_9CAUD)

HSP 1 Score: 69.3 bits (168), Expect = 4.090e-9
Identity = 52/179 (29.05%), Postives = 80/179 (44.69%), Query Frame = 1
Query:  802 IIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            +I+    GS +YG +TP SD+D+KGI+IPD R                       D+ +G                      S K+   VT    TGD RS N+KDDID+E+ S+ +F     RGE   ++ LHS   +   +I+D  +   I + R       ++S++G+V+    KY
Sbjct:    4 VIFEGLHGSHLYGLNTPESDLDMKGIYIPDPR-----------------------DMLMG----------------------SVKKSYSVT----TGDDRSKNSKDDIDIEMFSLYQFIQDAARGETYALDMLHSPKDK---IITDSSVWQYIQQNRASFYTTNMTSYMGYVMKQAAKY 130          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A6S6SMB3_9PROT (Thioredoxin, phage-associated n=3 Tax=uncultured Sulfurovum sp. TaxID=269237 RepID=A0A6S6SMB3_9PROT)

HSP 1 Score: 68.2 bits (165), Expect = 1.020e-8
Identity = 45/195 (23.08%), Postives = 84/195 (43.08%), Query Frame = 1
Query:  754 LSEAFRKFDEKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            +    + F++++    ++Y+   GS++YGT  P SD D KGIFIP+                        +DV +  ++E                           + +++ +  + N+KDDID++L S+ +FF  L +GE G ++ L SM   D  + +D     +I+   +    + L S+VG+ +     Y
Sbjct:    3 IKNLIQNFEQEY-NCQVVYITMYGSKLYGTDNPNSDTDYKGIFIPNR-----------------------EDVLLKRDLE--------------------------HYNFNSNEDNTRNSKDDIDLQLFSIYKFFSLLKKGETGAMDILFSMFRADTQVYNDEKFSSIIMENYKKFYNRNLHSFVGYCVGQSKVY 147          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: A0A060AMZ7_9CAUD (Uncharacterized protein n=1 Tax=Cronobacter phage S13 TaxID=1327935 RepID=A0A060AMZ7_9CAUD)

HSP 1 Score: 65.1 bits (157), Expect = 9.660e-8
Identity = 46/172 (26.74%), Postives = 69/172 (40.12%), Query Frame = 1
Query:  823 GSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            GS++YGT+TP SD D KGIF+PD +                     D  +Q  P                             T  + TG   S NTKDD+D EL S+G+F    + GE   ++ LH+    D   +   D+   +V  R       + S++G+V    ++Y
Sbjct:   10 GSQLYGTNTPESDTDYKGIFVPDLK---------------------DLFLQKAPR----------------------------TLHFDTGSKFSKNTKDDVDCELFSLGQFINMAIAGETIIIDMLHT---PDHLTLQSTDVWSYLVNHRSEFYTTHMKSYLGYVRKQASRY 129          
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Match: Q56ET2_9CAUD (NrdC.11 n=7 Tax=Biquartavirus TaxID=1912143 RepID=Q56ET2_9CAUD)

HSP 1 Score: 63.9 bits (154), Expect = 2.220e-7
