mRNA_L-elsbetiae_contig7092.15896.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig7092.15896.1
Unique Name	mRNA_L-elsbetiae_contig7092.15896.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: D7FYE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE1_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 3.330e-91
Identity = 141/213 (66.20%), Postives = 161/213 (75.59%), Query Frame = 1

Query:  283 RTPFYLTLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEKPLDEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEPGGSGGWTEYTLYRTTLDHYGVFDSLHAVGPTKLLGDGSVWYAGQFDAWNITAAFDEDPAAFVVVQSTAQAGVSRVLEKIGYGLDAEGGEERGP-TSSGLPKALRRRILHQM 918
            +TPFYLTLDADVLCSKD L+EEDLLPQGKGNYVPEGR+VH  WWS+AA  LGVEE P+  GFGVTPAVLSTRGA L  ERL+ VHG   FLR +LD    EPG    W+EYTLYRT LDH+GVFD+ HA GPT LLG+ SVW++ QF+AWN+TAAFD+DPAAFVVVQST   GV+ V+ KI  GL+    EE  P T  G   +LRRRI   M
Sbjct:   27 QTPFYLTLDADVLCSKDQLTEEDLLPQGKGNYVPEGRNVHPAWWSEAAKTLGVEENPIGGGFGVTPAVLSTRGAALALERLRAVHGKEGFLRTVLDGWWVEPGR--WWSEYTLYRTALDHWGVFDTFHATGPTALLGETSVWFSEQFEAWNVTAAFDDDPAAFVVVQSTTDVGVTGVMRKINRGLE----EEHDPLTPLGAASSLRRRIARGM 233

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A6H5JS78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS78_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.280e-61
Identity = 105/178 (58.99%), Postives = 122/178 (68.54%), Query Frame = 1

Query:  385 EGRDVHSTWWSDAALHLGVEEKPLDEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEPGGSGGWTEYTLYRTTLDHYGVFDSLHAVGPTKLLGDGSVWYAGQFDAWNITAAFDEDPAAFVVVQSTAQAGVSRVLEKIGYGLDAEGGEERGPTSSGLPKALRRRILHQM 918
            E R+VH  WWS+AA  LGV E P  EGFGVTPAVLSTRGA L  ERL+ VHG   FLR ILD    EPG    W+EYTLYRT LDH+GVFD  H  GPT LLG+ SVW++ QF+AWN++AAFD+D AAFVVVQST   GV+ +  KI  GL+    EE  P+  G   +LRRRI   M
Sbjct:    9 ERRNVHPAWWSEAAKTLGVVENPTSEGFGVTPAVLSTRGATLALERLRAVHGEEGFLRTILDGWWVEPGR--WWSEYTLYRTALDHWGVFDIFHTTGPTTLLGETSVWFSEQFEAWNVSAAFDDDAAAFVVVQSTTDVGVTGITRKINRGLE----EEHDPSPGGA-SSLRRRIARGM 179

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A835YYB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 9.680e-25
Identity = 83/268 (30.97%), Postives = 116/268 (43.28%), Query Frame = 1

Query:  229 WYPYSLQMILKLLASSLVRTPFYLTLDADVLCSKDGLSE---EDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEKPLDEG--------------------FGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEPGGSGG---------------WTEYTLYRTTLDHYGVFDSLHA------------------VGPTKLLGDGSVWYAGQFDAWNITAAFDEDPAAFVVVQSTAQAGVSRVLEKIGYGLDAEGGEERG 864
            W  Y++QM++KLLA+ LV T FYLTLDADV+ +  G +    + LLP  +G Y  E R VH+ WW+ +   L +                            FGVTPAVLST GA L   RL+  +G  ++   +LD+  +    +                 W+EYTLYR  LDH+G+F++LH                         L     W+      W+  AAF +    F VVQSTA   V+ +   +   LD   G   G
Sbjct:   63 WSGYAVQMLMKLLAAQLVPTDFYLTLDADVVLTFGGGASAALDALLPLPRGAYANEPRAVHAAWWAASQRVLQLPSSSXXXXXXXXXXXXXXXXXXXXXXXXFGVTPAVLSTPGALLTLGRLKAQYGEQTYAAALLDAWTTGTAPAAXXXXXXXXXXXXXAWLWSEYTLYRLALDHFGLFEALHVDTSMAAAEVXXXXXXXXXXXALPRLSAHDAWFPEDLP-WDAAAAFADAGHVFSVVQSTAGGDVAALWRAVRQQLDRRRGGAAG 329

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A7Y2IJR7_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y2IJR7_9ACTN)

HSP 1 Score: 100 bits (248), Expect = 6.610e-21
Identity = 73/222 (32.88%), Postives = 102/222 (45.95%), Query Frame = 1

