mRNA_L-elsbetiae_contig708.15885.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: D7G8M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8M9_ECTSI) HSP 1 Score: 143 bits (360), Expect = 1.060e-35 Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 3 Query: 78 SDDCTAGARFALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDAWSETCMGPQIDINAWIIASDGTLRFFRTQDAKAFFLEDEDEYTEAGDSRWASWFGD-----DSTAYPFDVSCFCTVDTC 542 + +C A+ ++G DL YFS+E V G + + Y GY+F F SA N A+FEESP +Y+P WGGFCS+GI ED W+ +GP D N W+I DG L FFR++ + FL D AG+ W SW+GD D P D CFC+ +TC Sbjct: 92 TSECATAAKVVMEGADLTRYFSLELGAAAVYGVEEHEALYN-GYKFWFESAENKAMFEESPKSYIPQWGGFCSWGISREDWWNADELGPPADPNQWLITDDGGLHFFRSELPMSKFLGDVPGNIVAGNQIWHSWWGDVEPAADGAGSPLDTDCFCSTETC 250
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A7S4EDU7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EDU7_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.580e-20 Identity = 61/168 (36.31%), Postives = 79/168 (47.02%), Query Frame = 3 Query: 108 ALQGVDLVAYFSMEEEDEPVVGSPSY------VSTYGDGYE--FQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDA----------------------WSETCMGPQIDINAWIIASDGTLRFFRTQDAKAFFLEDEDEYTEAGDSRWASWFGDDSTAYPFDVSC 521 A+ GVD+VA+FS+EE PV GS Y G+ YE F F+SA + A F +P YLP +GGFCSYG+ E W+ MGP + WII DG L F + A FL+D + + D RWA+W+GD P V C Sbjct: 229 AVGGVDVVAFFSLEEGASPVEGSSKYPFQLTTTDDRGNNYESTFHFASALSRATFAANPAKYLPAYGGFCSYGMAFERGPDHEEWGGTVGMDVAAPEEGWPWAADVMGPPTSVENWIIR-DGRLYFAFLPEVMAAFLDDFETNRQRADERWAAWYGDGDLTGPVSVDC 395
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A7S3UXT1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXT1_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 8.810e-19 Identity = 54/134 (40.30%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 117 GVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDAWS-ETCMGPQIDINAWIIASDGTLRFFRTQDAKAFFLEDEDEYTEAGDSRWASWFGDDSTAYPFDV 515 G D+VAYF ++ + V+GSP + S Y GY F FS+ N FE SP TY+P WGGFCSYG+ E W+ ET AW + DG L F D A F + GD+ W +W D A F+V Sbjct: 97 GYDVVAYFDLDPLSDGVLGSPEFTSIYK-GYTFYFSTRENQDRFESSPETYVPAWGGFCSYGVSQESWWTAETMRAGVYASGAWRVV-DGRLFLFHDPDVAALFAGLLPDAVRQGDAVWGAWGLDGFNAGCFNV 228
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A6V1P5D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P5D3_HETAK) HSP 1 Score: 94.4 bits (233), Expect = 1.070e-16 Identity = 61/175 (34.86%), Postives = 96/175 (54.86%), Query Frame = 3 Query: 63 KEIDGS-DDCTAGARFALQG-VDLVAY----FSMEE--EDEPVVGSPSYVSTY---GDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMED------AWSETCMGPQIDINAWIIASDGTLRFFRTQDAKAFFLEDEDEYTEAGDSRWASWFGDDSTAYPFDVSCFCTVD 536 K +DGS C + A + L G +DLV++ EE EP GS + +T F+SA N ALFEE P Y+P +GGF ++ +P+++ A+SE +GP ++ N W + D L FFR++ + +F++D ++ AGD RW +WFG+ + F+ CF T+D Sbjct: 535 KSVDGSLSTCCSRAEYPLLGGLDLVSFRVPPAGAEEGMAAEPTFGSSEHAATVELPNGVVTAYFASAENQALFEEDPWLYMPAFGGFDAFAVPLQNTFESPTAFSE--LGPAVNFNQWAVVED-RLYFFRSEMNRRWFMDDPQDFVAAGDLRWTTWFGEQNGI--FNTHCF-TLD 703
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A7S2V0M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0M0_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 9.730e-16 Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 3 Query: 48 CPDMVKEIDGSDDCTAGARFA-LQGVDLVAYFSMEEEDEPVVGSPSYVS---TYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMED----AWSETCMGPQIDINAWIIASDGTLRFFRTQDAKAFFLEDEDEYTEAGDSRWASWFGDDSTAYP--FDVSCF 524 C D KE C +A L GVD+V +++ E D P +G Y + T Y F F + NL F+E P +Y P WGGFC YG+ +E+ A +GP +D+++W I G L FF A+ F+ GD W +++ D + Y F+ +CF Sbjct: 55 CGDEYKEF--RTLCCCDPEYAVLGGVDVVEMYNLYEFDLPKIGDEQYAAYLPTSSGFYRFLFINEENLETFKEDPWSYAPAWGGFCGYGVALEEKSYAADFVKTLGPFVDLSSWAIKG-GRLYFFGGSGARLKFIVYGSHAVALGDENWGTYY-DSGSHYDGHFNTNCF 219