Identity = 46/179 (25.70%), Postives = 81/179 (45.25%), Query Frame = 1
Query:  802 IIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRKEAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSSSKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETLHSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKY 1338
            +I+    GS +YG +TP SD+D+KGIFIPD +                       D+ +  +V+ S  VT                         TG+ +S N+KDDID+E+ ++ +F  + ++GE   ++ LH+   +   ++SD  I   I  +R       ++S++ +V+    KY
Sbjct:    4 VIFEGLHGSHLYGLNTPESDLDMKGIFIPDPK-----------------------DILLS-QVKSSYSVT-------------------------TGNDKSKNSKDDIDIEMFTLKQFIHECVKGETAALDMLHTPTDK---IVSDSAIWQFIQSQRSSFYTTNMTSYMSYVMKQAAKY 130          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7094.15898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5L6L3_9PHAE4.820e-7457.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3H5_ECTSI2.080e-3447.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6M0L1X5_9PROT5.430e-1125.27Uncharacterized protein n=1 Tax=Sulfurovum sp. bin... [more]
A0A1W1CI52_9ZZZZ1.490e-1024.62Thioredoxin, phage-associated n=1 Tax=hydrothermal... [more]
A0A6S6TKD3_9PROT2.360e-923.59Thioredoxin, phage-associated n=1 Tax=uncultured S... [more]
A0A6S6RXM5_9PROT2.400e-923.59Thioredoxin, phage-associated n=1 Tax=uncultured S... [more]
A0A4D6BGE4_9CAUD4.090e-929.05Uncharacterized protein n=1 Tax=Aeromonas phage As... [more]
A0A6S6SMB3_9PROT1.020e-823.08Thioredoxin, phage-associated n=3 Tax=uncultured S... [more]
A0A060AMZ7_9CAUD9.660e-826.74Uncharacterized protein n=1 Tax=Cronobacter phage ... [more]
Q56ET2_9CAUD2.220e-725.70NrdC.11 n=7 Tax=Biquartavirus TaxID=1912143 RepID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7094contigL-elsbetiae_contig7094:2532..9447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeViruses
Seed ortholog score66.2
Seed ortholog evalue5.4e-08
Seed eggNOG ortholog1327935.A0A060AMZ7_9CAUD
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Predicted nucleotidyltransferase
EggNOG OGs4QC2N@10239,4QIM3@10662,4QQEW@28883,4QX55@35237
COG Functional cat.S
Best tax levelMyoviridae
Best eggNOG OGNA|NA|NA
Exons5
Model size1692
Cds size1692