Query:  229 WYPYSLQMILKLLASSLVRTPFYLTLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEKPL--------------DEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEPGGSGGWTEYTLYRTTLDHYGVFDSLH-AVGPTKLLGDGS-VWYAGQFDAWNITAAFDE--DPAAFVVVQSTAQAGVSRVLEKIGYGLD 840
            WY    Q I+KL+A+    TPFYLTLDADV+C K  +S  DL+P G+       R  HS WW  +A  LGV  +                  G  VTPAVLST     +   ++          R     ++   G   +TEYTLY   L+  G+ D +H    P    G G+ VW A QF+AW++   F +   P  F V Q+      ++V ++I   L+
Sbjct:   81 WYR---QQIIKLIAADRFATPFYLTLDADVICCKP-VSYSDLVPGGRAAITMTSRSAHSDWWYQSAAILGVRVRVRRLAPRIWRPRWWMSQPGMSVTPAVLSTLHVRELMREIE----------RKWKKPVARVLGDRPFTEYTLYYLYLESNGLVDVVHDRERPVSCRGQGANVWSADQFNAWDVGRLFGDLRQPGFFTVCQAGKGIATAQVWDRIAPRLE 288

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A7Y2M003_9MICO (Uncharacterized protein n=2 Tax=Microbacterium ulmi TaxID=179095 RepID=A0A7Y2M003_9MICO)

HSP 1 Score: 90.1 bits (222), Expect = 5.510e-17
Identity = 62/190 (32.63%), Postives = 93/190 (48.95%), Query Frame = 1

Query:  247 QMILKLLASSLVRTPFYLTLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTWWSDAA--LHLGVEEKPLDEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEPGGSGGWTEYTLYRTTLDHYGVFDSLHAV---GPTKLLGDGSVWYAGQFDAW----NITAAFDED-PAAFVVVQS 786
            Q ++KL A ++VRTP+++TLDADV+ ++  +  E LLP G+  +  E    H  WW ++A  L  G+        FGVTPA++       + ER++  H    + R ++D +        GWTEYTLY T +   G  D+L+     G      +GSVW      +      +   F  D P AF V QS
Sbjct:   95 QQVIKLAAPAVVRTPWFITLDADVVAARP-VDREFLLPGGRALWQQESAGAHMDWWRNSARVLRSGLVIDSDQPVFGVTPAIMHAPSLVALGERIEREHPGMHWTRTLMDLA------DEGWTEYTLYWTHVLDTGAADALYTASGDGDRPYSLNGSVWVGDHLSSRALRDQLADVFSPDAPHAFFVFQS 277

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A482SN02_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN02_9ARCH)

HSP 1 Score: 90.9 bits (224), Expect = 6.310e-17
Identity = 66/165 (40.00%), Postives = 82/165 (49.70%), Query Frame = 1

Query:  214 KVESWW-YPYSLQMILKLLASSLVRTPFYLTLDADVLCSKD-GLSEEDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEKPLDEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRR--ILDSS-------------LSEPGGSGG--WTEYTLYRTTLDHYGV 651
            K E W  +PY LQM +KLLA+  V T +YL LDADV   +   LS+       +  Y  E   VHS WW  +   LG+        FGVTPA+LST G+ L  + ++    S +   +  I DSS             L   G  GG  WTEYTLYRT LDHY V
Sbjct:  206 KPERWTIFPYGLQMAIKLLAAQHVHTSYYLVLDADVFLLRPFELSQLIAAEPPRAVYRREPWSVHSLWWQGSRALLGLGGVDTRASFGVTPALLSTWGSMLTTQHIKAALCSRASSNQCAIGDSSCAAQCSALYEEMWLDSFGRVGGTIWTEYTLYRTVLDHYNV 370

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: UPI0019382A54 (DUF6492 family protein n=1 Tax=Venatorbacter cucullus TaxID=2661630 RepID=UPI0019382A54)

HSP 1 Score: 83.2 bits (204), Expect = 1.170e-14
Identity = 72/287 (25.09%), Postives = 124/287 (43.21%), Query Frame = 1