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A7S2FZR2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZR2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.160e-13 Identity = 44/139 (31.65%), Postives = 68/139 (48.92%), Query Frame = 3 Query: 108 ALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDAWSETCMGPQIDINAWIIASDGTLRFFRTQDAKAFFLEDEDEYTEAGDSRWASWFGDDSTAYPFDVSCF 524 A+ G DLV YFS+E G+ + ST+ GY F+F + +N+ F PT+YLP +GGF +Y I + ++ +GP + N W I D F + F + + G+ RW + F D T Y + C+ Sbjct: 84 AMDGYDLVEYFSLESGANGRKGTEEFESTFA-GYTFRFLNNKNMKAFGSMPTSYLPQFGGFDAYSISEDPWYTADTLGPGANPNVWKILDDKLYFFMFDTTMEKFQKGNMSATVKTGNERWDAMF--DDTEYGLNTGCY 219
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A2G1BVG7_9FLAO (YHS domain-containing protein n=7 Tax=Tenacibaculum TaxID=104267 RepID=A0A2G1BVG7_9FLAO) HSP 1 Score: 72.4 bits (176), Expect = 1.890e-11 Identity = 31/67 (46.27%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 105 FALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGI 305 + +G D+V+YF+ DEPV G + +TY DG +F+FSS +NL+LF+E+PT Y+P +GG+C+Y + Sbjct: 29 YVAEGYDVVSYFT---NDEPVEGKKKFQTTY-DGAKFKFSSEKNLSLFKENPTKYIPQYGGYCAYAV 91
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A7S2XXY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 8.120e-11 Identity = 40/104 (38.46%), Postives = 57/104 (54.81%), Query Frame = 3 Query: 90 TAGARFALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDAWSETCMGPQIDINAWIIASDGTLRFFR 401 TAG L+G D+ +YF+ EPVVG + + Y +GY F F S ++FE SP ++LP WGGFC+YG+ E W+ + D + I + G L FR Sbjct: 27 TAGP--VLEGWDVTSYFN----GEPVVGDAEHSAIY-EGYIFHFKSELTKSMFEYSPASFLPQWGGFCAYGVAWEKWWNAETLHAPGDPQIYSIIN-GKLYIFR 122
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A420E4Q4_9FLAO (YHS domain-containing protein n=2 Tax=Tenacibaculum TaxID=104267 RepID=A0A420E4Q4_9FLAO) HSP 1 Score: 70.5 bits (171), Expect = 8.270e-11 Identity = 44/127 (34.65%), Postives = 69/127 (54.33%), Query Frame = 3 Query: 105 FALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDAWSETCMGPQIDINAWIIA-SDGTLRFFR----TQDAKAFFLEDEDEYTEAGDSRW 470 + +G D+V+YF+ + P+ G+ Y S Y DG +F+FSS +NLALF+E+PT Y+P +GG+C+Y I +T G ++ IN DG L F T K + E+ ++ + D W Sbjct: 29 YIAEGYDVVSYFNKK----PLEGNKKYQSIY-DGVKFKFSSEKNLALFKENPTKYIPQYGGYCAYAI------GKT--GEKVSINPKTFEIRDGKLYLFYNSWGTNTLKLWLKENPEQLKKQADINW 142
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Match: A0A3E0DC15_9GAMM (YHS domain-containing protein n=1 Tax=Marinomonas pollencensis TaxID=491954 RepID=A0A3E0DC15_9GAMM) HSP 1 Score: 67.8 bits (164), Expect = 6.710e-10 Identity = 36/91 (39.56%), Postives = 54/91 (59.34%), Query Frame = 3 Query: 108 ALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGYEFQFSSARNLALFEESPTTYLPGWGGFCSYGIPMEDAWSETCMGPQIDINAWIIASD 380 AL+G D VAYF+ + PV G +VS Y G ++ FSSA NLALFE++P Y P +GG+C++ + + A++ D + W I +D Sbjct: 30 ALKGYDTVAYFTQHK---PVKGDAQFVSEYK-GADWYFSSAENLALFEQNPKKYAPQYGGYCAWAVAEKRAFAPA------DPHQWAIVND 110 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig708.15885.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig708.15885.1 >prot_L-elsbetiae_contig708.15885.1 ID=prot_L-elsbetiae_contig708.15885.1|Name=mRNA_L-elsbetiae_contig708.15885.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp MVKEIDGSDDCTAGARFALQGVDLVAYFSMEEEDEPVVGSPSYVSTYGDGback to top mRNA from alignment at L-elsbetiae_contig708:28675..32734- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig708.15885.1 ID=mRNA_L-elsbetiae_contig708.15885.1|Name=mRNA_L-elsbetiae_contig708.15885.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4060bp|location=Sequence derived from alignment at L-elsbetiae_contig708:28675..32734- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig708:28675..32734- >mRNA_L-elsbetiae_contig708.15885.1 ID=mRNA_L-elsbetiae_contig708.15885.1|Name=mRNA_L-elsbetiae_contig708.15885.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=978bp|location=Sequence derived from alignment at L-elsbetiae_contig708:28675..32734- (Laminarionema elsbetiae ELsaHSoW15)back to top |