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7094.15898.1prot_L-elsbetiae_contig7094.15898.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7094 2532..9447 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816787.1253605-CDS-L-elsbetiae_contig7094:2531..29781622816787.1253605-CDS-L-elsbetiae_contig7094:2531..2978Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 2532..2978 -
1691683813.0667014-CDS-L-elsbetiae_contig7094:2531..29781691683813.0667014-CDS-L-elsbetiae_contig7094:2531..2978Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 2532..2978 -
1622816787.1418433-CDS-L-elsbetiae_contig7094:3618..36991622816787.1418433-CDS-L-elsbetiae_contig7094:3618..3699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 3619..3699 -
1691683813.0811994-CDS-L-elsbetiae_contig7094:3618..36991691683813.0811994-CDS-L-elsbetiae_contig7094:3618..3699Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 3619..3699 -
1622816787.1548111-CDS-L-elsbetiae_contig7094:4216..44141622816787.1548111-CDS-L-elsbetiae_contig7094:4216..4414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 4217..4414 -
1691683813.0938048-CDS-L-elsbetiae_contig7094:4216..44141691683813.0938048-CDS-L-elsbetiae_contig7094:4216..4414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 4217..4414 -
1622816787.1686964-CDS-L-elsbetiae_contig7094:5427..55871622816787.1686964-CDS-L-elsbetiae_contig7094:5427..5587Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 5428..5587 -
1691683813.1029468-CDS-L-elsbetiae_contig7094:5427..55871691683813.1029468-CDS-L-elsbetiae_contig7094:5427..5587Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 5428..5587 -
1622816787.183336-CDS-L-elsbetiae_contig7094:8641..94471622816787.183336-CDS-L-elsbetiae_contig7094:8641..9447Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 8642..9447 -
1691683813.1119695-CDS-L-elsbetiae_contig7094:8641..94471691683813.1119695-CDS-L-elsbetiae_contig7094:8641..9447Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7094 8642..9447 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7094.15898.1

>prot_L-elsbetiae_contig7094.15898.1 ID=prot_L-elsbetiae_contig7094.15898.1|Name=mRNA_L-elsbetiae_contig7094.15898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=564bp
APFQLPWERAAAWQATTPKRQRAGLRAAAGPERAGPYPLPASRPGVSSTD
GETSLSPKRNATRGRGLTKTMAAAVDSAHQPQPAHTSRPRPLPPQSVSAT
PESRVQPGVGVGVGGEGDASGPGPAAAGSLQAGQTLAAAEITASDAAGIR
SAGKTAGAMQTGTRLAPVSTTSDGQAGRPAAAAAAAAEGGATSGEGKGEG