Query:    7 IFRDFFVIVPTEEISEIEAILRHSIVDNSSNGKLFRAIIEPLLLQYTTTSAALLMVDERELLRTAGGVEKVESWWYPYSLQMILKLLASSLVRTPFYLTLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEKPLDE--GFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSL-SEPGG-------SGGWTEYTLYRTTLDHYGVFDSLHAVGPTKLLGDGSVWYAGQ---FDAWNITAAF-DEDPAAFVVVQSTAQAGVSRVLEKI 825
            +F +F+V+VP +E+                       +++    ++ T    ++++ E +LL       K+  W      Q ++K+ AS L+ + FYLT DAD++  +   SE+DL+  GK     E R+ H  WW  +A  L    K  D+  G  VTPA+L+T+  + +   +Q+     ++   I +  + S P            WTEY+LY      + +FD  H    T  L    + +      +D W+   +F D +P  F ++ S        V EKI
Sbjct:   38 LFSEFYVVVPDDEV----------------------ILVKETFSRWNTLP--IIVIPESQLLPELKNYPKMRGW----RKQQLIKIAASKLISSDFYLTFDADIVALRK-FSEKDLIVSGKAILQYEPRNRHPKWWKASARLLKTSHKIGDKTRGMSVTPAILATKICQKLMTDIQSQSKKYTWAEIICNLHIPSNPRNWWIGNYLKLKWTEYSLYYLCSQKHDLFDRYHIEAGTDSLPQ--LLFVNDTLDYDNWDPANSFIDTNPGLFCIIGSKTATNPKNVWEKI 293

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A7S0MTN8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MTN8_9CHLO)

HSP 1 Score: 76.6 bits (187), Expect = 2.330e-13
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 1

Query:  238 YSLQMILKLLASSLVRTPFYLTLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEK-PLDEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEP-GGSGGWTEYTL 621
            Y LQM++KL A+ LV TPFY+TLD+DVL ++      DL+  G+G Y  +  + H  WW  +   L   +  P     GVTPAVLST+ +  +   ++ +H       R  D++L E   G   WTEYTL
Sbjct:   40 YRLQMLVKLAAAILVETPFYVTLDSDVLLTRR-TRFSDLVVDGRGVYQHDPGNQHGNWWDASKQVLRTTDGCPRQLEGGVTPAVLSTQVSRELLAHIERLHKG-----RAWDAALFEQLEGGADWTEYTL 163

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A2T1DEY1_9CYAN (Uncharacterized protein n=2 Tax=Phormidesmis priestleyi TaxID=268141 RepID=A0A2T1DEY1_9CYAN)

HSP 1 Score: 79.3 bits (194), Expect = 3.300e-13
Identity = 70/249 (28.11%), Postives = 102/249 (40.96%), Query Frame = 1

Query:  169 MVDERELLRTAG--GVEKVESWWYPYSLQMILKLLASSLVRTPFYLTLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTW--WSDAALHLGVEEKPLDEGFGVTPAVLSTRGAELVFERLQTVHGSASF------------------------LRRILDSSLSEPGGSGGWTEYTLYRTTLDHYGVFDSLHA-VGPTKLLGDGSVWYAGQFDAWNITAAFD-EDPAAFVVVQSTAQAGVSRVLEKI 825
            +V E ++ R++    + K    W+    Q I+K+  +  + T FYLTLDADV+C+K  +  EDL+  G+          H  W  W++  L +    + L     VTPAVLS +    +   L  V+    F                        LR  L S  S       WTEY LY   L+    FD  H  V       D SVWY   F++W++   F  E    FV+VQ      +  V +K+
Sbjct:   77 LVPEFKIFRSSNRFSIFKSVPGWFK---QQIIKIAIADKIETDFYLTLDADVICTKP-VYFEDLIKDGRAVCYIHQTHTHHDWYGWAEEVLKMTARSRELLHN--VTPAVLSKQAMLELQTYLTQVYHKTKFPLRRRDLKVVALKFLTTFLPKKSTLRHQLLSWRSYLSVCTPWTEYGLYYIFLEETNRFDKYHIEVTDPIYTNDDSVWYKETFESWDVEKVFSPESSHFFVIVQGWLDLDIQEVWQKV 319

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BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Match: A0A5J4Y4R3_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4R3_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 1.020e-8
Identity = 52/201 (25.87%), Postives = 86/201 (42.79%), Query Frame = 1

Query:  229 WYPYSLQMILKLLASSLVRTPFYLTLDADVLCSKDGL-------------------SEEDLLPQGKGNYVPEG---RDVHSTWWSDAALHLGVEEK-PLDEGFGVTPAVLST----RGAELVFERLQTVHGSASFLRRILDSSLS------EPGGSGGWTEYTLYRTTLDHYGVFDSLHAVGPTKLLGDGSVWYAGQFDAW 732
            W  ++ Q ++KL  ++L++TPFYL LDADV  ++                      S++ +  + K +  P      D H  WW ++A  L ++ +   +   GVTP +L+T    +  + +  R Q     A  L    D +        E      WTEY++Y     H  VF+  HA   + +L   +VW   Q+D W
Sbjct:  149 WPGWTRQQVVKLACANLIKTPFYLVLDADVFAARRAHALDLFVTDPCDHQAHHICDSQQSISYRCKNDCYPMAGGEEDWHMRWWRNSAETLQLDVRFDWEYAIGVTPQILATDISLQLGQYIQNRFQVDSWVAYLLEVFADRNQRNWDANHELQHDPAWTEYSIYYVFAQHAQVFEIYHAT--SIVLQQSAVWTQEQYDTW 347