EAEAGEGGRGVEAAAVSNTAAAGSSVGEEGGGDVEWCPLAARARACEAVP
QLSEAFRKFDEKHPGATIIYLAHSGSRMYGTSTPTSDVDVKGIFIPDSRK
EAEAKARVKEATAGAPVESEDQDVQVGPEVEGSEGVTRPPSQPQVAGDSS
SKEDKGVTFWYSTGDTRSTNTKDDIDMELISVGRFFGQLLRGEVGGVETL
HSMLVEDICLISDPDIVPLIVRERRWLVCKQLSSWVGFVLSHLNKYRKVT
HRSAVAKRKTVQRIREHNAALLKEARLAAAAAAEPVSAAGAAAPTSTLPL
PSVSSSTPAVSAPVGEEGGKGGEAPAGPLAAPAAAAAAAAGEETAGAKAV
RKTPSPGVASGSGG
back to top

mRNA from alignment at L-elsbetiae_contig7094:2532..9447-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7094.15898.1 ID=mRNA_L-elsbetiae_contig7094.15898.1|Name=mRNA_L-elsbetiae_contig7094.15898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6916bp|location=Sequence derived from alignment at L-elsbetiae_contig7094:2532..9447- (Laminarionema elsbetiae ELsaHSoW15)
GCTCCTTTCCAGCTCCCTTGGGAGCGGGCAGCCGCGTGGCAAGCTACCAC GCCTAAGAGACAGCGCGCGGGTTTGAGGGCAGCAGCGGGGCCGGAGCGGG CGGGTCCGTATCCCCTCCCCGCGAGCCGCCCGGGCGTTTCGAGCACCGAC GGCGAGACCAGCTTGAGCCCTAAACGGAACGCCACAAGGGGCCGCGGCTT GACCAAAACGATGGCGGCGGCGGTGGACAGCGCCCACCAGCCGCAACCGG CGCACACATCACGGCCACGACCACTGCCACCACAATCTGTCTCAGCGACA CCGGAGTCCCGGGTGCAGCCCGGGGTGGGTGTAGGGGTAGGCGGCGAGGG CGATGCCTCGGGGCCGGGACCAGCGGCGGCGGGCTCTCTGCAGGCGGGAC AGACCTTAGCTGCGGCGGAGATAACCGCCTCGGATGCTGCGGGGATCCGC TCGGCCGGGAAGACGGCGGGGGCGATGCAGACTGGTACTCGCTTGGCACC TGTGTCGACGACGAGCGACGGGCAAGCGGGGCGGCCGGCGGCAGCGGCGG CAGCGGCAGCGGAGGGTGGGGCCACTTCGGGCGAGGGCAAGGGCGAGGGC GAGGCCGAGGCCGGAGAGGGGGGGCGTGGGGTGGAGGCAGCAGCCGTGAG CAACACCGCCGCTGCCGGTTCTTCTGTCGGAGAGGAAGGGGGTGGAGATG TCGAGTGGTGCCCCCTTGCGGCGAGGGCTAGGGCGTGTGAGGCGGTCCCC CAGCTGTCCGAAGCGTTCCGGAAGTTTGACGAGAAGCATCCGGGTGCCAC CATCATGTGAGAAGACCTGTTGTTGTTGTTACTGTAGGTGACACAAGATA CCACACCCCCTGGACCGATTTTTAGAGCTCCATTACCTACTCCGCAACGA AGAGGGCGCCAGCACCAAACAACACATTTTCGGACAACCCTCGACGAGAC CTTTCCAACGCCACCCCCTTTCGGCACTAGCACTTTTATTGCTGTGGAGG AATCGAGCTTTGAAAATTTGTCCAGGGGGTGTGGTATCTTGTGTCACCTA AGGTATCTTGTTGTTGTTGTTGTTATTGTTAATGTTGTCGTCGTCGCACT AAAACTCGTTAAGATGTCTCGGCGCAGTTGTTTTTTATTCACATTTATTT CCGGTGCTCAAAGGACTCCTTGCCACGAGGGCATCTTGCCGCGGTACTGA ACCGTGGTCACACAGGAAGGTTCCTCTCCCCGAGGCCCCCCACTCCCCCC TTCTGCGGTGCTTGCCCCCCTTAAGATTCTCGTCGCGAGAAGGGTTCAGC AGCCCCCTTCCCCCGTCGACGTTGAGGTCGAACTTTGTGTACACAACGCA AAGCTTTATCCACTGACAGGGGCGAAAGCAAGAGAACAAACTCACTTTTT GCGAGAAAAAGTCGCTTCCGCCGGGAATTGAACCCGTGACCTGCCTGCTA GAAGGTGTTCTGGGATACCAACTAGACCACCGGAGCGACCGACGTACCTT CATCTGTCCGTTCTCATCCAACACTTGATCATGAGCCGAAATGAAACCAT TAGACCAGTCAGCGCTGACTGGTCTGTTGGTTTCATTTCGGCTTCCAAAG GTCGATTCCCGTGTCCACACGCTATCTACATGCTACAAGATAGATACACC CTCAACAGCAAGAGGGAACCAAATGTCGACGCCTCGCGATAAATAGAAAC AACAACCAGACGTTATGCAGAGAAGTCTGAATAACGCATGAAGCATCGGC GCCGTAACGGCAGAGCTCTACTGGTGTTTCTATTTACTGTGTGCCGTCGA GATAGGACAACCTTTGCGAAGAACTCCTCTCGATAAAGGAAATACCGTAG GTGTGACACAAGATACCACACCCCCTGGACAGATTTTCAAAGCTCGATTC CCCCCAAGCGAGAATAATGACAGTGCCCAAAGGAGTGGCGTTGGAAATAT CTGGTCGAGGGCTGTCCGAAAATGTGTTGTTTGGAGCTGGCACTTTCTTC GTTACGGAGTAATTAATCGAGCTCTAAAATTCGATCCAGGGAGTGTGGTA TCTTGTGTCACCTCGGTAATAGACACGGGTTCCGCGACCCCTAACTCCAA AACCCCTAAAACCCCTAACCGACCCCATCAGCCGGGTCCATACTTGATCC CGCATGGTTTCTTACAGTAGTAGTAAATTCTGCGAAGACTACTGTCGAGA TAACGCCCCGGAGTAGTCCATGCGACGGAGCTTAGGTGTTGATGCGGGTT TGTTTCCCTGTATGGCGGCGTGGCGCGCTCCCATTCGCGACCTTGATCGA CGGCATGAGCTTGTTCAAGAGCTCGGAGAATTTTTGCGGGTTTTGGTCTC ACAAGGCACGATGAAGGTGAAAAAACGCGCTGATTCTCACCCCTACGGTA CCGGCCCGCTCATAAGAAACTCTCTCACAAGAGACTCAGCCTCAGATTTA CCAAAAATGGGGGCTCTGTGGCGAGTGCTATACACTCAATCCTATCTACA TAACTTCATTAAGAAACTCACAGCCCCGGCCGAAATTTCAGTTTCTTATG ATCGGGCCGGTAGTACTGCTGTATGGGAAAGAGTGAAGAGATTTCGAGAT TTTTCGCGTTTCCGTTCGTGGTCCGTGACCATGACACGCCGTCGGCGTTT TCCCCAAGCGCTCCGAACACCGCCATCACGCGGGCGTTGGCGGTCTAACT TTCGGGGTGGTGTGTTGGGGAAGATTATAGGGTTAGGGTTACTGAGTGGT GCTGGCCTGCATCGCAAATATCTGATACAAGACGCCGTGCCGTGATGCGC CAGCCACCAAGGCAGTGACTTGTTTTCGGCGCCAGATTCGGACCCCTTGC TAACCCTAACCCTAACCCAGAAGATGAGTCAGGGTTAGATGGATGAAACC CCACCCTTGTGATGGGATTTGAAGCGAGGAGACGCAAACGACGAGTAAGT TCTGGCGGAGGGTTATTCTACCGCCATCGTGGCTAGATACCACATGATGT GACAGCGGTGCTGTCTTCTGGCAACAGTAGTTGGTTGCACTGAACGTGGA GCTGCCCATGGAAGAAGTCGGGGCGATGCTTGGCTTCCCGGGGATAACTT GTGCGGTGTTTTCGGTGGGGTGGGTGCCTTTCGGCATTTTGTGGCGTTGG AGAGCTACGTACCAAGTATACCACCAATACTGTACGTACGTACGCACTTG GGAGATCTGGCAGGCAAGGGGGGTTTCCATAGATAGCGTTTCGGCGTTTT CTCTGCCCCGGTTTTGCTCTCCGGGCGTACTACTGTAGCAATTTTTCGCC ACACCTCTTCACAACCGGTGCCCGCACAAAAGCAACCAGCGGGGGCACAC GCGCCATTTTGGGCTCCCTGTTCCCGAACGACTCTGAATAATATATCCAA CACATGGGAGAGGGTGCTAAAGACTAGCTATGATGTACGGAATGCATATA GTCTATATTACGTCACTATATGGAATACCGAAAATTCTCACGGGAGTCCC GTCTCCAATGATAGTGCGTGTTTTTTGGTAATTTATTAATCCATTCTTTG GTTTTGGGCAGGCAATATATGGTGTTTAATTTAGTTTAATTATTAATTAA TTGTTTGGTTTGGGGCAGGGAACATGGAGAAAAAAGAAAAGAAAAAAAAA AGAAAAAAAGGAGCTACATGCGTATTGGTTATTTATCCCTCCAAGTCCCG ATGCAAACTTCAAGCTTCGGCTCTGAGTCGCCCGAGCCACGCTCTTTGCA TGCTGGTACTCAACTGCTACATACTACTCCCGCACTTGCTAGTAGTTTTG