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig7092.15896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
D7FYE1_ECTSI	3.330e-91	66.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JS78_9PHAE	1.280e-61	58.99	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YYB4_9STRA	9.680e-25	30.97	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7Y2IJR7_9ACTN	6.610e-21	32.88	Uncharacterized protein n=2 Tax=Acidimicrobiia Tax...	[more]
A0A7Y2M003_9MICO	5.510e-17	32.63	Uncharacterized protein n=2 Tax=Microbacterium ulm...	[more]
A0A482SN02_9ARCH	6.310e-17	40.00	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
UPI0019382A54	1.170e-14	25.09	DUF6492 family protein n=1 Tax=Venatorbacter cucul...	[more]
A0A7S0MTN8_9CHLO	2.330e-13	38.46	Hypothetical protein (Fragment) n=1 Tax=Pyramimona...	[more]
A0A2T1DEY1_9CYAN	3.300e-13	28.11	Uncharacterized protein n=2 Tax=Phormidesmis pries...	[more]
A0A5J4Y4R3_9CHLO	1.020e-8	25.87	Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig7092	contig	L-elsbetiae_contig7092:3741..9432 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	86.7
Seed ortholog evalue	2.1e-14
Seed eggNOG ortholog	1218076.BAYB01000038_gene5538
Hectar predicted targeting category	other localisation
EggNOG OGs	1K62X@119060,1NU95@1224,2DUFP@1,2WAZZ@28216,33QF7@2
Best tax level	Burkholderiaceae
Best eggNOG OG	NA\|NA\|NA
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-08_003680.1
Exons	6
Model size	918
Cds size	918
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig7092.15896.1	prot_L-elsbetiae_contig7092.15896.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig7092 3741..9432 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622816786.9061499-CDS-L-elsbetiae_contig7092:3740..3906	1622816786.9061499-CDS-L-elsbetiae_contig7092:3740..3906	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 3741..3906 +
1691683812.8798432-CDS-L-elsbetiae_contig7092:3740..3906	1691683812.8798432-CDS-L-elsbetiae_contig7092:3740..3906	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 3741..3906 +
1622816786.9204302-CDS-L-elsbetiae_contig7092:4152..4268	1622816786.9204302-CDS-L-elsbetiae_contig7092:4152..4268	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 4153..4268 +
1691683812.8994648-CDS-L-elsbetiae_contig7092:4152..4268	1691683812.8994648-CDS-L-elsbetiae_contig7092:4152..4268	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 4153..4268 +
1622816786.9327118-CDS-L-elsbetiae_contig7092:4597..4704	1622816786.9327118-CDS-L-elsbetiae_contig7092:4597..4704	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 4598..4704 +
1691683812.9209256-CDS-L-elsbetiae_contig7092:4597..4704	1691683812.9209256-CDS-L-elsbetiae_contig7092:4597..4704	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 4598..4704 +
1622816786.9429684-CDS-L-elsbetiae_contig7092:5085..5298	1622816786.9429684-CDS-L-elsbetiae_contig7092:5085..5298	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 5086..5298 +
1691683812.9339488-CDS-L-elsbetiae_contig7092:5085..5298	1691683812.9339488-CDS-L-elsbetiae_contig7092:5085..5298	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 5086..5298 +
1622816786.9528873-CDS-L-elsbetiae_contig7092:5978..6130	1622816786.9528873-CDS-L-elsbetiae_contig7092:5978..6130	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 5979..6130 +
1691683812.9452553-CDS-L-elsbetiae_contig7092:5978..6130	1691683812.9452553-CDS-L-elsbetiae_contig7092:5978..6130	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 5979..6130 +
1622816786.9696321-CDS-L-elsbetiae_contig7092:9268..9432	1622816786.9696321-CDS-L-elsbetiae_contig7092:9268..9432	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 9269..9432 +
1691683812.9564905-CDS-L-elsbetiae_contig7092:9268..9432	1691683812.9564905-CDS-L-elsbetiae_contig7092:9268..9432	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig7092 9269..9432 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig7092:3741..9432+
coding sequence from alignment at L-elsbetiae_contig7092:3741..9432+

protein sequence of mRNA_L-elsbetiae_contig7092.15896.1

>prot_L-elsbetiae_contig7092.15896.1 ID=prot_L-elsbetiae_contig7092.15896.1|Name=mRNA_L-elsbetiae_contig7092.15896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp
MEIFRDFFVIVPTEEISEIEAILRHSIVDNSSNGKLFRAIIEPLLLQYTT
TSAALLMVDERELLRTAGGVEKVESWWYPYSLQMILKLLASSLVRTPFYL
TLDADVLCSKDGLSEEDLLPQGKGNYVPEGRDVHSTWWSDAALHLGVEEK
PLDEGFGVTPAVLSTRGAELVFERLQTVHGSASFLRRILDSSLSEPGGSG
GWTEYTLYRTTLDHYGVFDSLHAVGPTKLLGDGSVWYAGQFDAWNITAAF
DEDPAAFVVVQSTAQAGVSRVLEKIGYGLDAEGGEERGPTSSGLPKALRR
RILHQM

mRNA from alignment at L-elsbetiae_contig7092:3741..9432+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig7092.15896.1 ID=mRNA_L-elsbetiae_contig7092.15896.1|Name=mRNA_L-elsbetiae_contig7092.15896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5692bp|location=Sequence derived from alignment at L-elsbetiae_contig7092:3741..9432+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAAATATTTCGAGACTTCTTCGTCATCGTCCCCACCGAAGAAATCTC
TGAAATCGAGGCGATTCTTCGCCACAGCATTGTCGACAACAGCAGCAACG
GTAAGCTCTTCAGAGCTATTATCGAGCCACTTCTTCTTCAGTACACCACC
ACCTCCGCAGCCTTGTGTGTAACAGTGATCGATACGCGGTAGATAAGACT
GCTGTCGGTATTATTGGGTGTAACTGTCTAATTGGATACGACAGTAAGGT
TCCTTTCATCGAGAAATAGTTCCTTTCGGCTTTCCCTTGAGGTTTTTCAA
GGTCGGCTGGCTGCCTGTGTGTCCGTGGGAAATGGTTGCATCCCTCGCTC
TCGCTCTCTCCCGCTCTACTATACGTTGGTTACCACGACAGATGGAGAGG
ACACGGCGATAGTGATGGTGGACGAAAGGGAGCTGCTGCGTACCGCAGGA
GGAGTGGAAAAAGTGGAATCTTGGTGGTACCCCTATTCCTTGCAGATGAT
CCTCAAGCTGCTGGCCTCTTCGCTAGTGGTACGTAACGCCTTAGATCGTG
CGCTGTGGCCTATGTCCATACGTTGTTTCGAAGGGAGTTGTTTGATCAAC
TCTTTTTGTGAACGACAGAAAGCGCTTTTTCTCCTGACCCGGACTACTGT
GGGATGAATAACCTGTAGCTCTCCGCCCGGGAGAGAGGCGACGGGCCCAC
GTACGTACAATTTTTGCATGCGCACGTCCTACGTGTTGCTGTTTTCTGTA
TTGCATGATGTGTACTACTGCATGTACTCCGTACCTGAGAACATGATACG
TACAATAGTATCATTGACGCGATAGTGTTTCTGATGCATTTCGTGTATCG
GTCGCAGAGAACGCCATTCTACCTGACGTTGGATGCCGATGTCTTGTGTT
CCAAAGATGGGCTATCGGAGGAAGACCTGCTGCCACAGGGAAAAGGGAAC
TATGTTCCTGAAGGGTAAGCACCTACACAACGGCACAAAATCCAGTCGAA
TAACAGTAGCAGAGACGGGGCCCCAAAGAGGGAGAACGTAGCTGGTATTG
GAAGCTTCGAAAATGATCGGTTTGCTTTCACCCGTTGTGGACTTCAGATG
CATTCCGTCCAGCCCGCTCATCGTGCATCAAGGTATTTGTTATTTACAAG
TTTTTATCGAAGATACTTTGAAGGGCCAATGCATGGTTTGGCTACTGCTG
CTGCTTATTATGCCACCCCCCTGCTGCATTGTCGTTGTTGATGCACGAGG
TATAGCCACCAACTGGACGCCCGGCCGATCCAAACGTGTGTCCGTCCCCA