CCTCGCTGAGCGTGAGCGTCATCTGCCTCTGTCGCCCGCTTGCCGCGCCC ACCCGCACAGCTACCTCGCACACTCCGGGTCCCGCATGTACGGCACCAGC ACGCCAACGTCGGACGTTGACGTGAAGGGGATCTTCATCCCGGATAGTCG CAAGGAGGCCGAGGCGAAGGCCCGCGTCAAGGAGGCCACGGCGGGGGCGC CGGTCGAGTCTGAGGATCAAGTGAGCTCGCCCGCCCGATTGACAGTTCTG CTGACAGTCCCGTTGTTGCTGCGGTTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGCTGTCGTTGC TGTTGATGTTGTTTTTGTTATTGTAAATATGTTGTTTGGTTGCTTGTTTG TTGTTGTTATGTAGTGTTGGTTTGTTTCTGTCTGCAACTGGTTGTTTGGA CCGCCTACGCAGAAATTAATTTTATACTACTAACTCTAACCCTAACCCTA ACCCCAACCACCGACCCCCCCAAACGGTTTCCATACTTTATCCCATATGT TAGCTTAAGACAAAAACCCCGCATAGACTACTGGGTTGTTTGAGAAGGGC GTGCATGTTATTTGTTTTTAGAGAGGGCGCCTTGGGAAGTTGAGTTCAGG TAGCTCAAGGAGGAAAGACGGCACAAAGATAGTGTACAGTAGGAGGTGTT GCTGTAGCGCTTCCAAAGCGATGGCTTGACTGGCCCGCTGCCTGGAGCGC CGTCGTTCTTGATGAATGCATGGTATACATATCGGCTTCCTGTTCACAGC TGGTCTTGGAAGTGCAGGTAGTGGAGGTTGAGCGTCGGCGAAGGGTGATG TGCTTTCTGCGTGGGGAGTGGGGGGGGGGGGGTAAAAAAGCCGCAAGCCG ACGGGCGTTGCGTCTTCAGAATAATTTTGGGCATCTATTTAGGGGGGCAG GAGCAGCAGCAGCAGCAGCCCGTCGTCGAGATTCTATGTTGGCATCCCTT TTGCCGTGCCTGCCGCTGTCCGAGATCTGAATCAGCATCGCTCTTGCGCA TCGCTTTTGGTCGCTCTTGCCAATCGCTTTTGGTCCGCGCTCACTTCGCC TTACCGGTCTGTAGGTGATTCAGCGCACCCCCTCGTGAGTGCAAGCAGGC TGGCTTCTGCCAGGTCCCCCCCTCCCCCGTCCTGTCCACTGTAGCTGCAC CCCACGAAGCCCCCCCCCCCCCTCCCAACGCAGGATGTACAGGTGGGCCC GGAGGTGGAGGGATCCGAGGGCGTAACCCGCCCTCCCAGCCAGCCCCAGG TGGCGGGCGACAGCAGCTCGAAGGAAGACAAAGGGGTTACCTTCTGGTAC TCCACCGGAGACACCAGGTCCACCAACACGAAGGACGACATCGACATGGA GCTCATCAGCGTCGGCAGGTTTTTCGGCCAGGTGAGTTGAGGAGGAGGCG GGTCTTCTTTCCGGTTTGCGCGAGACGTCTGTCTCCCCCATGTCGCCTTC TGGCCTGCCTGCCCGCCTTCCTTCCTGCCTCACCCGTTCTGTGCCGCTGC TGCGTGCATGCAACAAACGAATCCAGGGATCTTGGATAAAGTGCAGCTGC TGTGCCAAGCACACTCGCACGCACGCGTCTTGGATAAAGCGCTACATCTG CTGGCCGTAACCCTCTGCTGCATGCAATCCACGGAAAAAAAAAAAAAATA CACGGGGGCTACATGCACGTGTAAATATCGTAAAGAGCGGCTACTCTGTG TGTTGCGTCGGTTGATTCGTTCTGCTTCGGTGGTCTGGGTGAAGATTTCA GCATCTTGTCTGCGGTTACACGCCGGCCTCGGCCAACCCACGAATGTAAT TAAATCCCTCTCACATGGCCTTTTTTTGTTGTTTTGTTTGTTTTTCTCTC TTTATGTTGTTTGTTTGTTTCTTTTTTTTGTTTCTTTTGCGTGCGCAGCT GCTCCGGGGCGAGGTTGGCGGCGTGGAGACACTCCACTCCATGCTGGTGG AGGACATCTGCCTCATCTCAGATCCCGACGTACGTGCCCTTTCTCTTTTC GAGGGACAGGGGCGAGTGTTTCGTCGGGGGCTCCGTGAATGAGGATACAT ATCTATGTGGGGGGATCGAATGCCCTCCCATTCGCGAGAAGTGGATTATG TTTGCGTTGTCATGATCAGGAAACACTGTTGTATTGTACGTAGTCTGATT GGCCCAAACATATTCCAAGGGACTAACAGAGGCAACCAGCAAGCGCAGCA CGGTAGGCATGCGTGGGTCGCACCCTTCCGCCGTGCTATTCTTGTCTCCG