TTCCTCACGGCCGTATCGCTCCCGCAACCCTTTGCCGACGCGAAGGAGAG
ACGTTCACTCCACGTGGTGGTCCGATGCAGCTCTGCACTTAGGCGTCGAG
GAGAAACCTCTAGACGAGGGATTTGGGGTGACCCCCGCGGTCCTCAGTAC
GAGAGGGGCTGAGCTCGTGTTTGAGCGGCTGCAAACGGTGCACGGCAGCG
CCAGTTTTCTCCGCAGAATCCTCGACAGTTCGCTGTCAGAGCCGGGCGGC
AGCGGCGGGTGGTGAGCCTTCAATAGTAGATATAGATTCAAAGATTAAAT
CGAAGTGGTGCTGCAAACAAACAACAACAACAACAAAAACAACAGGGTTA
TATATTAATGACAGAATGATCTTGCATGAACTAACGACACGTGCCGTGGA
CGAAAGGCCGGGGTTCCCTACTTTTTCAGCAAATAATGCTGGCTTCCATG
TACGAACGAGAATAATCCATCTCTGTGTTAGCCGCTCTGCCGCAGGAAGC
AACACGGGGCGCTTGCAGCCTCACGTTCATTAGATACCTCCTCCATTCCT
GCCCTGCTTGTGCCAGCTGTAGATTACCCCACTATTCTTCTTTGGGTATA
CCAGTCGAGTGGGACTGATTTCTGCCGATATGGACGATGTGGCTGCTGTT
TGTTGGCAGCGAGAAAAGTGGCGTGCTTGCGTGTGTATCTGTGTACCTCA
CTTCAAAACGCACGAAGTATTTGGTACGGACTACTGCTGTACTGGATGTT
TCTCTGTGTAGACGTATTTTTTCTCGGGATACATGCTCCATCTGTTCGCT
ACAGAACATAGAACAGACATTCCTCCTTACGCCTGTGTGTAGCTCCCGAT
CCCGATGTATGTAGATACTCAACATGCCTGTGATTAACAAGAAACAATAT
TATTGGGTTTGAAATAAGGTCTCTGTTATGAACGTCAGGTGGACGGAATA
CACCTTGTACAGAACGACGCTGGACCACTACGGCGTTTTTGACTCGCTGC
ACGCCGTCGGCCCCACGAAGCTTCTCGGCGACGGCTCGGTCTGGTACGCG
GGCCAGTTCGACGCCTGGAATATCACCGCTGCCTTTGACGGTGAGATACA
GGATATATCTGACTTGGGTAGATAGTCTACACGTCAGTGGTTTTAACGGT
GGTGATATACAGGTGAATCTATCTGACGTGGGTAGATACAGTCGTCGCCG
ATATATATTGAATGTACATACCGTTTTTTGACGACAGCAGCTTCGACTAT
ATCTAAGGCGAACATATCACTTCGATGGATGATGATGATATAAACACCTC
TAGAAACCTGCCGTCCTGCTCAGCGCTGACCGTTAGACGTTGATCGGAAC
TGTTCGATGGGTGGGTTTGGTTGCTCCGCTGTGCCCTTTGGTATCTATCT
AGATAGAAGTAGACGGTAGTGTTGTATCTAGATATACGATACCAGGCGTT
TATCAGCCCACACAGCTTCAATCGACACAAACTCAAGTGCGCCGTGACCG
CACGAGTGTCAACTATCTAGAAAAGATTTGGTTGCGTAAATCCTCCAAGT
AATTCAAAAGACATGCCGTTTAAAAAGCTCGAAATGGTACTTAGACATAT
ATTTGGCTTACGTAGGGCACCGGGCGTTTCTCAGCCCACACAGCTCCGAT
CGACACAAACTCAAGTGCGATGTGACCGCACAAGTGTCAGCCATCTAGAA
GATAATTGGTTGGGTATATCCGCCGAGTAATTCAAAACATATGCCGTTTA
AAGAGCTCAAAATGGTACTGGGAGCGGTGTGGTATACAAGGCTTACATAG
AACACCGGGCGTTTCTCAGCCAAGACAGATCTGGTCGATACAAACTTAGG
TGCGCTGTGACCGCACGAGTGTCAGCTCCCACGGAAGTCATCAAGCAGGA
CAATCCACTGAGCGATTGCAGAGATATGCCGTGTTCGGGGCTTACAGTAG
TAAAGGAGGGCGGTGTGATATAAAAGCTCACATACGATATCATTTATTTC
TCAGCCTACACAGCTGCGATTGTCACCAATTCAGGTGCCCTGGGCTCGCA
CGAGTCGCAGCTACCACGTACGATATCGGGCATGCCAGTTAGAGTAGATC
GCGGGTAATGCGTGAGGTACGGTATGTTAACGAGAATCATTTTTCAGTGA
GCGTGCGAGTGAATATCGAACATACACTCTTATAGTGAATCGGACCGCGT