TGTTGGCTCAAGACGCACCCACTTCTTCCTTCCTCGGATACGGGCAGGGG TTATGACACGTGTTGCCCTACGCAACCCCCGGATTCGGGGTGGAAACTAT TCCGAAAATGCCCAAATCCTTCCTGTTGTGAAGGCTGTGTTTTTGGTACA ATATAGAGGCTGCTTTTTTTGTTTTTTTTTGTCTCAGGGTGCCCAATCAA AGCGCGTATCGGAACTGCTTGTGACAACGTTTCAACCCTTTGAGGCTAAC TACTCGAAAGGGCTAGTCGCTCGGGGGTCCACACGACCCCCCCCCCCCTC TTGCCTCTTCATCCCTTCCCGGTATTCATGTCGAGACCCCCCCCTTTGCC GCCGTCCCGGACCAATCAGATTGTGCCGCTCATCGTGCGGGAGCGGCGTT GGCTGGTTTGCAAGCAGCTCTCCAGCTGGGTCGGCTTCGTCCTGAGCCAC CTCAACAAGTACAGGAAGGTCACGCACCGGTCCGCCGTGGCAAAACGCAA GACCGTGCAGCGGATTCGCGAGCACAACGCCGCCCTCCTTAAGGAGGCCA GACTTGCTGCCGCCGCCGCCGCTGAGCCGGTCTCGGCGGCCGGGGCGGCG GCTCCGACCTCAACGCTGCCGTTGCCGTCTGTCTCGTCCTCGACTCCGGC AGTCTCGGCTCCGGTAGGCGAAGAAGGCGGCAAGGGCGGAGAGGCTCCGG CGGGGCCGCTAGCAGCGCCAGCAGCAGCGGCGGCGGCGGCGGCAGGCGAA GAGACAGCCGGCGCCAAAGCCGTGAGGAAAACGCCGTCACCGGGTGTTGC GTCCGGGAGCGGGGGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig7094:2532..9447-

>mRNA_L-elsbetiae_contig7094.15898.1 ID=mRNA_L-elsbetiae_contig7094.15898.1|Name=mRNA_L-elsbetiae_contig7094.15898.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3384bp|location=Sequence derived from alignment at L-elsbetiae_contig7094:2532..9447- (Laminarionema elsbetiae ELsaHSoW15)
GCTCCTTTCCAGCTCCCTTGGGAGCGGGCAGCCGCGTGGCAAGCTACCAC
GCCTAAGAGACAGCGCGCGGGTTTGAGGGCAGCAGCGGGGCCGGAGCGGG
CGGGTCCGTATCCCCTCCCCGCGAGCCGCCCGGGCGTTTCGAGCACCGAC
GGCGAGACCAGCTTGAGCCCTAAACGGAACGCCACAAGGGGCCGCGGCTT
GACCAAAACGATGGCGGCGGCGGTGGACAGCGCCCACCAGCCGCAACCGG
CGCACACATCACGGCCACGACCACTGCCACCACAATCTGTCTCAGCGACA
CCGGAGTCCCGGGTGCAGCCCGGGGTGGGTGTAGGGGTAGGCGGCGAGGG
CGATGCCTCGGGGCCGGGACCAGCGGCGGCGGGCTCTCTGCAGGCGGGAC
AGACCTTAGCTGCGGCGGAGATAACCGCCTCGGATGCTGCGGGGATCCGC
TCGGCCGGGAAGACGGCGGGGGCGATGCAGACTGGTACTCGCTTGGCACC
TGTGTCGACGACGAGCGACGGGCAAGCGGGGCGGCCGGCGGCAGCGGCGG
CAGCGGCAGCGGAGGGTGGGGCCACTTCGGGCGAGGGCAAGGGCGAGGGC
GAGGCCGAGGCCGGAGAGGGGGGGCGTGGGGTGGAGGCAGCAGCCGTGAG
CAACACCGCCGCTGCCGGTTCTTCTGTCGGAGAGGAAGGGGGTGGAGATG
TCGAGTGGTGCCCCCTTGCGGCGAGGGCTAGGGCGTGTGAGGCGGTCCCC
CAGCTGTCCGAAGCGTTCCGGAAGTTTGACGAGAAGCATCCGGGTGCCAC
CATCATGCTCCTTTCCAGCTCCCTTGGGAGCGGGCAGCCGCGTGGCAAGC
TACCACGCCTAAGAGACAGCGCGCGGGTTTGAGGGCAGCAGCGGGGCCGG
AGCGGGCGGGTCCGTATCCCCTCCCCGCGAGCCGCCCGGGCGTTTCGAGC
ACCGACGGCGAGACCAGCTTGAGCCCTAAACGGAACGCCACAAGGGGCCG
CGGCTTGACCAAAACGATGGCGGCGGCGGTGGACAGCGCCCACCAGCCGC
AACCGGCGCACACATCACGGCCACGACCACTGCCACCACAATCTGTCTCA