GCTGCAAGTTCCAGGCGTGGTGCCGTTAAAGTCTGGAGTCTACGGGCGTC
CTCGTCGTATTTGAATAACGCGAAGCGCTGTATCCCGACACAGACGCTGT
TTCGTTCGAAAACAGCACTGATTAAAATTGCTGTACCCCACAACAGTACA
TGTACTTTCTCTTTTGGTGTCGGCCGAAAAAACAAACGCCCCCCTCATCG
TAGCTCTGCTGGGAGGAAGGCACATAAAGCTCCGTTTATCTTGTGAATGT
GTCGGCCTAGGCATTTTTTGCCGCTGCGGGGTGATTGAAGGATAAGGGTG
ACAATCACGCCAAGTACATCTACCACATAGACTATGTTATCTCCTTGTAC
TAATGCAGTAAACATGAACGGTGAACGGGTTTTCCACGGGTTTACCTTCT
TCTTTTCACACTGCAAATACAAATTTTATATTCAGAATGTTAGCACCCGG
TTGCTTTGCCGACGGAACCAACCGAACAGATATTGTCTACAGCATGTTAT
GCTGAAACAAACACGGTTGAGATCGACGGACGACAACAATAGTCACCTGC
GAAGGGTGGAAAAATGGTTCACGAACAGCGCCATCTATTTAGTGTGGTGT
GTTGAGCAATCAAACTGACAAGTGAACTCCCTGAAAGCAGAGTATAGTCT
AGACTATGTGCTTAGGAATGAAAACGGAGCGACAGGGTACCCCTAGATAA
AACAACATGGGACACATAGACCACTGCGGCAAGTAGTCTACTTCAAACGG
TTTTGATACTGTAAGGTGGTTACCGGCGTCGAGACACAGAGTGAGTGGGA
GGTTCACAAAATATAGATCACGCCAAATGCTGTCGGTTCTAGGTTATATA
TTGCGTTGGCGAGAAGAGCGTGTGAAGGGCGGTAGCAGCATATCGGTTAC
CAGCGACGACGATGGAAGGTTCTTGCACTCACCTCAAAAATATATCATTG
CTCGTTGCGACACTCATCGGTGCAGGAAAAGCCGGCGCATTCTGTTTCAG
AAAGCGTCACAGACAAGAATGAACCCGCACACACATTCTTCTGTGTTGGC
CGAATAGCCAGCAGAATGATACATTCGTACGCTCCAACCTTTTGCCTTCG
ACTGGGATTGGTTATGAAAAACTAAATCTTGTTATTTCATTCTCACGCAT
ACACTACTATTCTCCCACAAAAAATGAAAAGAAAATCGAGCGGAGGCGGA
TCTATGCATGCGAGTTTGGACAAGCTTGGTTTGGATCCAGACTATCTATC
TAGACTATGTAGAAAAAAAATGTAAGTCGATTACTCCACTCGCACGCTCA
GTTAAAATGATTATCGATACCATACCGTACCTCACGCACTACACACGCAA
TCTACTCTAACTGGCATGCCGCATGCCTTACGTGGTAGCAGCGACTCGTG
CGAACGTAGCGCACCTGAGTTGGTGTCGATCGCAGCTGTGTGGGCTGAGA
AACGTATATAACACTACTACCCGTAGAAGTATAGGGTTAGGTCAGGGTTA
GGGTTAGGGTGTGATGGCAGCAGGGCGACACGATATACGTGTGACATGAC
GAGAGTGAAATATTTAGGCTGGGTAGACGTCCCGATCATATGTATGTCCC
ACAGTGAAATTACTGTCTGCCTCTGTGCAGGGTATATAAACAGCAGCCTC
TCGAGCGGTGCAGGTGTGTATGTATATGTATACCGGTGATCAACATAATC
ACTCGTCCTTTTGAAATGTTAATGTTTTCAGCAAATCCTGGCACGTCCAG
CTGTTTAATTAAGGTACACTCCTCTCTTTCGACCGTTCAAACGATCAGTC
GATGGAAATGTTGTTGTACGTGATGCTGGCATTGTTTTGGGTGAAGTTTG
ACTTCGACATGGTGCGCCTCGCCGTGCTTCTCCCGGATAAACAGTCTATC
TACTGGTGCAAAAAAAGGCCCTGTTGCCTGTTGACTGTTGGTTAAAATAA
TATTAAAAGTATATATGTCGCCCCTTTTCTCTGCGTATTTTGTTTCTACA
TTCCTGACCCACGATATCACGATAACAGAGGACCCTGCGGCCTTCGTGGT
CGTGCAGTCCACCGCACAGGCCGGTGTGTCGAGGGTTTTAGAAAAAATCG
GATACGGCTTGGACGCGGAAGGCGGCGAAGAGAGAGGCCCAACATCCTCA
GGGTTGCCGAAAGCACTTCGACGCAGAATCCTTCACCAAATG