GCGACACCGGAGTCCCGGGTGCAGCCCGGGGTGGGTGTAGGGGTAGGCGG
CGAGGGCGATGCCTCGGGGCCGGGACCAGCGGCGGCGGGCTCTCTGCAGG
CGGGACAGACCTTAGCTGCGGCGGAGATAACCGCCTCGGATGCTGCGGGG
ATCCGCTCGGCCGGGAAGACGGCGGGGGCGATGCAGACTGGTACTCGCTT
GGCACCTGTGTCGACGACGAGCGACGGGCAAGCGGGGCGGCCGGCGGCAG
CGGCGGCAGCGGCAGCGGAGGGTGGGGCCACTTCGGGCGAGGGCAAGGGC
GAGGGCGAGGCCGAGGCCGGAGAGGGGGGGCGTGGGGTGGAGGCAGCAGC
CGTGAGCAACACCGCCGCTGCCGGTTCTTCTGTCGGAGAGGAAGGGGGTG
GAGATGTCGAGTGGTGCCCCCTTGCGGCGAGGGCTAGGGCGTGTGAGGCG
GTCCCCCAGCTGTCCGAAGCGTTCCGGAAGTTTGACGAGAAGCATCCGGG
TGCCACCATCATCTACCTCGCACACTCCGGGTCCCGCATGTACGGCACCA
GCACGCCAACGTCGGACGTTGACGTGAAGGGGATCTTCATCCCGGATAGT
CGCAAGGAGGCCGAGGCGAAGGCCCGCGTCAAGGAGGCCACGGCGGGGGC
GCCGGTCGAGTCTGAGGATCAACTACCTCGCACACTCCGGGTCCCGCATG
TACGGCACCAGCACGCCAACGTCGGACGTTGACGTGAAGGGGATCTTCAT
CCCGGATAGTCGCAAGGAGGCCGAGGCGAAGGCCCGCGTCAAGGAGGCCA
CGGCGGGGGCGCCGGTCGAGTCTGAGGATCAAGATGTACAGGTGGGCCCG
GAGGTGGAGGGATCCGAGGGCGTAACCCGCCCTCCCAGCCAGCCCCAGGT
GGCGGGCGACAGCAGCTCGAAGGAAGACAAAGGGGTTACCTTCTGGTACT
CCACCGGAGACACCAGGTCCACCAACACGAAGGACGACATCGACATGGAG
CTCATCAGCGTCGGCAGGTTTTTCGGCCAGGATGTACAGGTGGGCCCGGA
GGTGGAGGGATCCGAGGGCGTAACCCGCCCTCCCAGCCAGCCCCAGGTGG
CGGGCGACAGCAGCTCGAAGGAAGACAAAGGGGTTACCTTCTGGTACTCC
ACCGGAGACACCAGGTCCACCAACACGAAGGACGACATCGACATGGAGCT
CATCAGCGTCGGCAGGTTTTTCGGCCAGCTGCTCCGGGGCGAGGTTGGCG
GCGTGGAGACACTCCACTCCATGCTGGTGGAGGACATCTGCCTCATCTCA
GATCCCGACCTGCTCCGGGGCGAGGTTGGCGGCGTGGAGACACTCCACTC
CATGCTGGTGGAGGACATCTGCCTCATCTCAGATCCCGACATTGTGCCGC
TCATCGTGCGGGAGCGGCGTTGGCTGGTTTGCAAGCAGCTCTCCAGCTGG
GTCGGCTTCGTCCTGAGCCACCTCAACAAGTACAGGAAGGTCACGCACCG
GTCCGCCGTGGCAAAACGCAAGACCGTGCAGCGGATTCGCGAGCACAACG
CCGCCCTCCTTAAGGAGGCCAGACTTGCTGCCGCCGCCGCCGCTGAGCCG
GTCTCGGCGGCCGGGGCGGCGGCTCCGACCTCAACGCTGCCGTTGCCGTC
TGTCTCGTCCTCGACTCCGGCAGTCTCGGCTCCGGTAGGCGAAGAAGGCG
GCAAGGGCGGAGAGGCTCCGGCGGGGCCGCTAGCAGCGCCAGCAGCAGCG
GCGGCGGCGGCGGCAGGCGAAGAGACAGCCGGCGCCAAAGCCGTGAGGAA
AACGCCGTCACCGGGTGTTGCGTCCGGGAGCGGGGGCATTGTGCCGCTCA
TCGTGCGGGAGCGGCGTTGGCTGGTTTGCAAGCAGCTCTCCAGCTGGGTC
GGCTTCGTCCTGAGCCACCTCAACAAGTACAGGAAGGTCACGCACCGGTC
CGCCGTGGCAAAACGCAAGACCGTGCAGCGGATTCGCGAGCACAACGCCG
CCCTCCTTAAGGAGGCCAGACTTGCTGCCGCCGCCGCCGCTGAGCCGGTC
TCGGCGGCCGGGGCGGCGGCTCCGACCTCAACGCTGCCGTTGCCGTCTGT
CTCGTCCTCGACTCCGGCAGTCTCGGCTCCGGTAGGCGAAGAAGGCGGCA
AGGGCGGAGAGGCTCCGGCGGGGCCGCTAGCAGCGCCAGCAGCAGCGGCG
GCGGCGGCGGCAGGCGAAGAGACAGCCGGCGCCAAAGCCGTGAGGAAAAC
GCCGTCACCGGGTGTTGCGTCCGGGAGCGGGGGC
back to top