Coding sequence (CDS) from alignment at L-elsbetiae_contig7092:3741..9432+

>mRNA_L-elsbetiae_contig7092.15896.1 ID=mRNA_L-elsbetiae_contig7092.15896.1|Name=mRNA_L-elsbetiae_contig7092.15896.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1836bp|location=Sequence derived from alignment at L-elsbetiae_contig7092:3741..9432+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAAATATTTCGAGACTTCTTCGTCATCGTCCCCACCGAAGAAATCTC
TGAAATCGAGGCGATTCTTCGCCACAGCATTGTCGACAACAGCAGCAACG
GTAAGCTCTTCAGAGCTATTATCGAGCCACTTCTTCTTCAGTACACCACC
ACCTCCGCAGCCTTGTATGGAAATATTTCGAGACTTCTTCGTCATCGTCC
CCACCGAAGAAATCTCTGAAATCGAGGCGATTCTTCGCCACAGCATTGTC
GACAACAGCAGCAACGGTAAGCTCTTCAGAGCTATTATCGAGCCACTTCT
TCTTCAGTACACCACCACCTCCGCAGCCTTGTTGATGGTGGACGAAAGGG
AGCTGCTGCGTACCGCAGGAGGAGTGGAAAAAGTGGAATCTTGGTGGTAC
CCCTATTCCTTGCAGATGATCCTCAAGCTGCTGGCCTCTTCGCTAGTGTG
ATGGTGGACGAAAGGGAGCTGCTGCGTACCGCAGGAGGAGTGGAAAAAGT
GGAATCTTGGTGGTACCCCTATTCCTTGCAGATGATCCTCAAGCTGCTGG
CCTCTTCGCTAGTGAGAACGCCATTCTACCTGACGTTGGATGCCGATGTC
TTGTGTTCCAAAGATGGGCTATCGGAGGAAGACCTGCTGCCACAGGGAAA
AGGGAACTATGTTCCTGAAGGAGAACGCCATTCTACCTGACGTTGGATGC
CGATGTCTTGTGTTCCAAAGATGGGCTATCGGAGGAAGACCTGCTGCCAC
AGGGAAAAGGGAACTATGTTCCTGAAGGGAGAGACGTTCACTCCACGTGG
TGGTCCGATGCAGCTCTGCACTTAGGCGTCGAGGAGAAACCTCTAGACGA
GGGATTTGGGGTGACCCCCGCGGTCCTCAGTACGAGAGGGGCTGAGCTCG
TGTTTGAGCGGCTGCAAACGGTGCACGGCAGCGCCAGTTTTCTCCGCAGA
ATCCTCGACAGTTCGCTGTCAGAGCCGGGCGGCAGCGGCGGGAGAGACGT
TCACTCCACGTGGTGGTCCGATGCAGCTCTGCACTTAGGCGTCGAGGAGA
AACCTCTAGACGAGGGATTTGGGGTGACCCCCGCGGTCCTCAGTACGAGA
GGGGCTGAGCTCGTGTTTGAGCGGCTGCAAACGGTGCACGGCAGCGCCAG
TTTTCTCCGCAGAATCCTCGACAGTTCGCTGTCAGAGCCGGGCGGCAGCG
GCGGGTGGACGGAATACACCTTGTACAGAACGACGCTGGACCACTACGGC
GTTTTTGACTCGCTGCACGCCGTCGGCCCCACGAAGCTTCTCGGCGACGG
CTCGGTCTGGTACGCGGGCCAGTTCGACGCCTGGAATATCACCGCTGCCT
TTGACGGTGGACGGAATACACCTTGTACAGAACGACGCTGGACCACTACG
GCGTTTTTGACTCGCTGCACGCCGTCGGCCCCACGAAGCTTCTCGGCGAC
GGCTCGGTCTGGTACGCGGGCCAGTTCGACGCCTGGAATATCACCGCTGC
CTTTGACGAGGACCCTGCGGCCTTCGTGGTCGTGCAGTCCACCGCACAGG
CCGGTGTGTCGAGGGTTTTAGAAAAAATCGGATACGGCTTGGACGCGGAA
GGCGGCGAAGAGAGAGGCCCAACATCCTCAGGGTTGCCGAAAGCACTTCG
ACGCAGAATCCTTCACCAAATGAGGACCCTGCGGCCTTCGTGGTCGTGCA
GTCCACCGCACAGGCCGGTGTGTCGAGGGTTTTAGAAAAAATCGGATACG
GCTTGGACGCGGAAGGCGGCGAAGAGAGAGGCCCAACATCCTCAGGGTTG
CCGAAAGCACTTCGACGCAGAATCCTTCACCAAATG